EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000007137 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 3353 bases
Position: chrscaffold_107397:27-3379
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006319	zf-RanBP	PF00641.18	8.5e-34	1	4
ENSCHOP00000006319	zf-RanBP	PF00641.18	8.5e-34	2	4
ENSCHOP00000006319	zf-RanBP	PF00641.18	8.5e-34	3	4
ENSCHOP00000006319	zf-RanBP	PF00641.18	8.5e-34	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000007149	-	3276	-	ENSCHOP00000006319	1092 (aa)	-	UPI0001F9F6E4

Gene Model

Click here to download ENSCHOG00000007137's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000007137's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000007137	-	100	96.245	ENSCHOG00000003510	-	91	96.245
ENSCHOG00000007137	-	78	96.495	ENSCHOG00000009608	-	100	96.495
ENSCHOG00000007137	-	71	83.746	ENSCHOG00000013388	-	98	83.746
ENSCHOG00000007137	-	100	96.429	ENSCHOG00000008316	-	91	96.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000007137	-	100	60.355	ENSG00000124789	NUP153	80	60.186	Homo_sapiens
ENSCHOG00000007137	-	59	37.812	ENSAPOG00000019495	nup153	51	37.175	Acanthochromis_polyacanthus
ENSCHOG00000007137	-	100	55.155	ENSAMEG00000000721	NUP153	80	56.962	Ailuropoda_melanoleuca
ENSCHOG00000007137	-	59	39.850	ENSAOCG00000007098	nup153	78	33.472	Amphiprion_ocellaris
ENSCHOG00000007137	-	59	39.850	ENSAPEG00000012075	nup153	78	33.704	Amphiprion_percula
ENSCHOG00000007137	-	65	45.672	ENSACAG00000004118	NUP153	84	40.898	Anolis_carolinensis
ENSCHOG00000007137	-	100	59.763	ENSANAG00000001808	NUP153	81	59.503	Aotus_nancymaae
ENSCHOG00000007137	-	54	36.336	ENSAMXG00000021025	nup153	78	33.197	Astyanax_mexicanus
ENSCHOG00000007137	-	99	57.890	ENSBTAG00000017128	NUP153	82	57.926	Bos_taurus
ENSCHOG00000007137	-	100	60.389	ENSCJAG00000006685	NUP153	80	60.051	Callithrix_jacchus
ENSCHOG00000007137	-	100	57.251	ENSCAFG00000010146	NUP153	88	58.600	Canis_familiaris
ENSCHOG00000007137	-	100	55.863	ENSCAFG00020010901	NUP153	80	58.632	Canis_lupus_dingo
ENSCHOG00000007137	-	100	58.130	ENSCHIG00000023764	NUP153	80	58.214	Capra_hircus
ENSCHOG00000007137	-	100	54.393	ENSTSYG00000001251	NUP153	80	59.122	Carlito_syrichta
ENSCHOG00000007137	-	67	61.911	ENSCPOG00000004007	NUP153	79	56.636	Cavia_porcellus
ENSCHOG00000007137	-	100	59.075	ENSCCAG00000024038	NUP153	92	58.949	Cebus_capucinus
ENSCHOG00000007137	-	100	60.186	ENSCATG00000041429	NUP153	80	60.017	Cercocebus_atys
ENSCHOG00000007137	-	99	58.312	ENSCLAG00000001915	NUP153	80	58.248	Chinchilla_lanigera
ENSCHOG00000007137	-	100	59.814	ENSCSAG00000007624	NUP153	80	59.645	Chlorocebus_sabaeus
ENSCHOG00000007137	-	100	44.761	ENSCPBG00000008333	NUP153	80	46.180	Chrysemys_picta_bellii
