EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000007801 (Gene tree)
Gene ID: -
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 80211 bases
Position: chrGeneScaffold_3888:1790-82000
Accession: 9349
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000006916	zf-C2H2	PF00096.26	2.2e-47	1	8
ENSCHOP00000006916	zf-C2H2	PF00096.26	2.2e-47	2	8
ENSCHOP00000006916	zf-C2H2	PF00096.26	2.2e-47	3	8
ENSCHOP00000006916	zf-C2H2	PF00096.26	2.2e-47	4	8
ENSCHOP00000006916	zf-C2H2	PF00096.26	2.2e-47	5	8
ENSCHOP00000006916	zf-C2H2	PF00096.26	2.2e-47	6	8
ENSCHOP00000006916	zf-C2H2	PF00096.26	2.2e-47	7	8
ENSCHOP00000006916	zf-C2H2	PF00096.26	2.2e-47	8	8
ENSCHOP00000006916	zf-met	PF12874.7	1.4e-14	1	2
ENSCHOP00000006916	zf-met	PF12874.7	1.4e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000007827	PRDM5-201	1776	-	ENSCHOP00000006916	591 (aa)	-	UPI0001F9F9E7

Gene Model

Click here to download ENSCHOG00000007801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000007801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000007801	PRDM5	91	94.000	ENSG00000138738	PRDM5	99	94.000	Homo_sapiens
ENSCHOG00000007801	PRDM5	85	78.322	ENSAPOG00000023220	prdm5	99	78.322	Acanthochromis_polyacanthus
ENSCHOG00000007801	PRDM5	78	92.486	ENSAMEG00000003050	PRDM5	100	92.818	Ailuropoda_melanoleuca
ENSCHOG00000007801	PRDM5	91	78.322	ENSACIG00000000406	prdm5	99	78.322	Amphilophus_citrinellus
ENSCHOG00000007801	PRDM5	91	78.322	ENSAOCG00000014806	prdm5	99	78.322	Amphiprion_ocellaris
ENSCHOG00000007801	PRDM5	91	59.935	ENSAPEG00000016846	prdm5	99	71.818	Amphiprion_percula
ENSCHOG00000007801	PRDM5	91	78.322	ENSATEG00000013829	prdm5	99	78.322	Anabas_testudineus
ENSCHOG00000007801	PRDM5	86	79.720	ENSAPLG00000013828	PRDM5	100	79.720	Anas_platyrhynchos
ENSCHOG00000007801	PRDM5	91	79.371	ENSACAG00000012999	PRDM5	99	79.371	Anolis_carolinensis
ENSCHOG00000007801	PRDM5	89	98.667	ENSANAG00000027411	PRDM5	99	98.667	Aotus_nancymaae
ENSCHOG00000007801	PRDM5	91	78.322	ENSACLG00000017996	prdm5	99	78.322	Astatotilapia_calliptera
ENSCHOG00000007801	PRDM5	73	77.972	ENSAMXG00000041864	prdm5	99	77.972	Astyanax_mexicanus
ENSCHOG00000007801	PRDM5	91	91.600	ENSBTAG00000012111	PRDM5	99	91.600	Bos_taurus
ENSCHOG00000007801	PRDM5	89	98.000	ENSCJAG00000003133	PRDM5	99	98.000	Callithrix_jacchus
ENSCHOG00000007801	PRDM5	82	80.488	ENSCAFG00000004179	PRDM5	100	80.488	Canis_familiaris
ENSCHOG00000007801	PRDM5	91	94.400	ENSCAFG00020017685	PRDM5	99	94.400	Canis_lupus_dingo
ENSCHOG00000007801	PRDM5	91	88.000	ENSCHIG00000018772	PRDM5	99	91.324	Capra_hircus
ENSCHOG00000007801	PRDM5	85	93.182	ENSTSYG00000009630	PRDM5	95	93.182	Carlito_syrichta
ENSCHOG00000007801	PRDM5	80	98.000	ENSCAPG00000015217	PRDM5	100	98.000	Cavia_aperea
