EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000007216 (Gene tree)
Gene ID: -
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 36031 bases
Position: chrGeneScaffold_2624:1105-37135
Accession: 17687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006390	RTC	PF01137.21	2.8e-29	1	1
ENSCHOP00000006390	RTC_insert	PF05189.13	4.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000007232	RCL1-201	963	-	ENSCHOP00000006390	321 (aa)	-	UPI0001F9F7A7

Gene Model

Click here to download ENSCHOG00000007216's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000007216's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000007216	RCL1	100	82.043	ENSG00000120158	RCL1	96	95.420	Homo_sapiens
ENSCHOG00000007216	RCL1	100	70.279	ENSAPOG00000015666	rcl1	86	70.279	Acanthochromis_polyacanthus
ENSCHOG00000007216	RCL1	51	31.765	ENSAMEG00000008855	RTCA	58	31.098	Ailuropoda_melanoleuca
ENSCHOG00000007216	RCL1	100	81.734	ENSAMEG00000002631	RCL1	87	81.734	Ailuropoda_melanoleuca
ENSCHOG00000007216	RCL1	99	69.906	ENSACIG00000021195	rcl1	86	69.906	Amphilophus_citrinellus
ENSCHOG00000007216	RCL1	100	69.659	ENSAOCG00000002223	rcl1	86	69.659	Amphiprion_ocellaris
ENSCHOG00000007216	RCL1	100	69.659	ENSAPEG00000006905	rcl1	86	69.659	Amphiprion_percula
ENSCHOG00000007216	RCL1	99	67.085	ENSATEG00000020026	rcl1	86	67.085	Anabas_testudineus
ENSCHOG00000007216	RCL1	86	80.435	ENSAPLG00000006031	RCL1	85	80.435	Anas_platyrhynchos
ENSCHOG00000007216	RCL1	100	72.446	ENSACAG00000003640	RCL1	87	72.446	Anolis_carolinensis
ENSCHOG00000007216	RCL1	100	81.734	ENSANAG00000037372	RCL1	87	81.734	Aotus_nancymaae
ENSCHOG00000007216	RCL1	99	69.279	ENSACLG00000021724	rcl1	86	69.279	Astatotilapia_calliptera
ENSCHOG00000007216	RCL1	98	69.401	ENSAMXG00000033394	rcl1	86	69.401	Astyanax_mexicanus
ENSCHOG00000007216	RCL1	99	39.062	WBGene00022852	ZK1127.5	84	39.062	Caenorhabditis_elegans
ENSCHOG00000007216	RCL1	100	82.043	ENSCJAG00000011202	RCL1	93	82.043	Callithrix_jacchus
ENSCHOG00000007216	RCL1	100	81.424	ENSCAFG00000002091	RCL1	87	81.424	Canis_familiaris
ENSCHOG00000007216	RCL1	100	81.734	ENSCAFG00020000638	RCL1	68	81.734	Canis_lupus_dingo
ENSCHOG00000007216	RCL1	100	80.495	ENSCHIG00000012407	RCL1	87	80.495	Capra_hircus
ENSCHOG00000007216	RCL1	86	88.406	ENSTSYG00000009592	RCL1	70	96.183	Carlito_syrichta
ENSCHOG00000007216	RCL1	53	69.767	ENSCAPG00000013575	RCL1	73	69.767	Cavia_aperea
ENSCHOG00000007216	RCL1	100	81.115	ENSCPOG00000015354	RCL1	87	81.115	Cavia_porcellus
ENSCHOG00000007216	RCL1	100	81.734	ENSCCAG00000033505	RCL1	87	81.734	Cebus_capucinus
ENSCHOG00000007216	RCL1	100	81.424	ENSCATG00000034721	RCL1	87	81.424	Cercocebus_atys
ENSCHOG00000007216	RCL1	100	81.115	ENSCLAG00000007445	RCL1	87	81.115	Chinchilla_lanigera
