EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000007187 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 51551 bases
Position: chrGeneScaffold_857:3760-55310
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006394	Rif1_N	PF12231.8	6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000007236	RIF1-201	7383	-	ENSCHOP00000006394	2460 (aa)	-	UPI0001F9F751

Gene Model

Click here to download ENSCHOG00000007187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000007187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000007187	RIF1	97	77.826	ENSG00000080345	RIF1	97	77.826	Homo_sapiens
ENSCHOG00000007187	RIF1	97	74.783	ENSAMEG00000008461	RIF1	97	74.783	Ailuropoda_melanoleuca
ENSCHOG00000007187	RIF1	61	51.556	ENSACIG00000017765	rif1	67	51.556	Amphilophus_citrinellus
ENSCHOG00000007187	RIF1	66	49.771	ENSAPEG00000013228	rif1	57	49.771	Amphiprion_percula
ENSCHOG00000007187	RIF1	59	45.575	ENSATEG00000022887	rif1	61	45.575	Anabas_testudineus
ENSCHOG00000007187	RIF1	80	71.006	ENSAPLG00000007092	RIF1	87	71.006	Anas_platyrhynchos
ENSCHOG00000007187	RIF1	80	57.396	ENSACAG00000003714	RIF1	86	57.396	Anolis_carolinensis
ENSCHOG00000007187	RIF1	97	80.087	ENSANAG00000024840	RIF1	97	80.087	Aotus_nancymaae
ENSCHOG00000007187	RIF1	91	88.462	ENSBTAG00000021020	RIF1	97	88.462	Bos_taurus
ENSCHOG00000007187	RIF1	97	79.130	ENSCJAG00000003138	RIF1	97	79.130	Callithrix_jacchus
ENSCHOG00000007187	RIF1	97	73.999	ENSCAFG00000005670	RIF1	94	73.999	Canis_familiaris
ENSCHOG00000007187	RIF1	97	73.478	ENSCAFG00020016401	RIF1	97	73.478	Canis_lupus_dingo
ENSCHOG00000007187	RIF1	97	77.826	ENSCHIG00000020327	RIF1	97	77.826	Capra_hircus
ENSCHOG00000007187	RIF1	97	73.493	ENSTSYG00000008861	RIF1	97	73.401	Carlito_syrichta
ENSCHOG00000007187	RIF1	75	73.843	ENSCAPG00000008957	RIF1	90	73.843	Cavia_aperea
ENSCHOG00000007187	RIF1	96	73.077	ENSCPOG00000037898	RIF1	97	73.077	Cavia_porcellus
ENSCHOG00000007187	RIF1	97	78.788	ENSCCAG00000024760	RIF1	98	78.788	Cebus_capucinus
ENSCHOG00000007187	RIF1	97	77.826	ENSCATG00000033353	RIF1	97	77.826	Cercocebus_atys
ENSCHOG00000007187	RIF1	93	87.970	ENSCLAG00000001517	RIF1	97	87.970	Chinchilla_lanigera
ENSCHOG00000007187	RIF1	97	77.826	ENSCSAG00000016089	RIF1	97	77.826	Chlorocebus_sabaeus
ENSCHOG00000007187	RIF1	84	71.513	ENSCPBG00000025885	RIF1	91	72.700	Chrysemys_picta_bellii
ENSCHOG00000007187	RIF1	97	74.309	ENSCANG00000028962	RIF1	96	78.261	Colobus_angolensis_palliatus
ENSCHOG00000007187	RIF1	97	69.620	ENSCGRG00001024589	Rif1	97	69.620	Cricetulus_griseus_chok1gshd
ENSCHOG00000007187	RIF1	94	78.857	ENSCGRG00000010713	Rif1	96	78.857	Cricetulus_griseus_crigri
ENSCHOG00000007187	RIF1	63	56.889	ENSCSEG00000003945	rif1	68	47.807	Cynoglossus_semilaevis
