EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000008177 (Gene tree)
Gene ID: -
Gene Symbol: FUBP1
Alias: FBP|FUBP
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 31431 bases
Position: chrGeneScaffold_5371:28434-59864
Accession: 4004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007233	KH_1	PF00013.29	8.6e-70	1	4
ENSCHOP00000007233	KH_1	PF00013.29	8.6e-70	2	4
ENSCHOP00000007233	KH_1	PF00013.29	8.6e-70	3	4
ENSCHOP00000007233	KH_1	PF00013.29	8.6e-70	4	4
ENSCHOP00000007233	KH_2	PF07650.17	1.6e-22	1	2
ENSCHOP00000007233	KH_2	PF07650.17	1.6e-22	2	2
ENSCHOP00000007233	DUF1897	PF09005.10	3.8e-12	1	2
ENSCHOP00000007233	DUF1897	PF09005.10	3.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008203	FUBP1-201	1968	-	ENSCHOP00000007233	655 (aa)	-	UPI0001F9F9AF

Gene Model

Click here to download ENSCHOG00000008177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000008177	FUBP1	64	61.194	ENSCHOG00000010987	FUBP3	59	61.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008177	FUBP1	100	99.237	ENSG00000162613	FUBP1	100	99.237	Homo_sapiens
ENSCHOG00000008177	FUBP1	100	69.382	ENSAPOG00000014845	fubp1	70	75.435	Acanthochromis_polyacanthus
ENSCHOG00000008177	FUBP1	98	95.946	ENSAMEG00000007372	FUBP1	99	95.946	Ailuropoda_melanoleuca
ENSCHOG00000008177	FUBP1	98	69.585	ENSACIG00000020024	fubp1	69	73.684	Amphilophus_citrinellus
ENSCHOG00000008177	FUBP1	98	68.259	ENSAPEG00000012232	fubp1	72	76.419	Amphiprion_percula
ENSCHOG00000008177	FUBP1	99	71.537	ENSATEG00000018619	fubp1	70	77.533	Anabas_testudineus
ENSCHOG00000008177	FUBP1	92	97.512	ENSAPLG00000005965	FUBP1	100	97.512	Anas_platyrhynchos
ENSCHOG00000008177	FUBP1	98	86.006	ENSACAG00000006310	FUBP1	96	87.281	Anolis_carolinensis
ENSCHOG00000008177	FUBP1	98	71.472	ENSACLG00000006708	fubp1	72	77.753	Astatotilapia_calliptera
ENSCHOG00000008177	FUBP1	87	77.799	ENSAMXG00000005525	fubp1	64	86.047	Astyanax_mexicanus
ENSCHOG00000008177	FUBP1	100	99.084	ENSCJAG00000007062	FUBP1	100	99.084	Callithrix_jacchus
ENSCHOG00000008177	FUBP1	98	99.378	ENSCAFG00000020361	FUBP1	99	99.378	Canis_familiaris
ENSCHOG00000008177	FUBP1	94	99.024	ENSTSYG00000000148	FUBP1	100	99.024	Carlito_syrichta
ENSCHOG00000008177	FUBP1	57	98.535	ENSCAPG00000011052	-	67	98.535	Cavia_aperea
ENSCHOG00000008177	FUBP1	100	99.088	ENSCPOG00000002757	FUBP1	100	99.088	Cavia_porcellus
ENSCHOG00000008177	FUBP1	100	84.682	ENSCCAG00000036537	FUBP1	100	84.971	Cebus_capucinus
ENSCHOG00000008177	FUBP1	100	99.084	ENSCATG00000042126	FUBP1	100	99.084	Cercocebus_atys
ENSCHOG00000008177	FUBP1	100	99.237	ENSCLAG00000005621	FUBP1	100	99.237	Chinchilla_lanigera
ENSCHOG00000008177	FUBP1	98	99.222	ENSCSAG00000001402	FUBP1	99	99.222	Chlorocebus_sabaeus
ENSCHOG00000008177	FUBP1	100	98.024	ENSCGRG00001007103	Fubp1	100	98.024	Cricetulus_griseus_chok1gshd
