EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000007346 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 7061 bases
Position: chrGeneScaffold_7870:4045-11105
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006505	SMN	PF06003.12	4.5e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000007362	-	753	-	ENSCHOP00000006505	251 (aa)	-	UPI0001F9F971

Gene Model

Click here to download ENSCHOG00000007346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000007346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000007346	-	100	74.206	ENSG00000205571	SMN2	81	82.812	Homo_sapiens
ENSCHOG00000007346	-	100	74.206	ENSG00000172062	SMN1	81	82.812	Homo_sapiens
ENSCHOG00000007346	-	77	86.957	ENSAPOG00000011324	smn1	61	80.000	Acanthochromis_polyacanthus
ENSCHOG00000007346	-	67	89.881	ENSAMEG00000003316	-	83	79.365	Ailuropoda_melanoleuca
ENSCHOG00000007346	-	67	53.846	ENSACIG00000019772	-	54	59.589	Amphilophus_citrinellus
ENSCHOG00000007346	-	77	86.957	ENSAOCG00000024444	smn1	88	47.308	Amphiprion_ocellaris
ENSCHOG00000007346	-	77	86.957	ENSAPEG00000016504	smn1	66	80.000	Amphiprion_percula
ENSCHOG00000007346	-	76	45.238	ENSAPLG00000010912	-	66	80.000	Anas_platyrhynchos
ENSCHOG00000007346	-	100	53.906	ENSACAG00000010017	-	70	85.185	Anolis_carolinensis
ENSCHOG00000007346	-	100	72.441	ENSANAG00000032133	-	85	72.441	Aotus_nancymaae
ENSCHOG00000007346	-	100	49.407	ENSACLG00000007308	smn1	60	83.333	Astatotilapia_calliptera
ENSCHOG00000007346	-	100	71.264	ENSBTAG00000005743	SMN2	87	74.502	Bos_taurus
ENSCHOG00000007346	-	100	73.810	ENSCJAG00000016290	-	81	84.375	Callithrix_jacchus
ENSCHOG00000007346	-	100	75.794	ENSCAFG00000007812	SMN	87	78.175	Canis_familiaris
ENSCHOG00000007346	-	100	76.190	ENSCAFG00020019229	-	81	78.175	Canis_lupus_dingo
ENSCHOG00000007346	-	100	71.648	ENSCHIG00000015559	-	85	74.603	Capra_hircus
ENSCHOG00000007346	-	100	76.587	ENSTSYG00000012058	-	83	87.500	Carlito_syrichta
ENSCHOG00000007346	-	66	88.889	ENSCAPG00000011021	-	100	62.719	Cavia_aperea
ENSCHOG00000007346	-	67	79.762	ENSCPOG00000036973	-	86	68.651	Cavia_porcellus
ENSCHOG00000007346	-	67	79.191	ENSCPOG00000012328	-	86	68.482	Cavia_porcellus
ENSCHOG00000007346	-	100	73.016	ENSCCAG00000018127	-	81	84.375	Cebus_capucinus
ENSCHOG00000007346	-	100	74.206	ENSCATG00000037002	-	81	84.375	Cercocebus_atys
ENSCHOG00000007346	-	64	78.916	ENSCLAG00000000284	-	86	68.093	Chinchilla_lanigera
ENSCHOG00000007346	-	100	74.206	ENSCSAG00000015688	-	85	74.206	Chlorocebus_sabaeus
ENSCHOG00000007346	-	100	57.037	ENSCPBG00000010968	-	63	80.000	Chrysemys_picta_bellii
