EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000007763 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 9633 bases
Position: chrGeneScaffold_3844:5142-14774
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006875	RRM_1	PF00076.22	1.6e-14	1	1
ENSCHOP00000006875	RRM_3	PF08777.11	4.1e-31	1	1
ENSCHOP00000006875	La	PF05383.17	2.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000007782	SSB-201	1218	-	ENSCHOP00000006875	405 (aa)	-	UPI0001F9F92C

Gene Model

Click here to download ENSCHOG00000007763's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000007763's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000007763	SSB	100	94.118	ENSG00000138385	SSB	100	98.370	Homo_sapiens
ENSCHOG00000007763	SSB	98	54.975	ENSAPOG00000003448	ssb	100	55.419	Acanthochromis_polyacanthus
ENSCHOG00000007763	SSB	100	91.190	ENSAMEG00000010507	SSB	100	91.190	Ailuropoda_melanoleuca
ENSCHOG00000007763	SSB	92	58.824	ENSACIG00000001738	ssb	97	58.824	Amphilophus_citrinellus
ENSCHOG00000007763	SSB	98	55.224	ENSAOCG00000020398	ssb	100	55.911	Amphiprion_ocellaris
ENSCHOG00000007763	SSB	98	55.473	ENSAPEG00000020395	ssb	100	56.158	Amphiprion_percula
ENSCHOG00000007763	SSB	99	58.374	ENSATEG00000016884	ssb	100	58.867	Anabas_testudineus
ENSCHOG00000007763	SSB	100	70.283	ENSAPLG00000006109	SSB	100	71.765	Anas_platyrhynchos
ENSCHOG00000007763	SSB	100	68.049	ENSACAG00000017008	SSB	99	68.049	Anolis_carolinensis
ENSCHOG00000007763	SSB	100	85.185	ENSANAG00000027195	-	100	85.185	Aotus_nancymaae
ENSCHOG00000007763	SSB	99	55.941	ENSACLG00000010798	ssb	100	55.693	Astatotilapia_calliptera
ENSCHOG00000007763	SSB	98	53.676	ENSAMXG00000012606	ssb	100	55.529	Astyanax_mexicanus
ENSCHOG00000007763	SSB	100	94.074	ENSBTAG00000008716	SSB	100	94.074	Bos_taurus
ENSCHOG00000007763	SSB	73	35.099	WBGene00016653	C44E4.4	91	32.520	Caenorhabditis_elegans
ENSCHOG00000007763	SSB	100	93.827	ENSCJAG00000045073	SSB	100	93.827	Callithrix_jacchus
ENSCHOG00000007763	SSB	100	94.335	ENSCAFG00000012418	SSB	100	94.335	Canis_familiaris
ENSCHOG00000007763	SSB	100	94.335	ENSCAFG00020002900	SSB	100	94.335	Canis_lupus_dingo
ENSCHOG00000007763	SSB	100	94.321	ENSCHIG00000022624	-	100	94.321	Capra_hircus
ENSCHOG00000007763	SSB	100	88.148	ENSCHIG00000022196	-	100	88.148	Capra_hircus
ENSCHOG00000007763	SSB	100	94.568	ENSTSYG00000000097	SSB	100	94.568	Carlito_syrichta
ENSCHOG00000007763	SSB	100	95.556	ENSCPOG00000003338	SSB	100	95.556	Cavia_porcellus
ENSCHOG00000007763	SSB	100	94.568	ENSCCAG00000035147	SSB	100	94.568	Cebus_capucinus
ENSCHOG00000007763	SSB	100	73.580	ENSCATG00000036701	SSB	100	73.580	Cercocebus_atys