ENSCHOG00000007216	RCL1	100	81.734	ENSCSAG00000008811	RCL1	87	81.734	Chlorocebus_sabaeus
ENSCHOG00000007216	RCL1	100	75.542	ENSCPBG00000025481	RCL1	79	81.522	Chrysemys_picta_bellii
ENSCHOG00000007216	RCL1	98	49.051	ENSCING00000019565	-	84	49.051	Ciona_intestinalis
ENSCHOG00000007216	RCL1	100	81.734	ENSCANG00000027099	RCL1	87	81.734	Colobus_angolensis_palliatus
ENSCHOG00000007216	RCL1	100	80.495	ENSCGRG00001013748	Rcl1	87	80.495	Cricetulus_griseus_chok1gshd
ENSCHOG00000007216	RCL1	86	86.232	ENSCGRG00000005843	Rcl1	84	86.232	Cricetulus_griseus_crigri
ENSCHOG00000007216	RCL1	99	68.025	ENSCSEG00000000712	rcl1	84	68.025	Cynoglossus_semilaevis
ENSCHOG00000007216	RCL1	99	69.906	ENSCVAG00000011536	rcl1	86	69.906	Cyprinodon_variegatus
ENSCHOG00000007216	RCL1	98	68.038	ENSDARG00000038312	rcl1	86	68.038	Danio_rerio
ENSCHOG00000007216	RCL1	67	86.047	ENSDNOG00000019911	RCL1	77	96.970	Dasypus_novemcinctus
ENSCHOG00000007216	RCL1	100	80.805	ENSDORG00000015645	Rcl1	87	80.805	Dipodomys_ordii
ENSCHOG00000007216	RCL1	100	46.626	FBgn0020909	Rtc1	85	46.626	Drosophila_melanogaster
ENSCHOG00000007216	RCL1	100	49.226	ENSEBUG00000016621	-	86	49.226	Eptatretus_burgeri
ENSCHOG00000007216	RCL1	100	82.043	ENSEASG00005010653	RCL1	87	82.043	Equus_asinus_asinus
ENSCHOG00000007216	RCL1	100	82.043	ENSECAG00000015973	RCL1	91	82.043	Equus_caballus
ENSCHOG00000007216	RCL1	100	75.232	ENSEEUG00000009801	RCL1	94	75.232	Erinaceus_europaeus
ENSCHOG00000007216	RCL1	100	67.183	ENSELUG00000007353	rcl1	92	67.183	Esox_lucius
ENSCHOG00000007216	RCL1	100	80.495	ENSFCAG00000014557	RCL1	87	80.495	Felis_catus
ENSCHOG00000007216	RCL1	86	79.710	ENSFALG00000010553	RCL1	73	79.710	Ficedula_albicollis
ENSCHOG00000007216	RCL1	86	85.507	ENSFDAG00000004209	RCL1	84	85.507	Fukomys_damarensis
ENSCHOG00000007216	RCL1	99	69.592	ENSFHEG00000011228	rcl1	86	69.592	Fundulus_heteroclitus
ENSCHOG00000007216	RCL1	99	67.712	ENSGMOG00000004677	rcl1	86	67.712	Gadus_morhua
ENSCHOG00000007216	RCL1	99	73.041	ENSGALG00000015024	RCL1	85	73.041	Gallus_gallus
ENSCHOG00000007216	RCL1	99	68.966	ENSGAFG00000007257	rcl1	86	68.966	Gambusia_affinis
ENSCHOG00000007216	RCL1	100	69.350	ENSGACG00000017474	rcl1	86	69.350	Gasterosteus_aculeatus
ENSCHOG00000007216	RCL1	100	75.232	ENSGAGG00000003689	RCL1	87	75.232	Gopherus_agassizii
ENSCHOG00000007216	RCL1	100	81.424	ENSGGOG00000015041	RCL1	87	81.424	Gorilla_gorilla
ENSCHOG00000007216	RCL1	99	69.592	ENSHBUG00000001393	rcl1	86	69.592	Haplochromis_burtoni
ENSCHOG00000007216	RCL1	100	67.183	ENSHGLG00000005368	-	86	66.254	Heterocephalus_glaber_female
ENSCHOG00000007216	RCL1	100	81.424	ENSHGLG00000016452	RCL1	87	81.424	Heterocephalus_glaber_female