ENSCHOG00000008177	FUBP1	94	98.706	ENSCGRG00000003372	Fubp1	100	98.706	Cricetulus_griseus_crigri
ENSCHOG00000008177	FUBP1	98	70.923	ENSCSEG00000021412	fubp1	70	76.368	Cynoglossus_semilaevis
ENSCHOG00000008177	FUBP1	98	69.083	ENSCVAG00000014487	fubp1	60	84.703	Cyprinodon_variegatus
ENSCHOG00000008177	FUBP1	98	69.565	ENSDARG00000029248	fubp1	70	76.559	Danio_rerio
ENSCHOG00000008177	FUBP1	67	71.795	ENSDNOG00000034565	-	82	72.500	Dasypus_novemcinctus
ENSCHOG00000008177	FUBP1	100	99.237	ENSDORG00000016534	Fubp1	100	99.237	Dipodomys_ordii
ENSCHOG00000008177	FUBP1	77	97.983	ENSETEG00000000948	-	62	97.983	Echinops_telfairi
ENSCHOG00000008177	FUBP1	81	46.691	ENSEBUG00000016143	fubp1	64	58.462	Eptatretus_burgeri
ENSCHOG00000008177	FUBP1	100	85.649	ENSEEUG00000001287	FUBP1	100	85.649	Erinaceus_europaeus
ENSCHOG00000008177	FUBP1	98	70.410	ENSELUG00000007990	fubp1	70	74.082	Esox_lucius
ENSCHOG00000008177	FUBP1	98	96.124	ENSFALG00000005768	FUBP1	98	96.124	Ficedula_albicollis
ENSCHOG00000008177	FUBP1	100	99.237	ENSFDAG00000014210	FUBP1	100	99.237	Fukomys_damarensis
ENSCHOG00000008177	FUBP1	98	71.494	ENSFHEG00000005230	fubp1	70	78.166	Fundulus_heteroclitus
ENSCHOG00000008177	FUBP1	98	66.615	ENSGMOG00000003370	fubp1	70	69.737	Gadus_morhua
ENSCHOG00000008177	FUBP1	98	96.744	ENSGALG00000008939	FUBP1	99	96.744	Gallus_gallus
ENSCHOG00000008177	FUBP1	98	70.015	ENSGAFG00000020972	fubp1	91	77.551	Gambusia_affinis
ENSCHOG00000008177	FUBP1	98	70.444	ENSGACG00000016563	fubp1	70	75.658	Gasterosteus_aculeatus
ENSCHOG00000008177	FUBP1	98	70.326	ENSHBUG00000009835	fubp1	85	76.703	Haplochromis_burtoni
ENSCHOG00000008177	FUBP1	71	91.183	ENSHGLG00000002808	-	72	91.009	Heterocephalus_glaber_female
ENSCHOG00000008177	FUBP1	100	98.936	ENSHGLG00000008415	-	100	98.936	Heterocephalus_glaber_female
ENSCHOG00000008177	FUBP1	100	98.936	ENSHGLG00100003417	-	100	98.936	Heterocephalus_glaber_male
ENSCHOG00000008177	FUBP1	71	92.043	ENSHGLG00100001414	-	72	91.667	Heterocephalus_glaber_male
ENSCHOG00000008177	FUBP1	98	68.358	ENSHCOG00000000910	fubp1	70	74.522	Hippocampus_comes
ENSCHOG00000008177	FUBP1	98	74.429	ENSIPUG00000009896	fubp1	70	76.623	Ictalurus_punctatus
ENSCHOG00000008177	FUBP1	100	98.936	ENSSTOG00000014312	FUBP1	100	98.936	Ictidomys_tridecemlineatus
ENSCHOG00000008177	FUBP1	100	96.336	ENSJJAG00000020069	Fubp1	100	98.630	Jaculus_jaculus
ENSCHOG00000008177	FUBP1	98	70.507	ENSKMAG00000018897	fubp1	69	76.211	Kryptolebias_marmoratus
ENSCHOG00000008177	FUBP1	98	67.344	ENSLBEG00000012700	fubp1	72	74.580	Labrus_bergylta
ENSCHOG00000008177	FUBP1	96	71.344	ENSLOCG00000003745	fubp1	92	73.975	Lepisosteus_oculatus
ENSCHOG00000008177	FUBP1	100	96.006	ENSLAFG00000003273	FUBP1	99	97.834	Loxodonta_africana