ENSCHOG00000007801	PRDM5	80	98.000	ENSCPOG00000012883	PRDM5	100	98.000	Cavia_porcellus
ENSCHOG00000007801	PRDM5	89	98.667	ENSCCAG00000023157	PRDM5	99	98.667	Cebus_capucinus
ENSCHOG00000007801	PRDM5	89	98.667	ENSCATG00000042510	PRDM5	99	98.667	Cercocebus_atys
ENSCHOG00000007801	PRDM5	80	98.000	ENSCLAG00000005392	PRDM5	100	98.000	Chinchilla_lanigera
ENSCHOG00000007801	PRDM5	91	88.112	ENSCSAG00000003729	PRDM5	99	94.064	Chlorocebus_sabaeus
ENSCHOG00000007801	PRDM5	91	79.720	ENSCPBG00000024735	PRDM5	99	79.720	Chrysemys_picta_bellii
ENSCHOG00000007801	PRDM5	89	98.667	ENSCANG00000036807	PRDM5	99	98.667	Colobus_angolensis_palliatus
ENSCHOG00000007801	PRDM5	89	95.333	ENSCGRG00001010581	Prdm5	99	95.333	Cricetulus_griseus_chok1gshd
ENSCHOG00000007801	PRDM5	85	85.609	ENSCGRG00000010996	-	99	85.609	Cricetulus_griseus_crigri
ENSCHOG00000007801	PRDM5	91	77.622	ENSCSEG00000019979	prdm5	99	77.622	Cynoglossus_semilaevis
ENSCHOG00000007801	PRDM5	91	78.322	ENSCVAG00000013692	prdm5	99	78.322	Cyprinodon_variegatus
ENSCHOG00000007801	PRDM5	89	77.895	ENSDARG00000006288	prdm5	99	77.895	Danio_rerio
ENSCHOG00000007801	PRDM5	81	97.436	ENSDNOG00000002009	PRDM5	100	97.436	Dasypus_novemcinctus
ENSCHOG00000007801	PRDM5	89	86.364	ENSDORG00000007739	Prdm5	99	86.364	Dipodomys_ordii
ENSCHOG00000007801	PRDM5	86	88.112	ENSETEG00000020268	PRDM5	100	88.112	Echinops_telfairi
ENSCHOG00000007801	PRDM5	85	76.140	ENSEBUG00000004301	prdm5	99	76.140	Eptatretus_burgeri
ENSCHOG00000007801	PRDM5	89	99.333	ENSEASG00005018365	PRDM5	99	99.333	Equus_asinus_asinus
ENSCHOG00000007801	PRDM5	89	75.958	ENSECAG00000024747	-	99	75.958	Equus_caballus
ENSCHOG00000007801	PRDM5	90	93.600	ENSECAG00000011516	PRDM5	90	93.600	Equus_caballus
ENSCHOG00000007801	PRDM5	84	84.651	ENSEEUG00000010306	PRDM5	86	84.651	Erinaceus_europaeus
ENSCHOG00000007801	PRDM5	90	74.112	ENSELUG00000005894	prdm5	93	74.112	Esox_lucius
ENSCHOG00000007801	PRDM5	91	94.400	ENSFCAG00000025656	PRDM5	99	94.400	Felis_catus
ENSCHOG00000007801	PRDM5	75	80.237	ENSFALG00000008381	PRDM5	99	80.237	Ficedula_albicollis
ENSCHOG00000007801	PRDM5	89	98.000	ENSFDAG00000021361	PRDM5	99	98.000	Fukomys_damarensis
ENSCHOG00000007801	PRDM5	90	78.246	ENSFHEG00000013040	prdm5	99	78.246	Fundulus_heteroclitus
ENSCHOG00000007801	PRDM5	90	82.692	ENSGMOG00000012038	prdm5	99	82.692	Gadus_morhua
ENSCHOG00000007801	PRDM5	91	79.720	ENSGALG00000011963	PRDM5	99	79.720	Gallus_gallus
ENSCHOG00000007801	PRDM5	90	74.112	ENSGAFG00000019233	prdm5	99	72.273	Gambusia_affinis
ENSCHOG00000007801	PRDM5	88	74.000	ENSGAGG00000020362	PRDM5	99	76.923	Gopherus_agassizii
ENSCHOG00000007801	PRDM5	89	98.667	ENSGGOG00000013562	PRDM5	99	98.667	Gorilla_gorilla
