EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000007233 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: HPRP4|HPRP4P|PRP4|Prp4p|SNRNP60
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 11618 bases
Position: chrscaffold_5580:11703-23320
Accession: 17349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006412	PRP4	PF08799.11	1.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000007255	PRPF4-201	1356	-	ENSCHOP00000006412	451 (aa)	-	UPI0001F9F7FF

Gene Model

Click here to download ENSCHOG00000007233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000007233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000007233	PRPF4	100	95.796	ENSG00000136875	PRPF4	87	95.796	Homo_sapiens
ENSCHOG00000007233	PRPF4	100	76.235	ENSAPOG00000014132	prpf4	87	76.235	Acanthochromis_polyacanthus
ENSCHOG00000007233	PRPF4	100	95.796	ENSAMEG00000013048	PRPF4	85	95.796	Ailuropoda_melanoleuca
ENSCHOG00000007233	PRPF4	100	76.549	ENSACIG00000005579	prpf4	89	76.549	Amphilophus_citrinellus
ENSCHOG00000007233	PRPF4	100	75.442	ENSAOCG00000005457	prpf4	89	75.442	Amphiprion_ocellaris
ENSCHOG00000007233	PRPF4	100	75.221	ENSAPEG00000000776	prpf4	89	75.221	Amphiprion_percula
ENSCHOG00000007233	PRPF4	100	76.327	ENSATEG00000023013	prpf4	89	76.327	Anabas_testudineus
ENSCHOG00000007233	PRPF4	100	90.265	ENSAPLG00000006534	PRPF4	84	90.265	Anas_platyrhynchos
ENSCHOG00000007233	PRPF4	100	90.929	ENSACAG00000015110	PRPF4	87	90.929	Anolis_carolinensis
ENSCHOG00000007233	PRPF4	100	95.796	ENSANAG00000022464	PRPF4	83	95.796	Aotus_nancymaae
ENSCHOG00000007233	PRPF4	100	76.549	ENSACLG00000019031	prpf4	89	76.549	Astatotilapia_calliptera
ENSCHOG00000007233	PRPF4	100	63.034	ENSAMXG00000006756	prpf4	88	73.230	Astyanax_mexicanus
ENSCHOG00000007233	PRPF4	100	95.354	ENSBTAG00000004571	PRPF4	87	95.354	Bos_taurus
ENSCHOG00000007233	PRPF4	97	45.682	WBGene00007972	prp-4	91	45.111	Caenorhabditis_elegans
ENSCHOG00000007233	PRPF4	100	95.796	ENSCJAG00000017856	PRPF4	87	95.796	Callithrix_jacchus
ENSCHOG00000007233	PRPF4	100	95.796	ENSCAFG00000003224	PRPF4	84	95.796	Canis_familiaris
ENSCHOG00000007233	PRPF4	100	95.796	ENSCAFG00020022637	PRPF4	87	95.796	Canis_lupus_dingo
ENSCHOG00000007233	PRPF4	100	95.575	ENSCHIG00000024648	-	87	95.575	Capra_hircus
ENSCHOG00000007233	PRPF4	100	95.575	ENSTSYG00000010366	PRPF4	87	95.575	Carlito_syrichta
ENSCHOG00000007233	PRPF4	99	86.098	ENSCAPG00000008935	PRPF4	95	86.098	Cavia_aperea
ENSCHOG00000007233	PRPF4	100	95.354	ENSCPOG00000010747	-	87	95.354	Cavia_porcellus
ENSCHOG00000007233	PRPF4	100	88.938	ENSCPOG00000014729	-	87	88.938	Cavia_porcellus