ENSCHOG00000007137	-	100	60.355	ENSCANG00000033390	NUP153	83	59.846	Colobus_angolensis_palliatus
ENSCHOG00000007137	-	67	62.097	ENSCGRG00001021016	Nup153	80	56.007	Cricetulus_griseus_chok1gshd
ENSCHOG00000007137	-	67	62.097	ENSCGRG00000009244	Nup153	82	56.007	Cricetulus_griseus_crigri
ENSCHOG00000007137	-	60	38.793	ENSCSEG00000017912	nup153	78	33.167	Cynoglossus_semilaevis
ENSCHOG00000007137	-	58	38.304	ENSCVAG00000020646	nup153	51	38.481	Cyprinodon_variegatus
ENSCHOG00000007137	-	100	61.571	ENSDNOG00000001153	NUP153	80	61.486	Dasypus_novemcinctus
ENSCHOG00000007137	-	67	65.416	ENSDORG00000001736	Nup153	80	58.888	Dipodomys_ordii
ENSCHOG00000007137	-	83	48.037	ENSETEG00000010324	-	63	48.411	Echinops_telfairi
ENSCHOG00000007137	-	100	59.544	ENSEASG00005009945	NUP153	82	57.167	Equus_asinus_asinus
ENSCHOG00000007137	-	100	59.375	ENSECAG00000016010	NUP153	81	56.999	Equus_caballus
ENSCHOG00000007137	-	84	62.085	ENSEEUG00000010183	NUP153	66	62.085	Erinaceus_europaeus
ENSCHOG00000007137	-	100	55.175	ENSFCAG00000011583	NUP153	80	57.143	Felis_catus
ENSCHOG00000007137	-	99	40.894	ENSFALG00000013388	NUP153	84	41.632	Ficedula_albicollis
ENSCHOG00000007137	-	59	37.911	ENSGMOG00000010422	nup153	52	36.863	Gadus_morhua
ENSCHOG00000007137	-	99	45.025	ENSGALG00000012720	NUP153	80	45.447	Gallus_gallus
ENSCHOG00000007137	-	60	39.545	ENSGAFG00000010927	nup153	65	35.657	Gambusia_affinis
ENSCHOG00000007137	-	63	38.493	ENSGACG00000005389	nup153	50	38.889	Gasterosteus_aculeatus
ENSCHOG00000007137	-	98	44.770	ENSGAGG00000022386	NUP153	80	46.225	Gopherus_agassizii
ENSCHOG00000007137	-	100	60.103	ENSGGOG00000014261	NUP153	80	59.932	Gorilla_gorilla
ENSCHOG00000007137	-	100	55.146	ENSHGLG00000007924	NUP153	80	55.146	Heterocephalus_glaber_female
ENSCHOG00000007137	-	100	55.146	ENSHGLG00100001529	NUP153	80	55.146	Heterocephalus_glaber_male
ENSCHOG00000007137	-	60	38.192	ENSHCOG00000019361	nup153	51	35.868	Hippocampus_comes
ENSCHOG00000007137	-	99	59.326	ENSSTOG00000005807	NUP153	81	59.534	Ictidomys_tridecemlineatus
ENSCHOG00000007137	-	99	53.356	ENSJJAG00000016760	Nup153	80	54.792	Jaculus_jaculus
ENSCHOG00000007137	-	59	38.881	ENSKMAG00000006344	nup153	50	38.747	Kryptolebias_marmoratus
ENSCHOG00000007137	-	53	40.772	ENSLACG00000006480	NUP153	81	33.967	Latimeria_chalumnae
ENSCHOG00000007137	-	63	40.957	ENSLOCG00000008267	nup153	79	37.221	Lepisosteus_oculatus
ENSCHOG00000007137	-	99	53.962	ENSLAFG00000015905	NUP153	80	55.897	Loxodonta_africana
ENSCHOG00000007137	-	100	60.101	ENSMFAG00000045732	NUP153	80	60.220	Macaca_fascicularis
ENSCHOG00000007137	-	100	60.186	ENSMMUG00000001993	NUP153	80	60.017	Macaca_mulatta
ENSCHOG00000007137	-	100	60.270	ENSMNEG00000038011	NUP153	80	60.101	Macaca_nemestrina
ENSCHOG00000007137	-	100	60.186	ENSMLEG00000030776	NUP153	82	59.564	Mandrillus_leucophaeus