ENSCHOG00000007801	PRDM5	91	78.322	ENSHBUG00000023375	prdm5	99	78.322	Haplochromis_burtoni
ENSCHOG00000007801	PRDM5	91	77.143	ENSHGLG00000003010	PRDM5	99	91.781	Heterocephalus_glaber_female
ENSCHOG00000007801	PRDM5	89	98.000	ENSHGLG00100003696	PRDM5	99	98.000	Heterocephalus_glaber_male
ENSCHOG00000007801	PRDM5	89	78.246	ENSHCOG00000012131	prdm5	99	78.246	Hippocampus_comes
ENSCHOG00000007801	PRDM5	91	78.322	ENSIPUG00000001248	prdm5	99	78.322	Ictalurus_punctatus
ENSCHOG00000007801	PRDM5	80	94.000	ENSSTOG00000004741	PRDM5	100	94.000	Ictidomys_tridecemlineatus
ENSCHOG00000007801	PRDM5	80	97.333	ENSJJAG00000011464	Prdm5	100	97.333	Jaculus_jaculus
ENSCHOG00000007801	PRDM5	91	77.972	ENSKMAG00000013663	prdm5	99	77.972	Kryptolebias_marmoratus
ENSCHOG00000007801	PRDM5	91	78.322	ENSLBEG00000022736	prdm5	99	78.322	Labrus_bergylta
ENSCHOG00000007801	PRDM5	82	79.371	ENSLACG00000009187	PRDM5	99	79.371	Latimeria_chalumnae
ENSCHOG00000007801	PRDM5	88	78.246	ENSLOCG00000009778	prdm5	99	78.246	Lepisosteus_oculatus
ENSCHOG00000007801	PRDM5	91	88.112	ENSLAFG00000006532	PRDM5	99	94.064	Loxodonta_africana
ENSCHOG00000007801	PRDM5	89	98.667	ENSMFAG00000045845	PRDM5	99	98.667	Macaca_fascicularis
ENSCHOG00000007801	PRDM5	89	98.667	ENSMMUG00000003249	PRDM5	99	98.667	Macaca_mulatta
ENSCHOG00000007801	PRDM5	89	98.667	ENSMNEG00000019018	PRDM5	99	98.667	Macaca_nemestrina
ENSCHOG00000007801	PRDM5	86	95.000	ENSMLEG00000023145	PRDM5	100	95.000	Mandrillus_leucophaeus
ENSCHOG00000007801	PRDM5	86	77.972	ENSMAMG00000013419	prdm5	99	77.972	Mastacembelus_armatus
ENSCHOG00000007801	PRDM5	91	78.322	ENSMZEG00005020645	prdm5	99	78.322	Maylandia_zebra
ENSCHOG00000007801	PRDM5	86	79.720	ENSMGAG00000010710	PRDM5	100	79.720	Meleagris_gallopavo
ENSCHOG00000007801	PRDM5	89	95.333	ENSMAUG00000006768	Prdm5	99	95.333	Mesocricetus_auratus
ENSCHOG00000007801	PRDM5	89	98.000	ENSMICG00000001459	PRDM5	99	98.000	Microcebus_murinus
ENSCHOG00000007801	PRDM5	89	95.333	ENSMOCG00000016267	Prdm5	99	95.333	Microtus_ochrogaster
ENSCHOG00000007801	PRDM5	91	77.622	ENSMMOG00000006035	prdm5	99	77.622	Mola_mola
ENSCHOG00000007801	PRDM5	91	79.021	ENSMODG00000018942	PRDM5	99	79.021	Monodelphis_domestica
ENSCHOG00000007801	PRDM5	91	72.378	ENSMALG00000013934	prdm5	99	72.378	Monopterus_albus
ENSCHOG00000007801	PRDM5	89	96.000	MGP_CAROLIEiJ_G0028463	Prdm5	99	96.000	Mus_caroli
ENSCHOG00000007801	PRDM5	89	96.000	ENSMUSG00000029913	Prdm5	99	96.000	Mus_musculus
ENSCHOG00000007801	PRDM5	89	96.000	MGP_PahariEiJ_G0022203	Prdm5	99	96.000	Mus_pahari
ENSCHOG00000007801	PRDM5	89	96.000	MGP_SPRETEiJ_G0029467	Prdm5	99	96.000	Mus_spretus
ENSCHOG00000007801	PRDM5	88	93.590	ENSMPUG00000017415	PRDM5	99	93.600	Mustela_putorius_furo
ENSCHOG00000007801	PRDM5	81	79.310	ENSMLUG00000006097	PRDM5	100	79.310	Myotis_lucifugus