ENSCHOG00000007216	RCL1	100	68.111	ENSHGLG00100018010	-	86	67.183	Heterocephalus_glaber_male
ENSCHOG00000007216	RCL1	100	80.997	ENSHGLG00100008718	-	86	80.997	Heterocephalus_glaber_male
ENSCHOG00000007216	RCL1	99	67.712	ENSHCOG00000020170	rcl1	86	67.712	Hippocampus_comes
ENSCHOG00000007216	RCL1	98	70.032	ENSIPUG00000018054	RCL1	86	70.032	Ictalurus_punctatus
ENSCHOG00000007216	RCL1	100	80.805	ENSSTOG00000000023	RCL1	87	80.805	Ictidomys_tridecemlineatus
ENSCHOG00000007216	RCL1	100	80.495	ENSJJAG00000022803	-	87	80.495	Jaculus_jaculus
ENSCHOG00000007216	RCL1	51	68.485	ENSJJAG00000000764	-	75	68.354	Jaculus_jaculus
ENSCHOG00000007216	RCL1	100	70.405	ENSJJAG00000015632	-	86	70.405	Jaculus_jaculus
ENSCHOG00000007216	RCL1	98	69.304	ENSKMAG00000011946	rcl1	85	69.304	Kryptolebias_marmoratus
ENSCHOG00000007216	RCL1	99	70.032	ENSLBEG00000003957	rcl1	85	70.032	Labrus_bergylta
ENSCHOG00000007216	RCL1	98	71.203	ENSLACG00000004594	RCL1	98	71.203	Latimeria_chalumnae
ENSCHOG00000007216	RCL1	100	70.898	ENSLOCG00000010148	rcl1	85	70.898	Lepisosteus_oculatus
ENSCHOG00000007216	RCL1	100	78.328	ENSLAFG00000017495	RCL1	87	78.328	Loxodonta_africana
ENSCHOG00000007216	RCL1	100	81.734	ENSMFAG00000037906	RCL1	87	81.734	Macaca_fascicularis
ENSCHOG00000007216	RCL1	100	81.734	ENSMNEG00000012288	RCL1	95	81.734	Macaca_nemestrina
ENSCHOG00000007216	RCL1	100	81.734	ENSMLEG00000043088	RCL1	87	81.734	Mandrillus_leucophaeus
ENSCHOG00000007216	RCL1	99	69.279	ENSMAMG00000008311	rcl1	86	69.279	Mastacembelus_armatus
ENSCHOG00000007216	RCL1	99	69.279	ENSMZEG00005017292	rcl1	86	69.279	Maylandia_zebra
ENSCHOG00000007216	RCL1	51	83.432	ENSMGAG00000002245	RCL1	74	83.333	Meleagris_gallopavo
ENSCHOG00000007216	RCL1	51	95.152	ENSMAUG00000008922	Rcl1	73	94.937	Mesocricetus_auratus
ENSCHOG00000007216	RCL1	100	81.115	ENSMICG00000015562	RCL1	87	81.115	Microcebus_murinus
ENSCHOG00000007216	RCL1	100	80.805	ENSMOCG00000012145	Rcl1	87	80.805	Microtus_ochrogaster
ENSCHOG00000007216	RCL1	99	66.875	ENSMMOG00000021264	rcl1	86	66.875	Mola_mola
ENSCHOG00000007216	RCL1	100	78.638	ENSMODG00000015377	RCL1	86	78.638	Monodelphis_domestica
ENSCHOG00000007216	RCL1	99	67.712	ENSMALG00000018618	rcl1	86	67.712	Monopterus_albus
ENSCHOG00000007216	RCL1	100	81.424	MGP_CAROLIEiJ_G0022853	Rcl1	87	81.424	Mus_caroli
ENSCHOG00000007216	RCL1	100	80.805	ENSMUSG00000024785	Rcl1	87	80.805	Mus_musculus
ENSCHOG00000007216	RCL1	100	80.495	MGP_PahariEiJ_G0014346	Rcl1	87	80.495	Mus_pahari
ENSCHOG00000007216	RCL1	100	80.495	MGP_SPRETEiJ_G0023771	Rcl1	87	80.495	Mus_spretus
ENSCHOG00000007216	RCL1	100	80.495	ENSMPUG00000004998	RCL1	87	80.495	Mustela_putorius_furo
ENSCHOG00000007216	RCL1	100	80.495	ENSMLUG00000009654	RCL1	87	80.495	Myotis_lucifugus