ENSCHOG00000008177	FUBP1	100	99.084	ENSMFAG00000031825	FUBP1	100	99.084	Macaca_fascicularis
ENSCHOG00000008177	FUBP1	100	99.084	ENSMMUG00000002899	FUBP1	100	99.084	Macaca_mulatta
ENSCHOG00000008177	FUBP1	100	99.084	ENSMNEG00000045212	FUBP1	100	99.084	Macaca_nemestrina
ENSCHOG00000008177	FUBP1	98	71.692	ENSMZEG00005024298	fubp1	70	78.166	Maylandia_zebra
ENSCHOG00000008177	FUBP1	92	97.025	ENSMGAG00000009424	FUBP1	99	97.025	Meleagris_gallopavo
ENSCHOG00000008177	FUBP1	100	98.632	ENSMAUG00000016428	Fubp1	100	98.632	Mesocricetus_auratus
ENSCHOG00000008177	FUBP1	100	98.176	ENSMOCG00000014751	Fubp1	100	98.176	Microtus_ochrogaster
ENSCHOG00000008177	FUBP1	87	74.364	ENSMMOG00000019463	fubp1	64	82.817	Mola_mola
ENSCHOG00000008177	FUBP1	94	90.723	ENSMODG00000020804	FUBP1	100	90.723	Monodelphis_domestica
ENSCHOG00000008177	FUBP1	98	70.795	ENSMALG00000015173	fubp1	70	76.638	Monopterus_albus
ENSCHOG00000008177	FUBP1	100	98.168	MGP_CAROLIEiJ_G0025740	Fubp1	100	98.168	Mus_caroli
ENSCHOG00000008177	FUBP1	100	97.863	ENSMUSG00000028034	Fubp1	100	97.863	Mus_musculus
ENSCHOG00000008177	FUBP1	100	98.321	MGP_PahariEiJ_G0027191	Fubp1	100	98.321	Mus_pahari
ENSCHOG00000008177	FUBP1	100	98.015	MGP_SPRETEiJ_G0026693	Fubp1	100	98.015	Mus_spretus
ENSCHOG00000008177	FUBP1	98	95.366	ENSMLUG00000014802	FUBP1	99	95.366	Myotis_lucifugus
ENSCHOG00000008177	FUBP1	100	94.377	ENSNGAG00000014302	Fubp1	98	98.630	Nannospalax_galili
ENSCHOG00000008177	FUBP1	98	68.062	ENSNBRG00000015099	fubp1	72	77.753	Neolamprologus_brichardi
ENSCHOG00000008177	FUBP1	100	95.282	ENSNLEG00000009772	FUBP1	100	95.282	Nomascus_leucogenys
ENSCHOG00000008177	FUBP1	90	100.000	ENSMEUG00000007917	-	79	100.000	Notamacropus_eugenii
ENSCHOG00000008177	FUBP1	91	97.945	ENSOPRG00000001175	FUBP1	91	97.945	Ochotona_princeps
ENSCHOG00000008177	FUBP1	98	66.978	ENSODEG00000003657	-	99	66.199	Octodon_degus
ENSCHOG00000008177	FUBP1	100	99.389	ENSODEG00000002600	-	100	99.389	Octodon_degus
ENSCHOG00000008177	FUBP1	98	70.282	ENSONIG00000018381	fubp1	69	78.166	Oreochromis_niloticus
ENSCHOG00000008177	FUBP1	87	92.562	ENSOANG00000009777	FUBP1	99	92.397	Ornithorhynchus_anatinus
ENSCHOG00000008177	FUBP1	98	67.496	ENSORLG00000003540	fubp1	71	77.533	Oryzias_latipes
ENSCHOG00000008177	FUBP1	98	69.424	ENSORLG00020005908	fubp1	70	76.872	Oryzias_latipes_hni
ENSCHOG00000008177	FUBP1	98	70.762	ENSORLG00015008779	fubp1	70	76.872	Oryzias_latipes_hsok
ENSCHOG00000008177	FUBP1	98	70.497	ENSOMEG00000021943	fubp1	70	75.991	Oryzias_melastigma
ENSCHOG00000008177	FUBP1	98	95.373	ENSOGAG00000014233	FUBP1	99	95.373	Otolemur_garnettii
ENSCHOG00000008177	FUBP1	98	96.078	ENSOARG00000013259	FUBP1	99	95.928	Ovis_aries
ENSCHOG00000008177	FUBP1	100	99.389	ENSPPRG00000000413	FUBP1	100	99.389	Panthera_pardus
ENSCHOG00000008177	FUBP1	100	99.389	ENSPTIG00000019450	FUBP1	100	99.389	Panthera_tigris_altaica