ENSCHOG00000007763	SSB	100	69.877	ENSCATG00000042909	-	100	69.877	Cercocebus_atys
ENSCHOG00000007763	SSB	100	95.062	ENSCLAG00000015617	-	100	95.062	Chinchilla_lanigera
ENSCHOG00000007763	SSB	98	85.390	ENSCSAG00000018390	-	100	85.390	Chlorocebus_sabaeus
ENSCHOG00000007763	SSB	100	94.321	ENSCSAG00000015200	SSB	89	94.321	Chlorocebus_sabaeus
ENSCHOG00000007763	SSB	100	79.218	ENSCPBG00000006519	SSB	100	79.951	Chrysemys_picta_bellii
ENSCHOG00000007763	SSB	100	94.815	ENSCANG00000027695	SSB	100	94.815	Colobus_angolensis_palliatus
ENSCHOG00000007763	SSB	100	79.506	ENSCANG00000033240	-	100	79.506	Colobus_angolensis_palliatus
ENSCHOG00000007763	SSB	98	73.935	ENSCANG00000028838	-	95	73.935	Colobus_angolensis_palliatus
ENSCHOG00000007763	SSB	100	79.756	ENSCGRG00001024831	Ssb	100	80.976	Cricetulus_griseus_chok1gshd
ENSCHOG00000007763	SSB	100	79.756	ENSCGRG00000005387	Ssb	100	80.976	Cricetulus_griseus_crigri
ENSCHOG00000007763	SSB	98	57.500	ENSCSEG00000011599	ssb	99	58.250	Cynoglossus_semilaevis
ENSCHOG00000007763	SSB	99	58.231	ENSCVAG00000021558	ssb	100	58.722	Cyprinodon_variegatus
ENSCHOG00000007763	SSB	98	56.716	ENSDARG00000029252	ssb	99	56.716	Danio_rerio
ENSCHOG00000007763	SSB	100	96.296	ENSDNOG00000013450	SSB	100	96.296	Dasypus_novemcinctus
ENSCHOG00000007763	SSB	100	84.672	ENSDORG00000005543	Ssb	100	84.672	Dipodomys_ordii
ENSCHOG00000007763	SSB	84	33.621	FBgn0011638	La	92	33.065	Drosophila_melanogaster
ENSCHOG00000007763	SSB	58	95.025	ENSETEG00000004614	-	61	95.025	Echinops_telfairi
ENSCHOG00000007763	SSB	96	47.959	ENSEBUG00000001237	ssb	96	48.214	Eptatretus_burgeri
ENSCHOG00000007763	SSB	100	95.556	ENSEASG00005022835	SSB	100	95.556	Equus_asinus_asinus
ENSCHOG00000007763	SSB	100	95.802	ENSECAG00000018495	SSB	100	95.802	Equus_caballus
ENSCHOG00000007763	SSB	82	88.889	ENSEEUG00000008077	SSB	86	88.889	Erinaceus_europaeus
ENSCHOG00000007763	SSB	98	59.701	ENSELUG00000020929	ssb	100	60.197	Esox_lucius
ENSCHOG00000007763	SSB	100	94.581	ENSFCAG00000011601	SSB	100	94.581	Felis_catus
ENSCHOG00000007763	SSB	100	75.184	ENSFALG00000000930	SSB	100	75.184	Ficedula_albicollis
ENSCHOG00000007763	SSB	100	95.309	ENSFDAG00000000598	SSB	100	95.309	Fukomys_damarensis
ENSCHOG00000007763	SSB	72	54.849	ENSFHEG00000003268	ssb	95	54.902	Fundulus_heteroclitus
ENSCHOG00000007763	SSB	97	55.583	ENSGMOG00000002664	ssb	99	56.328	Gadus_morhua
ENSCHOG00000007763	SSB	100	74.510	ENSGALG00000009677	SSB	100	74.510	Gallus_gallus
ENSCHOG00000007763	SSB	99	55.419	ENSGAFG00000002749	ssb	100	55.665	Gambusia_affinis