ENSCHOG00000007216	RCL1	100	80.805	ENSNGAG00000015327	Rcl1	87	80.805	Nannospalax_galili
ENSCHOG00000007216	RCL1	86	73.913	ENSNBRG00000019854	rcl1	75	73.913	Neolamprologus_brichardi
ENSCHOG00000007216	RCL1	100	81.734	ENSNLEG00000008891	RCL1	88	81.734	Nomascus_leucogenys
ENSCHOG00000007216	RCL1	100	72.446	ENSMEUG00000007653	RCL1	87	72.446	Notamacropus_eugenii
ENSCHOG00000007216	RCL1	100	79.876	ENSOPRG00000010965	RCL1	87	79.876	Ochotona_princeps
ENSCHOG00000007216	RCL1	86	74.643	ENSODEG00000004151	RCL1	79	74.275	Octodon_degus
ENSCHOG00000007216	RCL1	99	68.966	ENSONIG00000003871	rcl1	86	68.966	Oreochromis_niloticus
ENSCHOG00000007216	RCL1	100	81.115	ENSOCUG00000008161	RCL1	87	81.115	Oryctolagus_cuniculus
ENSCHOG00000007216	RCL1	100	68.421	ENSORLG00000010443	rcl1	86	68.421	Oryzias_latipes
ENSCHOG00000007216	RCL1	100	68.421	ENSORLG00020012211	rcl1	86	68.421	Oryzias_latipes_hni
ENSCHOG00000007216	RCL1	100	67.802	ENSORLG00015001122	rcl1	86	67.802	Oryzias_latipes_hsok
ENSCHOG00000007216	RCL1	100	69.350	ENSOMEG00000022976	rcl1	76	69.350	Oryzias_melastigma
ENSCHOG00000007216	RCL1	100	79.567	ENSOGAG00000007480	RCL1	87	79.567	Otolemur_garnettii
ENSCHOG00000007216	RCL1	100	80.495	ENSOARG00000013463	RCL1	87	80.495	Ovis_aries
ENSCHOG00000007216	RCL1	100	82.043	ENSPPAG00000037958	RCL1	87	82.043	Pan_paniscus
ENSCHOG00000007216	RCL1	100	80.685	ENSPPRG00000022645	RCL1	87	80.685	Panthera_pardus
ENSCHOG00000007216	RCL1	86	86.594	ENSPTIG00000019031	RCL1	73	93.038	Panthera_tigris_altaica
ENSCHOG00000007216	RCL1	100	81.734	ENSPTRG00000020743	RCL1	87	81.734	Pan_troglodytes
ENSCHOG00000007216	RCL1	100	81.734	ENSPANG00000025151	RCL1	87	81.734	Papio_anubis
ENSCHOG00000007216	RCL1	100	69.350	ENSPKIG00000021022	rcl1	86	69.350	Paramormyrops_kingsleyae
ENSCHOG00000007216	RCL1	86	81.522	ENSPSIG00000012302	RCL1	84	81.522	Pelodiscus_sinensis
ENSCHOG00000007216	RCL1	100	66.563	ENSPMGG00000024007	rcl1	86	66.563	Periophthalmus_magnuspinnatus
ENSCHOG00000007216	RCL1	100	81.424	ENSPEMG00000023275	Rcl1	87	81.424	Peromyscus_maniculatus_bairdii
ENSCHOG00000007216	RCL1	75	31.429	ENSPMAG00000009110	rtca	64	31.429	Petromyzon_marinus
ENSCHOG00000007216	RCL1	100	79.257	ENSPCIG00000000188	RCL1	87	79.257	Phascolarctos_cinereus
ENSCHOG00000007216	RCL1	99	69.279	ENSPFOG00000019682	rcl1	85	69.279	Poecilia_formosa
ENSCHOG00000007216	RCL1	99	69.279	ENSPLAG00000022354	rcl1	86	69.279	Poecilia_latipinna
ENSCHOG00000007216	RCL1	99	69.279	ENSPMEG00000008131	rcl1	86	69.279	Poecilia_mexicana
ENSCHOG00000007216	RCL1	99	69.279	ENSPREG00000008032	rcl1	86	69.279	Poecilia_reticulata
ENSCHOG00000007216	RCL1	100	81.734	ENSPPYG00000019244	RCL1	87	81.734	Pongo_abelii