ENSCHOG00000007346	-	100	68.775	ENSCANG00000033324	-	74	92.308	Colobus_angolensis_palliatus
ENSCHOG00000007346	-	100	73.413	ENSCANG00000038242	-	81	85.938	Colobus_angolensis_palliatus
ENSCHOG00000007346	-	67	80.357	ENSCGRG00001017959	-	86	72.222	Cricetulus_griseus_chok1gshd
ENSCHOG00000007346	-	67	80.357	ENSCGRG00000007698	Smn1	86	72.222	Cricetulus_griseus_crigri
ENSCHOG00000007346	-	100	44.118	ENSCSEG00000015227	smn1	50	60.274	Cynoglossus_semilaevis
ENSCHOG00000007346	-	73	79.781	ENSDNOG00000045949	-	69	79.167	Dasypus_novemcinctus
ENSCHOG00000007346	-	90	77.632	ENSDNOG00000007283	-	94	81.579	Dasypus_novemcinctus
ENSCHOG00000007346	-	57	77.778	ENSDORG00000007082	Smn1	84	70.306	Dipodomys_ordii
ENSCHOG00000007346	-	73	73.224	ENSETEG00000001406	-	81	72.024	Echinops_telfairi
ENSCHOG00000007346	-	59	85.714	ENSEBUG00000011902	smn1	57	85.714	Eptatretus_burgeri
ENSCHOG00000007346	-	100	70.635	ENSEASG00005018000	-	89	70.635	Equus_asinus_asinus
ENSCHOG00000007346	-	100	74.603	ENSECAG00000015215	-	87	74.603	Equus_caballus
ENSCHOG00000007346	-	100	44.928	ENSELUG00000018067	smn1	63	80.000	Esox_lucius
ENSCHOG00000007346	-	100	76.190	ENSFCAG00000028292	SMN	87	76.984	Felis_catus
ENSCHOG00000007346	-	100	51.648	ENSFALG00000012320	-	70	80.000	Ficedula_albicollis
ENSCHOG00000007346	-	100	67.416	ENSFDAG00000017683	-	86	70.428	Fukomys_damarensis
ENSCHOG00000007346	-	68	52.941	ENSFHEG00000018508	smn1	54	57.534	Fundulus_heteroclitus
ENSCHOG00000007346	-	71	90.476	ENSGMOG00000017279	smn1	70	73.333	Gadus_morhua
ENSCHOG00000007346	-	100	51.779	ENSGALG00000002430	SMN	74	80.000	Gallus_gallus
ENSCHOG00000007346	-	100	48.425	ENSGAFG00000009501	smn1	67	80.000	Gambusia_affinis
ENSCHOG00000007346	-	100	46.215	ENSGACG00000010584	smn1	66	73.333	Gasterosteus_aculeatus
ENSCHOG00000007346	-	76	83.333	ENSGAGG00000011374	-	72	80.000	Gopherus_agassizii
ENSCHOG00000007346	-	97	41.593	ENSGAGG00000013639	-	50	52.459	Gopherus_agassizii
ENSCHOG00000007346	-	67	82.738	ENSGGOG00000026704	-	78	82.738	Gorilla_gorilla
ENSCHOG00000007346	-	100	71.032	ENSGGOG00000003872	-	89	74.206	Gorilla_gorilla
ENSCHOG00000007346	-	100	49.421	ENSHBUG00000013987	smn1	62	83.333	Haplochromis_burtoni
ENSCHOG00000007346	-	100	66.412	ENSHGLG00000001905	-	87	69.444	Heterocephalus_glaber_female
ENSCHOG00000007346	-	100	66.667	ENSHGLG00000001018	-	86	69.650	Heterocephalus_glaber_female
ENSCHOG00000007346	-	100	66.667	ENSHGLG00100011252	-	86	69.650	Heterocephalus_glaber_male
ENSCHOG00000007346	-	100	67.857	ENSHGLG00100018676	-	91	69.444	Heterocephalus_glaber_male
ENSCHOG00000007346	-	100	42.424	ENSHCOG00000017136	smn1	59	80.000	Hippocampus_comes