ENSCHOG00000007763	SSB	99	54.369	ENSGACG00000005107	ssb	100	54.722	Gasterosteus_aculeatus
ENSCHOG00000007763	SSB	100	78.973	ENSGAGG00000007807	SSB	100	79.218	Gopherus_agassizii
ENSCHOG00000007763	SSB	100	78.025	ENSGGOG00000024891	-	100	78.025	Gorilla_gorilla
ENSCHOG00000007763	SSB	63	89.778	ENSGGOG00000023471	-	100	89.778	Gorilla_gorilla
ENSCHOG00000007763	SSB	99	55.446	ENSHBUG00000006584	ssb	100	55.198	Haplochromis_burtoni
ENSCHOG00000007763	SSB	100	85.679	ENSHGLG00000005832	-	100	85.679	Heterocephalus_glaber_female
ENSCHOG00000007763	SSB	100	86.486	ENSHGLG00000004478	-	100	86.486	Heterocephalus_glaber_female
ENSCHOG00000007763	SSB	100	93.447	ENSHGLG00000017580	-	100	93.447	Heterocephalus_glaber_female
ENSCHOG00000007763	SSB	100	80.988	ENSHGLG00100008767	-	100	80.988	Heterocephalus_glaber_male
ENSCHOG00000007763	SSB	100	93.447	ENSHGLG00100003084	-	100	93.447	Heterocephalus_glaber_male
ENSCHOG00000007763	SSB	98	56.171	ENSHCOG00000019011	ssb	99	56.423	Hippocampus_comes
ENSCHOG00000007763	SSB	97	58.458	ENSIPUG00000003681	SSB	99	58.911	Ictalurus_punctatus
ENSCHOG00000007763	SSB	100	96.049	ENSSTOG00000008416	SSB	100	96.049	Ictidomys_tridecemlineatus
ENSCHOG00000007763	SSB	100	79.669	ENSJJAG00000023158	-	100	79.669	Jaculus_jaculus
ENSCHOG00000007763	SSB	99	68.408	ENSJJAG00000016250	-	99	68.408	Jaculus_jaculus
ENSCHOG00000007763	SSB	99	56.897	ENSKMAG00000017317	ssb	100	57.389	Kryptolebias_marmoratus
ENSCHOG00000007763	SSB	98	54.478	ENSLBEG00000017345	ssb	100	55.419	Labrus_bergylta
ENSCHOG00000007763	SSB	99	65.848	ENSLACG00000014056	SSB	99	68.873	Latimeria_chalumnae
ENSCHOG00000007763	SSB	98	67.332	ENSLOCG00000007933	ssb	99	67.830	Lepisosteus_oculatus
ENSCHOG00000007763	SSB	100	79.753	ENSLAFG00000028909	-	100	79.753	Loxodonta_africana
ENSCHOG00000007763	SSB	100	86.967	ENSLAFG00000000867	-	100	89.810	Loxodonta_africana
ENSCHOG00000007763	SSB	75	69.868	ENSLAFG00000026721	-	99	69.868	Loxodonta_africana
ENSCHOG00000007763	SSB	88	80.672	ENSMFAG00000041478	-	100	80.672	Macaca_fascicularis
ENSCHOG00000007763	SSB	100	94.568	ENSMFAG00000039066	SSB	100	94.568	Macaca_fascicularis
ENSCHOG00000007763	SSB	100	79.259	ENSMMUG00000011724	-	97	79.259	Macaca_mulatta
ENSCHOG00000007763	SSB	99	66.005	ENSMMUG00000039889	-	100	66.253	Macaca_mulatta
ENSCHOG00000007763	SSB	100	94.568	ENSMMUG00000023051	SSB	100	94.568	Macaca_mulatta
ENSCHOG00000007763	SSB	88	80.672	ENSMNEG00000034698	-	100	80.672	Macaca_nemestrina
ENSCHOG00000007763	SSB	100	82.195	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSCHOG00000007763	SSB	100	67.160	ENSMLEG00000042644	-	100	67.160	Mandrillus_leucophaeus