ENSCHOG00000007187	RIF1	61	51.802	ENSCVAG00000022479	rif1	65	51.802	Cyprinodon_variegatus
ENSCHOG00000007187	RIF1	96	80.000	ENSDNOG00000011194	RIF1	93	80.000	Dasypus_novemcinctus
ENSCHOG00000007187	RIF1	89	87.391	ENSETEG00000012421	RIF1	89	87.391	Echinops_telfairi
ENSCHOG00000007187	RIF1	90	92.308	ENSEASG00005023434	RIF1	96	92.308	Equus_asinus_asinus
ENSCHOG00000007187	RIF1	97	79.130	ENSECAG00000012679	RIF1	97	79.130	Equus_caballus
ENSCHOG00000007187	RIF1	60	50.926	ENSELUG00000006826	rif1	53	51.327	Esox_lucius
ENSCHOG00000007187	RIF1	97	74.348	ENSFCAG00000029742	RIF1	97	74.348	Felis_catus
ENSCHOG00000007187	RIF1	73	81.481	ENSFALG00000013874	RIF1	95	81.481	Ficedula_albicollis
ENSCHOG00000007187	RIF1	97	73.478	ENSFDAG00000006538	RIF1	96	73.478	Fukomys_damarensis
ENSCHOG00000007187	RIF1	59	49.778	ENSFHEG00000013721	rif1	62	49.778	Fundulus_heteroclitus
ENSCHOG00000007187	RIF1	50	52.941	ENSGMOG00000003517	rif1	77	52.941	Gadus_morhua
ENSCHOG00000007187	RIF1	76	79.730	ENSGALG00000012484	RIF1	88	79.730	Gallus_gallus
ENSCHOG00000007187	RIF1	60	52.273	ENSGAFG00000017196	rif1	66	51.111	Gambusia_affinis
ENSCHOG00000007187	RIF1	56	54.878	ENSGACG00000008579	rif1	63	53.383	Gasterosteus_aculeatus
ENSCHOG00000007187	RIF1	84	71.988	ENSGAGG00000012595	RIF1	92	73.193	Gopherus_agassizii
ENSCHOG00000007187	RIF1	86	79.540	ENSGGOG00000040178	RIF1	93	79.540	Gorilla_gorilla
ENSCHOG00000007187	RIF1	91	75.217	ENSHGLG00100009807	RIF1	97	75.217	Heterocephalus_glaber_male
ENSCHOG00000007187	RIF1	61	50.847	ENSHCOG00000015943	rif1	59	50.847	Hippocampus_comes
ENSCHOG00000007187	RIF1	97	76.957	ENSSTOG00000020712	RIF1	97	76.957	Ictidomys_tridecemlineatus
ENSCHOG00000007187	RIF1	97	69.198	ENSJJAG00000023000	Rif1	97	69.198	Jaculus_jaculus
ENSCHOG00000007187	RIF1	65	45.532	ENSKMAG00000002852	rif1	68	45.532	Kryptolebias_marmoratus
ENSCHOG00000007187	RIF1	59	50.000	ENSLBEG00000023196	rif1	57	50.000	Labrus_bergylta
ENSCHOG00000007187	RIF1	82	62.611	ENSLACG00000005425	RIF1	86	62.611	Latimeria_chalumnae
ENSCHOG00000007187	RIF1	60	54.185	ENSLOCG00000002657	rif1	86	54.185	Lepisosteus_oculatus
ENSCHOG00000007187	RIF1	97	76.522	ENSLAFG00000009796	RIF1	97	76.522	Loxodonta_africana
ENSCHOG00000007187	RIF1	97	77.391	ENSMFAG00000032233	RIF1	97	77.391	Macaca_fascicularis
ENSCHOG00000007187	RIF1	97	76.957	ENSMMUG00000008611	RIF1	97	76.957	Macaca_mulatta
ENSCHOG00000007187	RIF1	97	77.391	ENSMNEG00000031616	RIF1	97	77.391	Macaca_nemestrina
ENSCHOG00000007187	RIF1	97	77.826	ENSMLEG00000042945	RIF1	97	77.826	Mandrillus_leucophaeus
ENSCHOG00000007187	RIF1	71	50.885	ENSMAMG00000001745	rif1	62	50.885	Mastacembelus_armatus
ENSCHOG00000007187	RIF1	68	50.667	ENSMZEG00005020920	rif1	66	50.667	Maylandia_zebra