ENSCHOG00000007137	-	59	39.430	ENSMZEG00005004371	nup153	79	33.251	Maylandia_zebra
ENSCHOG00000007137	-	99	43.814	ENSMGAG00000003139	NUP153	81	43.379	Meleagris_gallopavo
ENSCHOG00000007137	-	92	54.212	ENSMAUG00000007737	Nup153	77	54.478	Mesocricetus_auratus
ENSCHOG00000007137	-	100	60.203	ENSMICG00000006089	NUP153	80	58.235	Microcebus_murinus
ENSCHOG00000007137	-	100	55.386	ENSMOCG00000007623	Nup153	79	53.463	Microtus_ochrogaster
ENSCHOG00000007137	-	66	55.764	ENSMODG00000010951	NUP153	82	49.916	Monodelphis_domestica
ENSCHOG00000007137	-	59	38.179	ENSMALG00000013995	nup153	78	33.390	Monopterus_albus
ENSCHOG00000007137	-	99	55.574	MGP_CAROLIEiJ_G0018483	Nup153	79	55.915	Mus_caroli
ENSCHOG00000007137	-	99	56.388	ENSMUSG00000021374	Nup153	87	65.500	Mus_musculus
ENSCHOG00000007137	-	99	56.037	MGP_PahariEiJ_G0019551	Nup153	79	56.378	Mus_pahari
ENSCHOG00000007137	-	99	56.255	MGP_SPRETEiJ_G0019363	Nup153	79	56.426	Mus_spretus
ENSCHOG00000007137	-	100	56.020	ENSMLUG00000004775	NUP153	80	52.965	Myotis_lucifugus
ENSCHOG00000007137	-	100	56.986	ENSNGAG00000013817	Nup153	80	56.986	Nannospalax_galili
ENSCHOG00000007137	-	59	38.822	ENSNBRG00000012456	nup153	78	32.814	Neolamprologus_brichardi
ENSCHOG00000007137	-	100	60.557	ENSNLEG00000001141	NUP153	80	60.389	Nomascus_leucogenys
ENSCHOG00000007137	-	85	56.995	ENSMEUG00000012874	NUP153	65	56.995	Notamacropus_eugenii
ENSCHOG00000007137	-	83	58.776	ENSOPRG00000006221	NUP153	64	59.219	Ochotona_princeps
ENSCHOG00000007137	-	94	53.155	ENSODEG00000005620	NUP153	79	55.090	Octodon_degus
ENSCHOG00000007137	-	99	43.860	ENSOANG00000011858	NUP153	82	45.597	Ornithorhynchus_anatinus
ENSCHOG00000007137	-	100	56.176	ENSOCUG00000003064	NUP153	80	53.104	Oryctolagus_cuniculus
ENSCHOG00000007137	-	60	38.787	ENSORLG00000012674	nup153	51	39.271	Oryzias_latipes
ENSCHOG00000007137	-	60	38.873	ENSORLG00020006026	nup153	52	37.713	Oryzias_latipes_hni
ENSCHOG00000007137	-	60	39.155	ENSORLG00015013823	nup153	78	33.868	Oryzias_latipes_hsok
ENSCHOG00000007137	-	59	39.429	ENSOMEG00000012062	nup153	51	38.734	Oryzias_melastigma
ENSCHOG00000007137	-	100	57.202	ENSOGAG00000014899	NUP153	80	54.620	Otolemur_garnettii
ENSCHOG00000007137	-	100	57.741	ENSOARG00000011514	NUP153	81	57.609	Ovis_aries
ENSCHOG00000007137	-	100	60.270	ENSPPAG00000029729	NUP153	80	60.101	Pan_paniscus
ENSCHOG00000007137	-	100	55.175	ENSPPRG00000006160	NUP153	80	57.143	Panthera_pardus
ENSCHOG00000007137	-	100	55.008	ENSPTIG00000017212	NUP153	80	56.975	Panthera_tigris_altaica
ENSCHOG00000007137	-	100	60.355	ENSPTRG00000017752	NUP153	80	60.186	Pan_troglodytes
ENSCHOG00000007137	-	100	60.017	ENSPANG00000015139	NUP153	80	59.848	Papio_anubis
ENSCHOG00000007137	-	100	45.738	ENSPSIG00000017226	NUP153	82	45.050	Pelodiscus_sinensis