ENSCHOG00000007801	PRDM5	89	96.000	ENSNGAG00000018317	Prdm5	99	96.000	Nannospalax_galili
ENSCHOG00000007801	PRDM5	91	64.032	ENSNBRG00000004976	prdm5	99	71.364	Neolamprologus_brichardi
ENSCHOG00000007801	PRDM5	89	98.667	ENSNLEG00000009107	PRDM5	99	98.667	Nomascus_leucogenys
ENSCHOG00000007801	PRDM5	71	86.207	ENSMEUG00000006576	-	71	86.207	Notamacropus_eugenii
ENSCHOG00000007801	PRDM5	83	77.976	ENSOPRG00000011066	-	89	77.976	Ochotona_princeps
ENSCHOG00000007801	PRDM5	89	98.000	ENSODEG00000009133	PRDM5	100	98.000	Octodon_degus
ENSCHOG00000007801	PRDM5	91	78.322	ENSONIG00000003111	prdm5	99	78.322	Oreochromis_niloticus
ENSCHOG00000007801	PRDM5	90	72.189	ENSOANG00000015109	PRDM5	97	72.197	Ornithorhynchus_anatinus
ENSCHOG00000007801	PRDM5	84	92.308	ENSOCUG00000013454	PRDM5	100	92.308	Oryctolagus_cuniculus
ENSCHOG00000007801	PRDM5	91	78.322	ENSORLG00000016247	prdm5	99	78.322	Oryzias_latipes
ENSCHOG00000007801	PRDM5	91	78.322	ENSORLG00020018051	prdm5	99	78.322	Oryzias_latipes_hni
ENSCHOG00000007801	PRDM5	91	78.322	ENSORLG00015013760	prdm5	99	78.322	Oryzias_latipes_hsok
ENSCHOG00000007801	PRDM5	91	78.322	ENSOMEG00000005143	prdm5	99	78.322	Oryzias_melastigma
ENSCHOG00000007801	PRDM5	74	89.474	ENSOGAG00000009996	PRDM5	98	87.821	Otolemur_garnettii
ENSCHOG00000007801	PRDM5	85	88.636	ENSOARG00000015473	PRDM5	100	90.816	Ovis_aries
ENSCHOG00000007801	PRDM5	86	94.595	ENSPPAG00000043045	PRDM5	100	94.712	Pan_paniscus
ENSCHOG00000007801	PRDM5	91	94.400	ENSPPRG00000001020	PRDM5	99	94.400	Panthera_pardus
ENSCHOG00000007801	PRDM5	86	95.000	ENSPTIG00000010807	PRDM5	95	95.000	Panthera_tigris_altaica
ENSCHOG00000007801	PRDM5	89	98.667	ENSPTRG00000016403	PRDM5	99	98.667	Pan_troglodytes
ENSCHOG00000007801	PRDM5	89	98.667	ENSPANG00000023612	PRDM5	99	98.667	Papio_anubis
ENSCHOG00000007801	PRDM5	90	66.532	ENSPKIG00000015492	prdm5	99	66.250	Paramormyrops_kingsleyae
ENSCHOG00000007801	PRDM5	91	79.720	ENSPSIG00000013505	PRDM5	99	79.720	Pelodiscus_sinensis
ENSCHOG00000007801	PRDM5	91	73.776	ENSPMGG00000012622	prdm5	99	73.776	Periophthalmus_magnuspinnatus
ENSCHOG00000007801	PRDM5	62	69.528	ENSPMAG00000005248	prdm5	100	69.528	Petromyzon_marinus
ENSCHOG00000007801	PRDM5	90	86.538	ENSPFOG00000018630	prdm5	99	86.538	Poecilia_formosa
ENSCHOG00000007801	PRDM5	91	78.322	ENSPLAG00000014148	prdm5	99	78.322	Poecilia_latipinna
ENSCHOG00000007801	PRDM5	91	78.322	ENSPMEG00000018002	prdm5	99	78.322	Poecilia_mexicana
ENSCHOG00000007801	PRDM5	91	78.322	ENSPREG00000018366	prdm5	99	78.322	Poecilia_reticulata
ENSCHOG00000007801	PRDM5	91	93.600	ENSPPYG00000015031	PRDM5	99	93.600	Pongo_abelii
ENSCHOG00000007801	PRDM5	86	92.273	ENSPCAG00000011671	PRDM5	100	92.273	Procavia_capensis