ENSCHOG00000007187	RIF1	80	69.412	ENSMGAG00000012732	RIF1	87	69.412	Meleagris_gallopavo
ENSCHOG00000007187	RIF1	91	88.000	ENSMAUG00000013158	Rif1	95	88.000	Mesocricetus_auratus
ENSCHOG00000007187	RIF1	97	76.957	ENSMICG00000046127	RIF1	97	76.957	Microcebus_murinus
ENSCHOG00000007187	RIF1	97	72.609	ENSMOCG00000009381	Rif1	97	72.609	Microtus_ochrogaster
ENSCHOG00000007187	RIF1	59	50.226	ENSMMOG00000006519	rif1	61	50.226	Mola_mola
ENSCHOG00000007187	RIF1	97	66.234	ENSMODG00000003703	RIF1	97	66.234	Monodelphis_domestica
ENSCHOG00000007187	RIF1	55	49.558	ENSMALG00000016759	rif1	62	49.558	Monopterus_albus
ENSCHOG00000007187	RIF1	97	71.304	MGP_CAROLIEiJ_G0023555	Rif1	97	71.304	Mus_caroli
ENSCHOG00000007187	RIF1	97	69.620	ENSMUSG00000036202	Rif1	97	69.620	Mus_musculus
ENSCHOG00000007187	RIF1	95	71.739	MGP_PahariEiJ_G0025006	Rif1	97	71.739	Mus_pahari
ENSCHOG00000007187	RIF1	97	71.739	MGP_SPRETEiJ_G0024476	Rif1	97	71.739	Mus_spretus
ENSCHOG00000007187	RIF1	97	76.087	ENSMPUG00000000371	RIF1	97	76.087	Mustela_putorius_furo
ENSCHOG00000007187	RIF1	87	72.790	ENSMLUG00000003376	RIF1	97	72.790	Myotis_lucifugus
ENSCHOG00000007187	RIF1	97	73.043	ENSNGAG00000009268	Rif1	97	73.043	Nannospalax_galili
ENSCHOG00000007187	RIF1	59	50.222	ENSNBRG00000014257	rif1	65	49.778	Neolamprologus_brichardi
ENSCHOG00000007187	RIF1	97	73.054	ENSNLEG00000010955	RIF1	97	73.054	Nomascus_leucogenys
ENSCHOG00000007187	RIF1	71	75.758	ENSMEUG00000007601	-	78	75.758	Notamacropus_eugenii
ENSCHOG00000007187	RIF1	97	73.504	ENSODEG00000003950	RIF1	97	73.504	Octodon_degus
ENSCHOG00000007187	RIF1	59	50.667	ENSONIG00000013657	rif1	56	50.667	Oreochromis_niloticus
ENSCHOG00000007187	RIF1	71	74.706	ENSOANG00000006078	-	73	74.706	Ornithorhynchus_anatinus
ENSCHOG00000007187	RIF1	97	76.957	ENSOCUG00000017435	RIF1	97	76.957	Oryctolagus_cuniculus
ENSCHOG00000007187	RIF1	59	45.249	ENSORLG00020001302	rif1	64	45.249	Oryzias_latipes_hni
ENSCHOG00000007187	RIF1	58	45.249	ENSORLG00015000009	rif1	63	45.249	Oryzias_latipes_hsok
ENSCHOG00000007187	RIF1	60	45.957	ENSOMEG00000021513	rif1	65	45.957	Oryzias_melastigma
ENSCHOG00000007187	RIF1	97	76.522	ENSOGAG00000006141	RIF1	97	76.522	Otolemur_garnettii
ENSCHOG00000007187	RIF1	97	77.826	ENSOARG00000008930	RIF1	97	77.826	Ovis_aries
ENSCHOG00000007187	RIF1	97	77.391	ENSPPAG00000023754	RIF1	97	77.391	Pan_paniscus
ENSCHOG00000007187	RIF1	97	74.348	ENSPPRG00000003618	RIF1	97	74.348	Panthera_pardus
ENSCHOG00000007187	RIF1	97	74.348	ENSPTIG00000020652	RIF1	97	74.348	Panthera_tigris_altaica
ENSCHOG00000007187	RIF1	97	77.391	ENSPTRG00000012534	RIF1	97	77.391	Pan_troglodytes
ENSCHOG00000007187	RIF1	97	77.826	ENSPANG00000008525	RIF1	97	77.826	Papio_anubis
ENSCHOG00000007187	RIF1	59	53.953	ENSPKIG00000004267	rif1	64	54.867	Paramormyrops_kingsleyae