ENSCHOG00000007346	-	80	85.185	ENSIPUG00000012580	smn1	56	80.000	Ictalurus_punctatus
ENSCHOG00000007346	-	100	72.619	ENSSTOG00000012288	-	90	76.587	Ictidomys_tridecemlineatus
ENSCHOG00000007346	-	66	62.874	ENSJJAG00000014853	-	85	63.095	Jaculus_jaculus
ENSCHOG00000007346	-	57	58.741	ENSKMAG00000007239	smn1	57	56.579	Kryptolebias_marmoratus
ENSCHOG00000007346	-	61	60.526	ENSLBEG00000022550	smn1	54	60.265	Labrus_bergylta
ENSCHOG00000007346	-	100	48.617	ENSLOCG00000011339	smn1	69	73.333	Lepisosteus_oculatus
ENSCHOG00000007346	-	66	85.380	ENSLAFG00000003425	-	100	67.816	Loxodonta_africana
ENSCHOG00000007346	-	100	70.635	ENSMFAG00000008812	-	85	70.635	Macaca_fascicularis
ENSCHOG00000007346	-	100	74.603	ENSMFAG00000031523	SMN1	81	85.938	Macaca_fascicularis
ENSCHOG00000007346	-	100	69.841	ENSMMUG00000030594	-	85	69.841	Macaca_mulatta
ENSCHOG00000007346	-	100	74.603	ENSMMUG00000020214	SMN1	81	85.938	Macaca_mulatta
ENSCHOG00000007346	-	82	59.135	ENSMNEG00000036423	-	81	59.135	Macaca_nemestrina
ENSCHOG00000007346	-	100	74.603	ENSMNEG00000035094	-	81	85.938	Macaca_nemestrina
ENSCHOG00000007346	-	100	74.603	ENSMLEG00000041902	-	81	85.938	Mandrillus_leucophaeus
ENSCHOG00000007346	-	100	49.804	ENSMAMG00000011034	smn1	50	60.959	Mastacembelus_armatus
ENSCHOG00000007346	-	100	49.802	ENSMZEG00005013634	smn1	62	83.333	Maylandia_zebra
ENSCHOG00000007346	-	76	45.789	ENSMGAG00000008889	-	90	50.000	Meleagris_gallopavo
ENSCHOG00000007346	-	100	70.635	ENSMAUG00000010262	Smn1	86	71.429	Mesocricetus_auratus
ENSCHOG00000007346	-	73	85.246	ENSMICG00000034708	-	75	84.524	Microcebus_murinus
ENSCHOG00000007346	-	67	76.647	ENSMOCG00000017833	Smn1	86	69.323	Microtus_ochrogaster
ENSCHOG00000007346	-	78	86.957	ENSMMOG00000005504	smn1	72	80.000	Mola_mola
ENSCHOG00000007346	-	76	91.667	ENSMODG00000001436	-	85	64.173	Monodelphis_domestica
ENSCHOG00000007346	-	68	56.140	ENSMALG00000008025	smn1	50	61.644	Monopterus_albus
ENSCHOG00000007346	-	100	71.825	MGP_CAROLIEiJ_G0018836	Smn1	86	71.825	Mus_caroli
ENSCHOG00000007346	-	100	71.429	ENSMUSG00000021645	Smn1	86	71.429	Mus_musculus
ENSCHOG00000007346	-	100	67.857	MGP_PahariEiJ_G0015911	Smn1	86	69.841	Mus_pahari
ENSCHOG00000007346	-	100	71.429	MGP_SPRETEiJ_G0019718	Smn1	86	71.429	Mus_spretus
ENSCHOG00000007346	-	67	89.941	ENSMPUG00000014470	-	89	79.447	Mustela_putorius_furo
ENSCHOG00000007346	-	100	75.194	ENSMLUG00000010603	-	83	75.194	Myotis_lucifugus
ENSCHOG00000007346	-	100	72.222	ENSNGAG00000019833	Smn1	87	73.016	Nannospalax_galili
ENSCHOG00000007346	-	100	49.402	ENSNBRG00000023000	smn1	61	83.333	Neolamprologus_brichardi