ENSCHOG00000007801	PRDM5	89	98.000	ENSPCOG00000022828	PRDM5	99	98.000	Propithecus_coquereli
ENSCHOG00000007801	PRDM5	83	84.266	ENSPVAG00000012309	PRDM5	100	84.266	Pteropus_vampyrus
ENSCHOG00000007801	PRDM5	91	78.322	ENSPNYG00000012194	prdm5	99	78.322	Pundamilia_nyererei
ENSCHOG00000007801	PRDM5	81	73.592	ENSPNAG00000023191	-	99	73.592	Pygocentrus_nattereri
ENSCHOG00000007801	PRDM5	90	78.246	ENSPNAG00000026181	prdm5	99	78.246	Pygocentrus_nattereri
ENSCHOG00000007801	PRDM5	90	81.148	ENSRNOG00000023679	Prdm5	99	84.475	Rattus_norvegicus
ENSCHOG00000007801	PRDM5	89	98.667	ENSRBIG00000041307	PRDM5	99	98.667	Rhinopithecus_bieti
ENSCHOG00000007801	PRDM5	85	95.455	ENSRROG00000035343	PRDM5	100	95.455	Rhinopithecus_roxellana
ENSCHOG00000007801	PRDM5	89	98.667	ENSSBOG00000022100	PRDM5	99	98.667	Saimiri_boliviensis_boliviensis
ENSCHOG00000007801	PRDM5	80	74.619	ENSSHAG00000003250	PRDM5	100	74.619	Sarcophilus_harrisii
ENSCHOG00000007801	PRDM5	89	78.322	ENSSFOG00015020478	prdm5	99	78.322	Scleropages_formosus
ENSCHOG00000007801	PRDM5	91	77.972	ENSSMAG00000018844	prdm5	99	77.972	Scophthalmus_maximus
ENSCHOG00000007801	PRDM5	91	78.322	ENSSDUG00000020397	prdm5	99	78.322	Seriola_dumerili
ENSCHOG00000007801	PRDM5	91	78.322	ENSSLDG00000013353	prdm5	99	78.322	Seriola_lalandi_dorsalis
ENSCHOG00000007801	PRDM5	86	98.291	ENSSARG00000014129	-	80	98.291	Sorex_araneus
ENSCHOG00000007801	PRDM5	89	89.333	ENSSPUG00000009941	PRDM5	99	89.333	Sphenodon_punctatus
ENSCHOG00000007801	PRDM5	91	78.322	ENSSPAG00000013866	prdm5	99	78.322	Stegastes_partitus
ENSCHOG00000007801	PRDM5	91	93.200	ENSSSCG00000009101	PRDM5	99	93.200	Sus_scrofa
ENSCHOG00000007801	PRDM5	86	79.720	ENSTGUG00000001920	PRDM5	100	79.720	Taeniopygia_guttata
ENSCHOG00000007801	PRDM5	91	77.972	ENSTRUG00000013850	prdm5	99	77.972	Takifugu_rubripes
ENSCHOG00000007801	PRDM5	91	77.833	ENSTNIG00000005901	prdm5	99	77.833	Tetraodon_nigroviridis
ENSCHOG00000007801	PRDM5	83	96.154	ENSTBEG00000015386	PRDM5	86	96.154	Tupaia_belangeri
ENSCHOG00000007801	PRDM5	91	93.200	ENSTTRG00000010996	PRDM5	99	93.200	Tursiops_truncatus
ENSCHOG00000007801	PRDM5	85	81.373	ENSUAMG00000009994	PRDM5	84	93.651	Ursus_americanus
ENSCHOG00000007801	PRDM5	82	93.939	ENSUMAG00000003733	PRDM5	99	94.180	Ursus_maritimus
ENSCHOG00000007801	PRDM5	88	93.562	ENSVPAG00000007435	PRDM5	100	93.562	Vicugna_pacos
ENSCHOG00000007801	PRDM5	84	95.673	ENSVVUG00000013192	PRDM5	100	95.673	Vulpes_vulpes
ENSCHOG00000007801	PRDM5	91	72.727	ENSXETG00000002101	prdm5	99	72.727	Xenopus_tropicalis
ENSCHOG00000007801	PRDM5	91	78.322	ENSXCOG00000008567	prdm5	99	78.322	Xiphophorus_couchianus
ENSCHOG00000007801	PRDM5	91	78.322	ENSXMAG00000013825	prdm5	99	78.322	Xiphophorus_maculatus