ENSCHOG00000007187	RIF1	62	50.661	ENSPMGG00000016141	rif1	74	50.220	Periophthalmus_magnuspinnatus
ENSCHOG00000007187	RIF1	94	82.738	ENSPEMG00000000446	Rif1	95	82.738	Peromyscus_maniculatus_bairdii
ENSCHOG00000007187	RIF1	97	67.532	ENSPCIG00000009185	RIF1	97	67.532	Phascolarctos_cinereus
ENSCHOG00000007187	RIF1	60	50.667	ENSPFOG00000017804	rif1	63	50.667	Poecilia_formosa
ENSCHOG00000007187	RIF1	52	66.667	ENSPFOG00000000554	-	60	66.667	Poecilia_formosa
ENSCHOG00000007187	RIF1	60	50.228	ENSPLAG00000017945	rif1	66	48.889	Poecilia_latipinna
ENSCHOG00000007187	RIF1	61	50.649	ENSPREG00000018052	rif1	69	49.333	Poecilia_reticulata
ENSCHOG00000007187	RIF1	97	77.826	ENSPPYG00000012846	RIF1	97	77.826	Pongo_abelii
ENSCHOG00000007187	RIF1	78	73.043	ENSPCAG00000009032	RIF1	78	73.043	Procavia_capensis
ENSCHOG00000007187	RIF1	97	76.522	ENSPCOG00000027888	RIF1	97	76.522	Propithecus_coquereli
ENSCHOG00000007187	RIF1	89	84.783	ENSPVAG00000014276	RIF1	92	84.783	Pteropus_vampyrus
ENSCHOG00000007187	RIF1	72	50.667	ENSPNYG00000012940	rif1	65	49.778	Pundamilia_nyererei
ENSCHOG00000007187	RIF1	97	69.198	ENSRNOG00000054901	Rif1	97	69.198	Rattus_norvegicus
ENSCHOG00000007187	RIF1	97	78.261	ENSRBIG00000003704	RIF1	97	78.261	Rhinopithecus_bieti
ENSCHOG00000007187	RIF1	97	78.261	ENSRROG00000028206	RIF1	97	78.261	Rhinopithecus_roxellana
ENSCHOG00000007187	RIF1	94	89.231	ENSSBOG00000029530	RIF1	97	89.231	Saimiri_boliviensis_boliviensis
ENSCHOG00000007187	RIF1	59	53.540	ENSSFOG00015021539	rif1	69	53.097	Scleropages_formosus
ENSCHOG00000007187	RIF1	59	50.000	ENSSDUG00000015632	rif1	68	50.000	Seriola_dumerili
ENSCHOG00000007187	RIF1	57	84.524	ENSSARG00000007161	-	57	84.524	Sorex_araneus
ENSCHOG00000007187	RIF1	89	72.189	ENSSPUG00000003062	RIF1	96	72.189	Sphenodon_punctatus
ENSCHOG00000007187	RIF1	97	75.217	ENSSSCG00000016395	RIF1	97	75.217	Sus_scrofa
ENSCHOG00000007187	RIF1	62	47.807	ENSTRUG00000015808	rif1	68	47.807	Takifugu_rubripes
ENSCHOG00000007187	RIF1	60	49.560	ENSTNIG00000011538	rif1	64	49.560	Tetraodon_nigroviridis
ENSCHOG00000007187	RIF1	75	87.261	ENSTBEG00000016082	RIF1	75	87.261	Tupaia_belangeri
ENSCHOG00000007187	RIF1	97	76.957	ENSTTRG00000011190	RIF1	97	76.957	Tursiops_truncatus
ENSCHOG00000007187	RIF1	87	74.977	ENSUAMG00000026385	RIF1	96	74.977	Ursus_americanus
ENSCHOG00000007187	RIF1	97	74.931	ENSUMAG00000000337	RIF1	97	74.931	Ursus_maritimus
ENSCHOG00000007187	RIF1	97	76.087	ENSVPAG00000002162	RIF1	97	76.087	Vicugna_pacos
ENSCHOG00000007187	RIF1	97	73.376	ENSVVUG00000011293	RIF1	97	73.226	Vulpes_vulpes
ENSCHOG00000007187	RIF1	81	61.818	ENSXETG00000004530	rif1	67	42.731	Xenopus_tropicalis
ENSCHOG00000007187	RIF1	60	51.111	ENSXMAG00000000506	rif1	63	51.111	Xiphophorus_maculatus