ENSCHOG00000007763	SSB	100	94.568	ENSMLEG00000035717	SSB	100	94.568	Mandrillus_leucophaeus
ENSCHOG00000007763	SSB	99	58.621	ENSMAMG00000004800	ssb	100	59.113	Mastacembelus_armatus
ENSCHOG00000007763	SSB	99	55.941	ENSMZEG00005005749	ssb	100	55.693	Maylandia_zebra
ENSCHOG00000007763	SSB	100	74.510	ENSMGAG00000010328	SSB	99	76.585	Meleagris_gallopavo
ENSCHOG00000007763	SSB	99	95.285	ENSMICG00000028252	-	99	95.285	Microcebus_murinus
ENSCHOG00000007763	SSB	98	87.154	ENSMICG00000033304	-	96	88.859	Microcebus_murinus
ENSCHOG00000007763	SSB	100	79.518	ENSMODG00000008227	-	100	80.241	Monodelphis_domestica
ENSCHOG00000007763	SSB	85	81.761	ENSMODG00000007027	-	99	81.761	Monodelphis_domestica
ENSCHOG00000007763	SSB	100	56.479	ENSMODG00000019271	-	100	57.946	Monodelphis_domestica
ENSCHOG00000007763	SSB	90	58.856	ENSMALG00000008045	ssb	90	59.416	Monopterus_albus
ENSCHOG00000007763	SSB	100	77.910	MGP_CAROLIEiJ_G0023629	-	100	92.391	Mus_caroli
ENSCHOG00000007763	SSB	100	77.435	ENSMUSG00000068882	Ssb	100	92.391	Mus_musculus
ENSCHOG00000007763	SSB	100	77.197	MGP_PahariEiJ_G0025081	-	100	92.391	Mus_pahari
ENSCHOG00000007763	SSB	100	77.435	MGP_SPRETEiJ_G0024551	Ssb	100	92.391	Mus_spretus
ENSCHOG00000007763	SSB	100	95.062	ENSMPUG00000000785	SSB	100	95.062	Mustela_putorius_furo
ENSCHOG00000007763	SSB	100	89.286	ENSMLUG00000016316	SSB	100	89.286	Myotis_lucifugus
ENSCHOG00000007763	SSB	99	56.188	ENSNBRG00000012661	ssb	100	55.941	Neolamprologus_brichardi
ENSCHOG00000007763	SSB	100	67.980	ENSNLEG00000028754	-	100	68.473	Nomascus_leucogenys
ENSCHOG00000007763	SSB	100	94.815	ENSNLEG00000004958	SSB	100	94.815	Nomascus_leucogenys
ENSCHOG00000007763	SSB	61	88.710	ENSMEUG00000001650	-	100	88.710	Notamacropus_eugenii
ENSCHOG00000007763	SSB	72	74.483	ENSOPRG00000008475	-	100	74.483	Ochotona_princeps
ENSCHOG00000007763	SSB	93	88.360	ENSODEG00000004202	-	100	88.360	Octodon_degus
ENSCHOG00000007763	SSB	99	55.446	ENSONIG00000008776	ssb	100	55.198	Oreochromis_niloticus
ENSCHOG00000007763	SSB	100	84.198	ENSOANG00000008543	SSB	100	84.198	Ornithorhynchus_anatinus
ENSCHOG00000007763	SSB	100	95.062	ENSOCUG00000010396	SSB	100	95.062	Oryctolagus_cuniculus
ENSCHOG00000007763	SSB	99	57.635	ENSORLG00000017208	ssb	100	57.882	Oryzias_latipes
ENSCHOG00000007763	SSB	99	57.389	ENSORLG00020022574	ssb	100	57.635	Oryzias_latipes_hni
ENSCHOG00000007763	SSB	99	57.143	ENSORLG00015016592	ssb	100	57.389	Oryzias_latipes_hsok
ENSCHOG00000007763	SSB	98	58.105	ENSOMEG00000003193	ssb	100	59.012	Oryzias_melastigma