ENSCHOG00000007137	-	59	37.758	ENSPMGG00000001716	nup153	52	38.138	Periophthalmus_magnuspinnatus
ENSCHOG00000007137	-	100	56.478	ENSPEMG00000020772	Nup153	80	56.091	Peromyscus_maniculatus_bairdii
ENSCHOG00000007137	-	59	30.737	ENSPMAG00000002487	-	77	31.020	Petromyzon_marinus
ENSCHOG00000007137	-	100	45.380	ENSPCIG00000029680	NUP153	80	50.208	Phascolarctos_cinereus
ENSCHOG00000007137	-	60	41.252	ENSPFOG00000013146	nup153	79	35.270	Poecilia_formosa
ENSCHOG00000007137	-	64	38.220	ENSPMEG00000021677	nup153	78	33.711	Poecilia_mexicana
ENSCHOG00000007137	-	64	38.624	ENSPREG00000007463	nup153	79	33.929	Poecilia_reticulata
ENSCHOG00000007137	-	100	58.037	ENSPPYG00000016259	NUP153	79	57.868	Pongo_abelii
ENSCHOG00000007137	-	75	73.611	ENSPCAG00000010444	NUP153	59	73.611	Procavia_capensis
ENSCHOG00000007137	-	100	57.663	ENSPCOG00000014488	NUP153	79	55.294	Propithecus_coquereli
ENSCHOG00000007137	-	100	56.974	ENSPVAG00000012632	NUP153	85	54.149	Pteropus_vampyrus
ENSCHOG00000007137	-	99	55.047	ENSRNOG00000001456	Nup153	79	55.348	Rattus_norvegicus
ENSCHOG00000007137	-	100	59.256	ENSRBIG00000041878	NUP153	80	58.918	Rhinopithecus_bieti
ENSCHOG00000007137	-	100	60.237	ENSRROG00000029849	NUP153	82	59.446	Rhinopithecus_roxellana
ENSCHOG00000007137	-	100	60.017	ENSSBOG00000024532	NUP153	80	60.355	Saimiri_boliviensis_boliviensis
ENSCHOG00000007137	-	77	47.261	ENSSHAG00000016087	-	98	47.154	Sarcophilus_harrisii
ENSCHOG00000007137	-	59	39.559	ENSSDUG00000010779	nup153	50	39.221	Seriola_dumerili
ENSCHOG00000007137	-	59	39.035	ENSSLDG00000012692	nup153	63	35.051	Seriola_lalandi_dorsalis
ENSCHOG00000007137	-	100	50.595	ENSSARG00000013269	NUP153	82	50.680	Sorex_araneus
ENSCHOG00000007137	-	100	45.348	ENSSPUG00000016687	NUP153	79	45.844	Sphenodon_punctatus
ENSCHOG00000007137	-	100	56.854	ENSSSCG00000026034	NUP153	81	58.833	Sus_scrofa
ENSCHOG00000007137	-	99	40.694	ENSTGUG00000005917	NUP153	82	41.251	Taeniopygia_guttata
ENSCHOG00000007137	-	80	59.701	ENSTBEG00000004161	NUP153	60	60.150	Tupaia_belangeri
ENSCHOG00000007137	-	94	55.446	ENSTTRG00000007060	NUP153	69	55.446	Tursiops_truncatus
ENSCHOG00000007137	-	69	51.625	ENSUAMG00000015215	NUP153	89	54.126	Ursus_americanus
ENSCHOG00000007137	-	100	56.408	ENSUMAG00000017135	NUP153	83	56.492	Ursus_maritimus
ENSCHOG00000007137	-	100	60.186	ENSVPAG00000002072	NUP153	80	60.186	Vicugna_pacos
ENSCHOG00000007137	-	100	55.695	ENSVVUG00000003265	NUP153	88	58.516	Vulpes_vulpes
ENSCHOG00000007137	-	100	35.249	ENSXETG00000014197	nup153	79	34.602	Xenopus_tropicalis
ENSCHOG00000007137	-	62	38.194	ENSXCOG00000020098	nup153	64	35.174	Xiphophorus_couchianus
ENSCHOG00000007137	-	83	34.669	ENSXMAG00000003437	nup153	64	35.551	Xiphophorus_maculatus