ENSCHOG00000007233	PRPF4	100	95.575	ENSCCAG00000028990	PRPF4	87	95.575	Cebus_capucinus
ENSCHOG00000007233	PRPF4	100	95.796	ENSCATG00000021552	PRPF4	87	95.796	Cercocebus_atys
ENSCHOG00000007233	PRPF4	100	95.575	ENSCLAG00000013448	PRPF4	87	95.575	Chinchilla_lanigera
ENSCHOG00000007233	PRPF4	100	91.372	ENSCPBG00000019136	PRPF4	65	91.372	Chrysemys_picta_bellii
ENSCHOG00000007233	PRPF4	99	60.754	ENSCING00000001299	-	88	60.045	Ciona_intestinalis
ENSCHOG00000007233	PRPF4	99	60.045	ENSCSAVG00000009178	-	99	57.792	Ciona_savignyi
ENSCHOG00000007233	PRPF4	100	95.796	ENSCANG00000003246	PRPF4	87	95.796	Colobus_angolensis_palliatus
ENSCHOG00000007233	PRPF4	100	95.354	ENSCGRG00001016992	Prpf4	87	95.354	Cricetulus_griseus_chok1gshd
ENSCHOG00000007233	PRPF4	100	95.354	ENSCGRG00000017560	Prpf4	87	95.354	Cricetulus_griseus_crigri
ENSCHOG00000007233	PRPF4	100	75.664	ENSCSEG00000020451	prpf4	89	75.664	Cynoglossus_semilaevis
ENSCHOG00000007233	PRPF4	100	80.531	ENSDARG00000067639	prpf4	89	80.531	Danio_rerio
ENSCHOG00000007233	PRPF4	100	95.796	ENSDNOG00000013203	PRPF4	87	95.796	Dasypus_novemcinctus
ENSCHOG00000007233	PRPF4	100	95.575	ENSDORG00000026275	Prpf4	87	95.575	Dipodomys_ordii
ENSCHOG00000007233	PRPF4	99	56.319	FBgn0036733	U4-U6-60K	81	56.541	Drosophila_melanogaster
ENSCHOG00000007233	PRPF4	100	94.469	ENSETEG00000020389	PRPF4	86	94.469	Echinops_telfairi
ENSCHOG00000007233	PRPF4	99	73.969	ENSEBUG00000015229	prpf4	78	74.485	Eptatretus_burgeri
ENSCHOG00000007233	PRPF4	100	95.796	ENSEASG00005022678	PRPF4	87	95.796	Equus_asinus_asinus
ENSCHOG00000007233	PRPF4	100	95.796	ENSECAG00000007072	PRPF4	87	95.796	Equus_caballus
ENSCHOG00000007233	PRPF4	93	78.310	ENSEEUG00000007480	PRPF4	78	78.310	Erinaceus_europaeus
ENSCHOG00000007233	PRPF4	100	80.088	ENSELUG00000007510	prpf4	89	80.088	Esox_lucius
ENSCHOG00000007233	PRPF4	100	95.796	ENSFCAG00000005514	PRPF4	87	95.796	Felis_catus
ENSCHOG00000007233	PRPF4	100	89.175	ENSFALG00000005423	PRPF4	75	89.175	Ficedula_albicollis
ENSCHOG00000007233	PRPF4	100	95.796	ENSFDAG00000005839	PRPF4	87	95.796	Fukomys_damarensis
ENSCHOG00000007233	PRPF4	100	76.106	ENSFHEG00000001300	prpf4	89	76.106	Fundulus_heteroclitus
ENSCHOG00000007233	PRPF4	100	90.487	ENSGALG00000008857	PRPF4	84	90.487	Gallus_gallus
ENSCHOG00000007233	PRPF4	60	73.063	ENSGAFG00000012164	prpf4	56	73.063	Gambusia_affinis
ENSCHOG00000007233	PRPF4	100	70.044	ENSGACG00000015476	prpf4	89	69.604	Gasterosteus_aculeatus
ENSCHOG00000007233	PRPF4	100	90.929	ENSGAGG00000025029	PRPF4	84	90.929	Gopherus_agassizii
ENSCHOG00000007233	PRPF4	100	95.796	ENSGGOG00000006943	PRPF4	87	95.796	Gorilla_gorilla