ENSCHOG00000007763	SSB	100	88.626	ENSOGAG00000029768	SSB	100	88.626	Otolemur_garnettii
ENSCHOG00000007763	SSB	100	93.827	ENSOARG00000002906	SSB	100	93.827	Ovis_aries
ENSCHOG00000007763	SSB	97	73.858	ENSPPAG00000006189	-	96	77.688	Pan_paniscus
ENSCHOG00000007763	SSB	100	77.037	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSCHOG00000007763	SSB	100	94.118	ENSPPAG00000042673	SSB	100	94.118	Pan_paniscus
ENSCHOG00000007763	SSB	100	94.581	ENSPPRG00000006599	SSB	100	94.581	Panthera_pardus
ENSCHOG00000007763	SSB	100	94.335	ENSPTIG00000011021	SSB	97	94.335	Panthera_tigris_altaica
ENSCHOG00000007763	SSB	100	94.118	ENSPTRG00000012620	SSB	100	94.118	Pan_troglodytes
ENSCHOG00000007763	SSB	100	73.333	ENSPTRG00000042880	-	100	73.333	Pan_troglodytes
ENSCHOG00000007763	SSB	98	64.912	ENSPANG00000031877	-	95	64.912	Papio_anubis
ENSCHOG00000007763	SSB	100	67.160	ENSPANG00000034126	-	100	67.654	Papio_anubis
ENSCHOG00000007763	SSB	100	94.568	ENSPANG00000007440	SSB	100	94.568	Papio_anubis
ENSCHOG00000007763	SSB	98	62.095	ENSPKIG00000019325	ssb	99	62.963	Paramormyrops_kingsleyae
ENSCHOG00000007763	SSB	100	76.528	ENSPSIG00000002265	SSB	93	77.262	Pelodiscus_sinensis
ENSCHOG00000007763	SSB	84	55.331	ENSPMGG00000020075	ssb	91	55.620	Periophthalmus_magnuspinnatus
ENSCHOG00000007763	SSB	81	50.909	ENSPMAG00000002982	ssb	100	46.279	Petromyzon_marinus
ENSCHOG00000007763	SSB	100	84.483	ENSPCIG00000028591	-	100	84.729	Phascolarctos_cinereus
ENSCHOG00000007763	SSB	99	56.897	ENSPFOG00000009650	ssb	100	57.143	Poecilia_formosa
ENSCHOG00000007763	SSB	99	56.650	ENSPLAG00000020498	ssb	100	56.897	Poecilia_latipinna
ENSCHOG00000007763	SSB	99	55.911	ENSPMEG00000001051	ssb	100	56.404	Poecilia_mexicana
ENSCHOG00000007763	SSB	94	56.771	ENSPREG00000003708	ssb	99	57.031	Poecilia_reticulata
ENSCHOG00000007763	SSB	100	94.815	ENSPPYG00000012919	SSB	100	94.815	Pongo_abelii
ENSCHOG00000007763	SSB	95	89.556	ENSPCAG00000010276	SSB	100	89.556	Procavia_capensis
ENSCHOG00000007763	SSB	100	91.605	ENSPCOG00000015741	-	100	91.605	Propithecus_coquereli
ENSCHOG00000007763	SSB	100	83.210	ENSPCOG00000023189	-	100	83.210	Propithecus_coquereli
ENSCHOG00000007763	SSB	87	94.350	ENSPVAG00000006615	SSB	100	94.350	Pteropus_vampyrus
ENSCHOG00000007763	SSB	99	55.941	ENSPNYG00000006444	ssb	100	55.693	Pundamilia_nyererei
ENSCHOG00000007763	SSB	98	56.650	ENSPNAG00000011708	ssb	100	57.767	Pygocentrus_nattereri
ENSCHOG00000007763	SSB	100	78.922	ENSRNOG00000011606	AABR07061825.1	100	78.922	Rattus_norvegicus
ENSCHOG00000007763	SSB	100	78.385	ENSRNOG00000007998	Ssb	100	78.385	Rattus_norvegicus