ENSCHOG00000007216	RCL1	94	74.587	ENSPCAG00000001440	RCL1	82	74.587	Procavia_capensis
ENSCHOG00000007216	RCL1	100	81.734	ENSPCOG00000009611	RCL1	87	81.734	Propithecus_coquereli
ENSCHOG00000007216	RCL1	100	81.734	ENSPVAG00000015752	RCL1	87	81.734	Pteropus_vampyrus
ENSCHOG00000007216	RCL1	99	69.279	ENSPNYG00000012910	rcl1	86	69.279	Pundamilia_nyererei
ENSCHOG00000007216	RCL1	98	70.347	ENSPNAG00000028307	rcl1	78	70.347	Pygocentrus_nattereri
ENSCHOG00000007216	RCL1	100	80.495	ENSRNOG00000015491	Rcl1	87	80.495	Rattus_norvegicus
ENSCHOG00000007216	RCL1	100	81.734	ENSRBIG00000035818	RCL1	87	81.734	Rhinopithecus_bieti
ENSCHOG00000007216	RCL1	100	81.734	ENSRROG00000029781	RCL1	87	81.734	Rhinopithecus_roxellana
ENSCHOG00000007216	RCL1	83	34.191	YOL010W	-	72	31.111	Saccharomyces_cerevisiae
ENSCHOG00000007216	RCL1	100	82.043	ENSSBOG00000026369	RCL1	87	82.043	Saimiri_boliviensis_boliviensis
ENSCHOG00000007216	RCL1	86	84.058	ENSSHAG00000014086	RCL1	84	84.058	Sarcophilus_harrisii
ENSCHOG00000007216	RCL1	100	69.659	ENSSFOG00015023020	rcl1	86	69.659	Scleropages_formosus
ENSCHOG00000007216	RCL1	99	68.025	ENSSMAG00000019751	rcl1	74	68.025	Scophthalmus_maximus
ENSCHOG00000007216	RCL1	100	68.421	ENSSDUG00000006349	rcl1	86	68.421	Seriola_dumerili
ENSCHOG00000007216	RCL1	100	68.731	ENSSLDG00000022076	rcl1	86	68.731	Seriola_lalandi_dorsalis
ENSCHOG00000007216	RCL1	100	82.243	ENSSARG00000009260	RCL1	87	82.243	Sorex_araneus
ENSCHOG00000007216	RCL1	100	75.542	ENSSPUG00000016330	RCL1	87	75.542	Sphenodon_punctatus
ENSCHOG00000007216	RCL1	100	70.279	ENSSPAG00000018038	rcl1	86	70.279	Stegastes_partitus
ENSCHOG00000007216	RCL1	100	81.734	ENSSSCG00000005217	RCL1	72	81.734	Sus_scrofa
ENSCHOG00000007216	RCL1	100	71.692	ENSTGUG00000005138	RCL1	87	71.692	Taeniopygia_guttata
ENSCHOG00000007216	RCL1	99	70.219	ENSTRUG00000010493	rcl1	86	70.219	Takifugu_rubripes
ENSCHOG00000007216	RCL1	98	68.553	ENSTNIG00000013214	rcl1	85	68.553	Tetraodon_nigroviridis
ENSCHOG00000007216	RCL1	100	88.235	ENSTBEG00000016339	RCL1	87	88.235	Tupaia_belangeri
ENSCHOG00000007216	RCL1	100	80.495	ENSTTRG00000016525	RCL1	87	80.495	Tursiops_truncatus
ENSCHOG00000007216	RCL1	100	81.734	ENSUAMG00000005598	RCL1	99	81.734	Ursus_americanus
ENSCHOG00000007216	RCL1	86	87.319	ENSUMAG00000017890	RCL1	82	87.319	Ursus_maritimus
ENSCHOG00000007216	RCL1	86	88.768	ENSVPAG00000009188	RCL1	84	88.768	Vicugna_pacos
ENSCHOG00000007216	RCL1	86	87.681	ENSVVUG00000007304	RCL1	75	87.681	Vulpes_vulpes
ENSCHOG00000007216	RCL1	98	65.094	ENSXETG00000000592	rcl1	85	65.094	Xenopus_tropicalis
ENSCHOG00000007216	RCL1	99	69.279	ENSXCOG00000004922	rcl1	86	69.279	Xiphophorus_couchianus
ENSCHOG00000007216	RCL1	99	69.279	ENSXMAG00000022366	RCL1	86	69.279	Xiphophorus_maculatus