ENSCHOG00000007233	PRPF4	100	76.706	ENSHBUG00000000562	prpf4	89	76.549	Haplochromis_burtoni
ENSCHOG00000007233	PRPF4	100	74.779	ENSHGLG00000003838	-	85	74.779	Heterocephalus_glaber_female
ENSCHOG00000007233	PRPF4	100	95.354	ENSHGLG00000015191	PRPF4	87	95.354	Heterocephalus_glaber_female
ENSCHOG00000007233	PRPF4	100	79.956	ENSHGLG00000016628	-	88	80.837	Heterocephalus_glaber_female
ENSCHOG00000007233	PRPF4	100	74.779	ENSHGLG00100005571	-	85	74.779	Heterocephalus_glaber_male
ENSCHOG00000007233	PRPF4	100	78.982	ENSIPUG00000017956	PRPF4	89	78.982	Ictalurus_punctatus
ENSCHOG00000007233	PRPF4	100	96.018	ENSSTOG00000027833	PRPF4	87	96.018	Ictidomys_tridecemlineatus
ENSCHOG00000007233	PRPF4	100	95.354	ENSJJAG00000008838	Prpf4	87	95.354	Jaculus_jaculus
ENSCHOG00000007233	PRPF4	100	76.106	ENSKMAG00000013236	prpf4	89	76.106	Kryptolebias_marmoratus
ENSCHOG00000007233	PRPF4	100	75.221	ENSLBEG00000020611	prpf4	89	75.221	Labrus_bergylta
ENSCHOG00000007233	PRPF4	100	79.956	ENSLACG00000016317	PRPF4	87	79.956	Latimeria_chalumnae
ENSCHOG00000007233	PRPF4	100	80.973	ENSLOCG00000000581	prpf4	89	80.973	Lepisosteus_oculatus
ENSCHOG00000007233	PRPF4	100	95.796	ENSLAFG00000018225	PRPF4	87	95.796	Loxodonta_africana
ENSCHOG00000007233	PRPF4	100	95.575	ENSMFAG00000039397	PRPF4	87	95.575	Macaca_fascicularis
ENSCHOG00000007233	PRPF4	100	95.796	ENSMMUG00000005844	PRPF4	87	95.796	Macaca_mulatta
ENSCHOG00000007233	PRPF4	100	85.809	ENSMNEG00000033737	PRPF4	86	86.253	Macaca_nemestrina
ENSCHOG00000007233	PRPF4	100	95.796	ENSMLEG00000040284	PRPF4	87	95.796	Mandrillus_leucophaeus
ENSCHOG00000007233	PRPF4	100	75.885	ENSMAMG00000020141	prpf4	89	75.885	Mastacembelus_armatus
ENSCHOG00000007233	PRPF4	100	76.549	ENSMZEG00005023205	prpf4	89	76.549	Maylandia_zebra
ENSCHOG00000007233	PRPF4	100	90.265	ENSMGAG00000001796	PRPF4	84	90.265	Meleagris_gallopavo
ENSCHOG00000007233	PRPF4	100	95.133	ENSMAUG00000018022	Prpf4	87	95.133	Mesocricetus_auratus
ENSCHOG00000007233	PRPF4	100	95.796	ENSMICG00000015022	PRPF4	87	95.796	Microcebus_murinus
ENSCHOG00000007233	PRPF4	100	95.354	ENSMOCG00000018273	Prpf4	87	95.354	Microtus_ochrogaster
ENSCHOG00000007233	PRPF4	100	74.336	ENSMMOG00000021177	prpf4	89	74.336	Mola_mola
ENSCHOG00000007233	PRPF4	100	93.805	ENSMODG00000025096	-	84	93.805	Monodelphis_domestica
ENSCHOG00000007233	PRPF4	100	93.805	ENSMODG00000004444	-	86	93.805	Monodelphis_domestica
ENSCHOG00000007233	PRPF4	100	76.327	ENSMALG00000013624	prpf4	89	76.327	Monopterus_albus
ENSCHOG00000007233	PRPF4	100	95.354	MGP_CAROLIEiJ_G0026078	Prpf4	87	95.354	Mus_caroli
ENSCHOG00000007233	PRPF4	100	95.354	ENSMUSG00000066148	Prpf4	87	95.354	Mus_musculus