ENSCHOG00000007763	SSB	100	78.293	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSCHOG00000007763	SSB	100	68.719	ENSRBIG00000029918	-	100	68.719	Rhinopithecus_bieti
ENSCHOG00000007763	SSB	94	77.836	ENSRBIG00000041232	-	98	77.836	Rhinopithecus_bieti
ENSCHOG00000007763	SSB	89	86.464	ENSRBIG00000041608	-	98	86.464	Rhinopithecus_bieti
ENSCHOG00000007763	SSB	98	79.040	ENSRROG00000031684	-	100	79.040	Rhinopithecus_roxellana
ENSCHOG00000007763	SSB	98	85.000	ENSRROG00000034102	-	98	84.925	Rhinopithecus_roxellana
ENSCHOG00000007763	SSB	100	78.325	ENSRROG00000007149	-	100	78.325	Rhinopithecus_roxellana
ENSCHOG00000007763	SSB	100	94.815	ENSRROG00000040346	SSB	100	94.815	Rhinopithecus_roxellana
ENSCHOG00000007763	SSB	100	94.815	ENSSBOG00000027204	SSB	100	94.815	Saimiri_boliviensis_boliviensis
ENSCHOG00000007763	SSB	100	82.020	ENSSHAG00000018062	SSB	100	84.483	Sarcophilus_harrisii
ENSCHOG00000007763	SSB	99	64.548	ENSSFOG00015000550	ssb	100	65.037	Scleropages_formosus
ENSCHOG00000007763	SSB	98	54.386	ENSSMAG00000013885	ssb	99	57.754	Scophthalmus_maximus
ENSCHOG00000007763	SSB	99	57.635	ENSSDUG00000020117	ssb	100	57.882	Seriola_dumerili
ENSCHOG00000007763	SSB	99	55.583	ENSSLDG00000002525	ssb	100	55.583	Seriola_lalandi_dorsalis
ENSCHOG00000007763	SSB	95	84.856	ENSSARG00000007747	SSB	100	84.856	Sorex_araneus
ENSCHOG00000007763	SSB	100	78.133	ENSSPUG00000012112	SSB	100	78.133	Sphenodon_punctatus
ENSCHOG00000007763	SSB	98	55.473	ENSSPAG00000005696	ssb	100	56.158	Stegastes_partitus
ENSCHOG00000007763	SSB	98	78.697	ENSSSCG00000015938	SSB	98	79.500	Sus_scrofa
ENSCHOG00000007763	SSB	100	74.817	ENSTGUG00000007942	SSB	100	74.817	Taeniopygia_guttata
ENSCHOG00000007763	SSB	99	57.178	ENSTRUG00000017839	ssb	100	57.778	Takifugu_rubripes
ENSCHOG00000007763	SSB	90	59.239	ENSTNIG00000000915	ssb	100	59.239	Tetraodon_nigroviridis
ENSCHOG00000007763	SSB	83	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSCHOG00000007763	SSB	100	93.842	ENSTTRG00000002152	SSB	100	93.842	Tursiops_truncatus
ENSCHOG00000007763	SSB	93	96.021	ENSUAMG00000027833	SSB	99	96.021	Ursus_americanus
ENSCHOG00000007763	SSB	100	95.074	ENSUMAG00000013907	SSB	100	95.074	Ursus_maritimus
ENSCHOG00000007763	SSB	100	94.321	ENSVPAG00000007183	SSB	100	94.321	Vicugna_pacos
ENSCHOG00000007763	SSB	100	94.335	ENSVVUG00000016573	SSB	78	94.335	Vulpes_vulpes
ENSCHOG00000007763	SSB	100	58.645	ENSXETG00000025402	ssb	100	60.373	Xenopus_tropicalis
ENSCHOG00000007763	SSB	94	54.569	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSCHOG00000007763	SSB	99	55.665	ENSXMAG00000004888	ssb	100	55.911	Xiphophorus_maculatus