EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000008173 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 6320 bases
Position: chrGeneScaffold_6141:2012-8331
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	1	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	2	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	3	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	4	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	5	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	6	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	7	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	8	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	9	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	10	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	11	12
ENSCHOP00000007214	zf-C2H2	PF00096.26	4.6e-66	12	12
ENSCHOP00000007214	zf-met	PF12874.7	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008183	-	1785	-	ENSCHOP00000007214	594 (aa)	-	UPI0001F9F9AB

Gene Model

Click here to download ENSCHOG00000008173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000008173	-	70	47.287	ENSCHOG00000004232	-	100	48.230
ENSCHOG00000008173	-	70	46.689	ENSCHOG00000009162	-	88	46.689
ENSCHOG00000008173	-	72	51.111	ENSCHOG00000012657	ZNF227	72	52.300
ENSCHOG00000008173	-	90	58.039	ENSCHOG00000012411	ZNF582	78	58.039
ENSCHOG00000008173	-	70	52.610	ENSCHOG00000003880	ZFP1	79	52.610
ENSCHOG00000008173	-	70	56.442	ENSCHOG00000005861	-	99	56.442
ENSCHOG00000008173	-	76	51.880	ENSCHOG00000006590	ZNF200	53	51.880
ENSCHOG00000008173	-	90	43.966	ENSCHOG00000003808	-	99	43.966
ENSCHOG00000008173	-	73	40.310	ENSCHOG00000007046	-	63	40.310
ENSCHOG00000008173	-	70	49.390	ENSCHOG00000004429	-	75	49.390
ENSCHOG00000008173	-	70	48.209	ENSCHOG00000010443	ZNF233	66	48.619
ENSCHOG00000008173	-	69	40.761	ENSCHOG00000000113	ZFP64	62	40.761
ENSCHOG00000008173	-	70	50.237	ENSCHOG00000000300	-	53	50.237
ENSCHOG00000008173	-	70	50.532	ENSCHOG00000004080	ZNF317	65	50.532
ENSCHOG00000008173	-	70	35.370	ENSCHOG00000009909	ZNF408	54	36.965
ENSCHOG00000008173	-	70	45.787	ENSCHOG00000003944	-	79	46.250
ENSCHOG00000008173	-	70	50.904	ENSCHOG00000011095	ZNF112	76	50.904
ENSCHOG00000008173	-	90	46.875	ENSCHOG00000013069	-	88	44.924
ENSCHOG00000008173	-	70	54.902	ENSCHOG00000008899	-	100	54.902
ENSCHOG00000008173	-	72	50.204	ENSCHOG00000008632	-	68	50.204
ENSCHOG00000008173	-	72	48.943	ENSCHOG00000004832	-	78	48.943
ENSCHOG00000008173	-	73	51.488	ENSCHOG00000010954	-	95	51.488
ENSCHOG00000008173	-	76	98.754	ENSCHOG00000003898	-	100	98.754
ENSCHOG00000008173	-	90	47.568	ENSCHOG00000003925	-	89	46.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008173	-	91	89.312	ENSCAFG00020003589	-	98	89.251	Canis_lupus_dingo
ENSCHOG00000008173	-	91	82.971	ENSTSYG00000008405	-	91	82.971	Carlito_syrichta
ENSCHOG00000008173	-	83	82.806	ENSCAPG00000013118	-	86	83.074	Cavia_aperea
ENSCHOG00000008173	-	91	80.776	ENSCPOG00000034791	-	90	80.776	Cavia_porcellus
ENSCHOG00000008173	-	91	80.961	ENSCLAG00000014648	-	93	80.961	Chinchilla_lanigera
ENSCHOG00000008173	-	91	84.473	ENSCGRG00001021088	Zfp354a	91	84.473	Cricetulus_griseus_chok1gshd
ENSCHOG00000008173	-	91	84.473	ENSCGRG00000015037	Zfp354a	91	84.473	Cricetulus_griseus_crigri
ENSCHOG00000008173	-	76	97.423	ENSDNOG00000043806	-	100	97.423	Dasypus_novemcinctus
ENSCHOG00000008173	-	91	82.963	ENSDORG00000009396	Zfp354a	92	82.037	Dipodomys_ordii
ENSCHOG00000008173	-	86	84.168	ENSETEG00000020249	-	100	84.168	Echinops_telfairi
ENSCHOG00000008173	-	86	84.808	ENSEEUG00000008362	-	100	84.808	Erinaceus_europaeus
ENSCHOG00000008173	-	91	82.440	ENSFDAG00000015190	-	91	82.440	Fukomys_damarensis
ENSCHOG00000008173	-	91	82.070	ENSHGLG00000005975	-	91	82.070	Heterocephalus_glaber_female
ENSCHOG00000008173	-	85	82.283	ENSHGLG00100012284	-	100	82.283	Heterocephalus_glaber_male
ENSCHOG00000008173	-	86	84.961	ENSSTOG00000024118	-	97	84.961	Ictidomys_tridecemlineatus
ENSCHOG00000008173	-	84	85.547	ENSLAFG00000002909	-	100	85.547	Loxodonta_africana
ENSCHOG00000008173	-	86	83.984	ENSMAUG00000000735	Zfp354a	94	83.984	Mesocricetus_auratus
ENSCHOG00000008173	-	91	84.936	ENSMICG00000006390	ZNF354A	91	84.936	Microcebus_murinus
ENSCHOG00000008173	-	91	82.537	ENSMOCG00000003692	Zfp354a	91	82.537	Microtus_ochrogaster
ENSCHOG00000008173	-	91	81.919	MGP_CAROLIEiJ_G0016306	Zfp354a	91	81.919	Mus_caroli
ENSCHOG00000008173	-	91	80.996	ENSMUSG00000020364	Zfp354a	91	80.996	Mus_musculus
ENSCHOG00000008173	-	91	81.146	MGP_PahariEiJ_G0017441	Zfp354a	91	81.146	Mus_pahari
ENSCHOG00000008173	-	91	84.843	ENSNGAG00000011769	Zfp354a	91	84.843	Nannospalax_galili
ENSCHOG00000008173	-	90	82.149	ENSODEG00000008278	-	100	82.149	Octodon_degus
ENSCHOG00000008173	-	91	87.681	ENSPPAG00000039371	ZNF354A	93	87.681	Pan_paniscus
ENSCHOG00000008173	-	85	88.224	ENSPTRG00000017606	ZNF354A	99	83.962	Pan_troglodytes
ENSCHOG00000008173	-	91	82.593	ENSPEMG00000024167	Zfp354a	90	82.593	Peromyscus_maniculatus_bairdii
ENSCHOG00000008173	-	86	85.127	ENSUAMG00000000212	-	90	85.127	Ursus_americanus