ENSCHOG00000007346	-	100	73.810	ENSNLEG00000004454	-	81	82.812	Nomascus_leucogenys
ENSCHOG00000007346	-	66	91.667	ENSMEUG00000011393	-	99	60.262	Notamacropus_eugenii
ENSCHOG00000007346	-	67	79.167	ENSOPRG00000002015	-	100	69.170	Ochotona_princeps
ENSCHOG00000007346	-	64	81.481	ENSODEG00000015976	-	88	71.825	Octodon_degus
ENSCHOG00000007346	-	100	49.402	ENSONIG00000011799	smn1	61	83.333	Oreochromis_niloticus
ENSCHOG00000007346	-	100	53.455	ENSOANG00000001626	-	72	83.333	Ornithorhynchus_anatinus
ENSCHOG00000007346	-	77	96.296	ENSOCUG00000017097	-	85	75.000	Oryctolagus_cuniculus
ENSCHOG00000007346	-	77	96.296	ENSOCUG00000026649	-	86	73.152	Oryctolagus_cuniculus
ENSCHOG00000007346	-	100	47.826	ENSORLG00000010552	smn1	51	58.219	Oryzias_latipes
ENSCHOG00000007346	-	100	50.199	ENSORLG00020007936	smn1	67	80.000	Oryzias_latipes_hni
ENSCHOG00000007346	-	58	57.534	ENSORLG00015022425	smn1	51	57.534	Oryzias_latipes_hsok
ENSCHOG00000007346	-	100	48.617	ENSOMEG00000007824	smn1	51	58.784	Oryzias_melastigma
ENSCHOG00000007346	-	100	64.062	ENSOGAG00000031414	-	89	64.062	Otolemur_garnettii
ENSCHOG00000007346	-	100	70.881	ENSOARG00000005425	-	91	74.104	Ovis_aries
ENSCHOG00000007346	-	100	74.206	ENSPPAG00000036640	-	81	82.812	Pan_paniscus
ENSCHOG00000007346	-	100	76.587	ENSPPRG00000005575	-	87	77.381	Panthera_pardus
ENSCHOG00000007346	-	100	77.381	ENSPTIG00000007745	-	87	77.381	Panthera_tigris_altaica
ENSCHOG00000007346	-	100	73.413	ENSPTRG00000016955	-	81	82.812	Pan_troglodytes
ENSCHOG00000007346	-	100	74.603	ENSPANG00000013601	-	81	85.938	Papio_anubis
ENSCHOG00000007346	-	100	71.429	ENSPANG00000000253	-	85	71.429	Papio_anubis
ENSCHOG00000007346	-	100	46.154	ENSPKIG00000011096	smn1	69	76.667	Paramormyrops_kingsleyae
ENSCHOG00000007346	-	78	87.500	ENSPSIG00000014787	-	80	56.693	Pelodiscus_sinensis
ENSCHOG00000007346	-	67	86.957	ENSPMGG00000012285	smn1	65	80.000	Periophthalmus_magnuspinnatus
ENSCHOG00000007346	-	99	37.302	ENSPMAG00000005004	smn1	85	37.302	Petromyzon_marinus
ENSCHOG00000007346	-	76	91.667	ENSPCIG00000025764	-	87	64.173	Phascolarctos_cinereus
ENSCHOG00000007346	-	67	53.846	ENSPFOG00000007786	smn1	51	59.589	Poecilia_formosa
ENSCHOG00000007346	-	100	48.235	ENSPLAG00000012071	smn1	71	80.000	Poecilia_latipinna
ENSCHOG00000007346	-	100	47.843	ENSPMEG00000017085	smn1	71	80.000	Poecilia_mexicana
ENSCHOG00000007346	-	100	49.004	ENSPREG00000005824	smn1	71	80.000	Poecilia_reticulata
ENSCHOG00000007346	-	99	49.600	ENSPPYG00000019189	-	88	80.769	Pongo_abelii
ENSCHOG00000007346	-	100	73.810	ENSPPYG00000015533	-	91	73.810	Pongo_abelii
ENSCHOG00000007346	-	100	72.374	ENSPCAG00000004187	-	75	93.333	Procavia_capensis