ENSCHOG00000008177	FUBP1	93	96.072	ENSPSIG00000012965	FUBP1	99	96.791	Pelodiscus_sinensis
ENSCHOG00000008177	FUBP1	100	97.720	ENSPEMG00000021802	Fubp1	100	97.945	Peromyscus_maniculatus_bairdii
ENSCHOG00000008177	FUBP1	57	62.393	ENSPMAG00000001644	-	90	63.514	Petromyzon_marinus
ENSCHOG00000008177	FUBP1	98	68.154	ENSPLAG00000021170	fubp1	72	78.166	Poecilia_latipinna
ENSCHOG00000008177	FUBP1	98	72.868	ENSPMEG00000004747	fubp1	73	78.166	Poecilia_mexicana
ENSCHOG00000008177	FUBP1	98	71.603	ENSPREG00000017911	fubp1	70	78.166	Poecilia_reticulata
ENSCHOG00000008177	FUBP1	76	99.351	ENSPPYG00000001219	-	70	99.351	Pongo_abelii
ENSCHOG00000008177	FUBP1	100	99.084	ENSPCAG00000012617	FUBP1	100	99.084	Procavia_capensis
ENSCHOG00000008177	FUBP1	100	99.389	ENSPCOG00000024974	FUBP1	100	99.389	Propithecus_coquereli
ENSCHOG00000008177	FUBP1	100	94.962	ENSPVAG00000014637	FUBP1	100	94.962	Pteropus_vampyrus
ENSCHOG00000008177	FUBP1	98	71.516	ENSPNYG00000004552	fubp1	73	78.194	Pundamilia_nyererei
ENSCHOG00000008177	FUBP1	98	71.366	ENSPNAG00000016207	fubp1	87	77.007	Pygocentrus_nattereri
ENSCHOG00000008177	FUBP1	98	97.988	ENSRNOG00000043370	Fubp1	99	97.988	Rattus_norvegicus
ENSCHOG00000008177	FUBP1	98	99.222	ENSRBIG00000042950	FUBP1	99	99.222	Rhinopithecus_bieti
ENSCHOG00000008177	FUBP1	98	99.222	ENSRROG00000043534	FUBP1	99	99.222	Rhinopithecus_roxellana
ENSCHOG00000008177	FUBP1	100	99.084	ENSSBOG00000027299	FUBP1	100	99.084	Saimiri_boliviensis_boliviensis
ENSCHOG00000008177	FUBP1	94	97.577	ENSSHAG00000005367	FUBP1	100	97.577	Sarcophilus_harrisii
ENSCHOG00000008177	FUBP1	97	74.375	ENSSFOG00015010213	fubp1	70	79.167	Scleropages_formosus
ENSCHOG00000008177	FUBP1	98	70.075	ENSSDUG00000007383	fubp1	68	76.119	Seriola_dumerili
ENSCHOG00000008177	FUBP1	98	70.120	ENSSLDG00000022863	fubp1	72	76.535	Seriola_lalandi_dorsalis
ENSCHOG00000008177	FUBP1	100	97.491	ENSSARG00000011730	FUBP1	57	98.969	Sorex_araneus
ENSCHOG00000008177	FUBP1	98	88.554	ENSSPUG00000008389	FUBP1	99	86.384	Sphenodon_punctatus
ENSCHOG00000008177	FUBP1	98	72.446	ENSSPAG00000010161	fubp1	69	77.533	Stegastes_partitus
ENSCHOG00000008177	FUBP1	92	96.388	ENSTGUG00000006841	FUBP1	100	96.388	Taeniopygia_guttata
ENSCHOG00000008177	FUBP1	91	72.305	ENSTRUG00000004615	fubp1	65	77.511	Takifugu_rubripes
ENSCHOG00000008177	FUBP1	82	100.000	ENSTBEG00000017333	FUBP1	67	100.000	Tupaia_belangeri
ENSCHOG00000008177	FUBP1	100	99.237	ENSTTRG00000000096	FUBP1	100	99.237	Tursiops_truncatus
ENSCHOG00000008177	FUBP1	99	99.231	ENSVPAG00000004709	FUBP1	100	99.231	Vicugna_pacos
ENSCHOG00000008177	FUBP1	98	68.615	ENSXCOG00000019354	fubp1	72	76.638	Xiphophorus_couchianus
ENSCHOG00000008177	FUBP1	95	71.835	ENSXMAG00000007168	fubp1	73	77.948	Xiphophorus_maculatus