ENSCHOG00000007233	PRPF4	100	95.133	MGP_PahariEiJ_G0028413	Prpf4	87	95.133	Mus_pahari
ENSCHOG00000007233	PRPF4	100	95.354	MGP_SPRETEiJ_G0027042	Prpf4	87	95.354	Mus_spretus
ENSCHOG00000007233	PRPF4	100	95.796	ENSMPUG00000007883	PRPF4	87	95.796	Mustela_putorius_furo
ENSCHOG00000007233	PRPF4	100	95.796	ENSMLUG00000015309	-	84	95.796	Myotis_lucifugus
ENSCHOG00000007233	PRPF4	100	94.248	ENSMLUG00000008626	-	84	94.248	Myotis_lucifugus
ENSCHOG00000007233	PRPF4	100	89.135	ENSNGAG00000000468	Prpf4	86	89.135	Nannospalax_galili
ENSCHOG00000007233	PRPF4	100	76.770	ENSNBRG00000007972	prpf4	89	76.770	Neolamprologus_brichardi
ENSCHOG00000007233	PRPF4	100	95.796	ENSNLEG00000016647	PRPF4	87	95.796	Nomascus_leucogenys
ENSCHOG00000007233	PRPF4	100	94.248	ENSMEUG00000013256	PRPF4	88	94.248	Notamacropus_eugenii
ENSCHOG00000007233	PRPF4	100	95.575	ENSOPRG00000005302	PRPF4	87	95.575	Ochotona_princeps
ENSCHOG00000007233	PRPF4	100	95.796	ENSODEG00000018147	PRPF4	87	95.796	Octodon_degus
ENSCHOG00000007233	PRPF4	100	76.549	ENSONIG00000012671	prpf4	89	76.549	Oreochromis_niloticus
ENSCHOG00000007233	PRPF4	100	95.796	ENSOCUG00000005046	PRPF4	87	95.796	Oryctolagus_cuniculus
ENSCHOG00000007233	PRPF4	100	74.336	ENSORLG00000019641	prpf4	90	74.336	Oryzias_latipes
ENSCHOG00000007233	PRPF4	100	74.336	ENSORLG00020019438	prpf4	90	74.336	Oryzias_latipes_hni
ENSCHOG00000007233	PRPF4	100	74.824	ENSOMEG00000020941	prpf4	89	74.824	Oryzias_melastigma
ENSCHOG00000007233	PRPF4	100	90.687	ENSOGAG00000007802	PRPF4	85	90.687	Otolemur_garnettii
ENSCHOG00000007233	PRPF4	100	95.575	ENSOARG00000006319	PRPF4	84	95.575	Ovis_aries
ENSCHOG00000007233	PRPF4	100	95.796	ENSPPAG00000041797	PRPF4	87	95.796	Pan_paniscus
ENSCHOG00000007233	PRPF4	100	95.796	ENSPPRG00000014360	PRPF4	87	95.796	Panthera_pardus
ENSCHOG00000007233	PRPF4	100	95.796	ENSPTIG00000009574	PRPF4	87	95.796	Panthera_tigris_altaica
ENSCHOG00000007233	PRPF4	100	95.796	ENSPTRG00000021274	PRPF4	87	95.796	Pan_troglodytes
ENSCHOG00000007233	PRPF4	100	95.575	ENSPANG00000025776	PRPF4	83	95.575	Papio_anubis
ENSCHOG00000007233	PRPF4	100	81.195	ENSPKIG00000017259	prpf4	89	81.195	Paramormyrops_kingsleyae
ENSCHOG00000007233	PRPF4	100	90.708	ENSPSIG00000010713	PRPF4	79	90.708	Pelodiscus_sinensis
ENSCHOG00000007233	PRPF4	98	59.259	ENSPMGG00000000997	prpf4	84	58.836	Periophthalmus_magnuspinnatus
ENSCHOG00000007233	PRPF4	100	95.354	ENSPEMG00000024115	Prpf4	87	95.354	Peromyscus_maniculatus_bairdii
ENSCHOG00000007233	PRPF4	100	94.027	ENSPCIG00000003821	PRPF4	88	94.027	Phascolarctos_cinereus
ENSCHOG00000007233	PRPF4	100	69.298	ENSPFOG00000013524	prpf4	88	69.298	Poecilia_formosa