ENSCHOG00000007346	-	69	85.632	ENSPCOG00000022307	-	74	85.276	Propithecus_coquereli
ENSCHOG00000007346	-	67	88.095	ENSPVAG00000005977	-	86	78.571	Pteropus_vampyrus
ENSCHOG00000007346	-	100	49.402	ENSPNYG00000014148	smn1	61	83.333	Pundamilia_nyererei
ENSCHOG00000007346	-	67	75.000	ENSRNOG00000018067	Smn1	86	67.857	Rattus_norvegicus
ENSCHOG00000007346	-	100	65.217	ENSRBIG00000036775	-	70	92.308	Rhinopithecus_bieti
ENSCHOG00000007346	-	100	74.206	ENSRBIG00000037052	-	81	85.938	Rhinopithecus_bieti
ENSCHOG00000007346	-	99	64.032	ENSRROG00000031088	-	72	92.308	Rhinopithecus_roxellana
ENSCHOG00000007346	-	100	74.206	ENSRROG00000039399	-	81	85.938	Rhinopithecus_roxellana
ENSCHOG00000007346	-	67	79.762	ENSSBOG00000020112	-	87	68.400	Saimiri_boliviensis_boliviensis
ENSCHOG00000007346	-	100	73.413	ENSSBOG00000011665	-	81	82.812	Saimiri_boliviensis_boliviensis
ENSCHOG00000007346	-	76	91.667	ENSSHAG00000001499	-	91	64.173	Sarcophilus_harrisii
ENSCHOG00000007346	-	100	46.215	ENSSFOG00015015507	smn1	68	76.667	Scleropages_formosus
ENSCHOG00000007346	-	57	91.304	ENSSMAG00000007922	smn1	62	83.333	Scophthalmus_maximus
ENSCHOG00000007346	-	100	45.769	ENSSDUG00000018533	smn1	62	80.000	Seriola_dumerili
ENSCHOG00000007346	-	68	55.556	ENSSLDG00000021135	smn1	50	60.959	Seriola_lalandi_dorsalis
ENSCHOG00000007346	-	67	66.471	ENSSPUG00000000373	-	61	67.251	Sphenodon_punctatus
ENSCHOG00000007346	-	67	82.609	ENSSPAG00000004345	smn1	65	76.667	Stegastes_partitus
ENSCHOG00000007346	-	79	50.251	ENSSSCG00000033865	-	66	84.615	Sus_scrofa
ENSCHOG00000007346	-	77	88.462	ENSSSCG00000029127	-	82	58.730	Sus_scrofa
ENSCHOG00000007346	-	67	87.500	ENSSSCG00000016970	-	86	77.381	Sus_scrofa
ENSCHOG00000007346	-	100	56.078	ENSTGUG00000001548	-	70	80.000	Taeniopygia_guttata
ENSCHOG00000007346	-	61	57.237	ENSTRUG00000000736	smn	59	55.152	Takifugu_rubripes
ENSCHOG00000007346	-	67	85.714	ENSTBEG00000002399	-	81	85.714	Tupaia_belangeri
ENSCHOG00000007346	-	77	96.296	ENSTTRG00000005080	-	85	75.794	Tursiops_truncatus
ENSCHOG00000007346	-	67	90.476	ENSUAMG00000024947	-	62	90.476	Ursus_americanus
ENSCHOG00000007346	-	67	91.071	ENSUMAG00000007842	-	64	80.159	Ursus_maritimus
ENSCHOG00000007346	-	66	96.296	ENSVPAG00000009887	-	61	93.333	Vicugna_pacos
ENSCHOG00000007346	-	100	76.190	ENSVVUG00000006934	-	87	78.175	Vulpes_vulpes
ENSCHOG00000007346	-	99	34.483	ENSXETG00000004912	-	74	62.712	Xenopus_tropicalis
ENSCHOG00000007346	-	100	50.000	ENSXETG00000018189	smn2	68	76.667	Xenopus_tropicalis
ENSCHOG00000007346	-	100	49.004	ENSXMAG00000001521	smn1	67	80.000	Xiphophorus_maculatus