ENSCHOG00000007233	PRPF4	83	71.218	ENSPLAG00000011620	prpf4	81	71.218	Poecilia_latipinna
ENSCHOG00000007233	PRPF4	95	74.021	ENSPMEG00000006813	prpf4	83	74.021	Poecilia_mexicana
ENSCHOG00000007233	PRPF4	100	95.575	ENSPCAG00000002561	PRPF4	88	95.575	Procavia_capensis
ENSCHOG00000007233	PRPF4	100	96.018	ENSPCOG00000011975	PRPF4	87	96.018	Propithecus_coquereli
ENSCHOG00000007233	PRPF4	100	91.814	ENSPVAG00000004708	PRPF4	87	91.814	Pteropus_vampyrus
ENSCHOG00000007233	PRPF4	100	76.549	ENSPNYG00000008013	prpf4	89	76.549	Pundamilia_nyererei
ENSCHOG00000007233	PRPF4	100	80.310	ENSPNAG00000000697	prpf4	89	80.310	Pygocentrus_nattereri
ENSCHOG00000007233	PRPF4	100	95.133	ENSRNOG00000014777	Prpf4	87	95.133	Rattus_norvegicus
ENSCHOG00000007233	PRPF4	100	95.796	ENSRBIG00000040221	PRPF4	87	95.796	Rhinopithecus_bieti
ENSCHOG00000007233	PRPF4	100	95.796	ENSRROG00000040240	PRPF4	87	95.796	Rhinopithecus_roxellana
ENSCHOG00000007233	PRPF4	100	94.248	ENSSHAG00000017658	PRPF4	86	94.248	Sarcophilus_harrisii
ENSCHOG00000007233	PRPF4	100	81.858	ENSSFOG00015008963	prpf4	89	81.858	Scleropages_formosus
ENSCHOG00000007233	PRPF4	100	75.000	ENSSMAG00000008889	prpf4	89	75.000	Scophthalmus_maximus
ENSCHOG00000007233	PRPF4	100	76.235	ENSSDUG00000022083	prpf4	83	76.235	Seriola_dumerili
ENSCHOG00000007233	PRPF4	100	76.235	ENSSLDG00000008115	prpf4	83	76.235	Seriola_lalandi_dorsalis
ENSCHOG00000007233	PRPF4	100	91.150	ENSSPUG00000015582	PRPF4	87	91.150	Sphenodon_punctatus
ENSCHOG00000007233	PRPF4	100	69.890	ENSSPAG00000011286	prpf4	88	69.890	Stegastes_partitus
ENSCHOG00000007233	PRPF4	100	95.796	ENSSSCG00000024648	PRPF4	87	95.796	Sus_scrofa
ENSCHOG00000007233	PRPF4	100	89.602	ENSTGUG00000002623	PRPF4	92	89.602	Taeniopygia_guttata
ENSCHOG00000007233	PRPF4	100	75.221	ENSTRUG00000008853	prpf4	89	75.221	Takifugu_rubripes
ENSCHOG00000007233	PRPF4	100	75.000	ENSTNIG00000013250	prpf4	89	75.000	Tetraodon_nigroviridis
ENSCHOG00000007233	PRPF4	100	86.283	ENSTBEG00000000821	PRPF4	87	86.283	Tupaia_belangeri
ENSCHOG00000007233	PRPF4	94	98.837	ENSTTRG00000003246	PRPF4	85	98.837	Tursiops_truncatus
ENSCHOG00000007233	PRPF4	60	91.481	ENSUAMG00000018288	PRPF4	77	91.481	Ursus_americanus
ENSCHOG00000007233	PRPF4	100	95.133	ENSUMAG00000019375	PRPF4	87	95.133	Ursus_maritimus
ENSCHOG00000007233	PRPF4	100	96.018	ENSVPAG00000005281	PRPF4	87	96.018	Vicugna_pacos
ENSCHOG00000007233	PRPF4	100	94.518	ENSVVUG00000002476	PRPF4	90	94.518	Vulpes_vulpes
ENSCHOG00000007233	PRPF4	80	55.249	ENSXCOG00000006101	prpf4	93	56.650	Xiphophorus_couchianus
ENSCHOG00000007233	PRPF4	90	63.145	ENSXMAG00000002750	prpf4	87	63.938	Xiphophorus_maculatus