EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000008388 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 10137 bases
Position: chrGeneScaffold_3454:775-10911
Accession: 25930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007420	PRP38	PF03371.15	8.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008409	PRPF38A-201	936	-	ENSCHOP00000007420	311 (aa)	-	UPI0001F9FC37

Gene Model

Click here to download ENSCHOG00000008388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008388	PRPF38A	77	97.917	ENSG00000134748	PRPF38A	78	97.917	Homo_sapiens
ENSCHOG00000008388	PRPF38A	77	97.917	ENSAMEG00000009319	PRPF38A	78	97.917	Ailuropoda_melanoleuca
ENSCHOG00000008388	PRPF38A	57	93.548	ENSAPLG00000005827	PRPF38A	71	93.548	Anas_platyrhynchos
ENSCHOG00000008388	PRPF38A	77	95.833	ENSACAG00000008249	PRPF38A	78	95.833	Anolis_carolinensis
ENSCHOG00000008388	PRPF38A	77	97.917	ENSANAG00000027839	PRPF38A	78	97.917	Aotus_nancymaae
ENSCHOG00000008388	PRPF38A	76	73.944	ENSANAG00000029204	-	74	80.282	Aotus_nancymaae
ENSCHOG00000008388	PRPF38A	77	95.833	ENSAMXG00000029274	prpf38a	78	95.833	Astyanax_mexicanus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSBTAG00000002720	PRPF38A	78	97.917	Bos_taurus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCJAG00000021594	PRPF38A	78	97.917	Callithrix_jacchus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCAFG00000003740	PRPF38A	78	97.917	Canis_familiaris
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCAFG00020010939	PRPF38A	78	97.917	Canis_lupus_dingo
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCHIG00000024730	PRPF38A	78	97.917	Capra_hircus
ENSCHOG00000008388	PRPF38A	64	94.340	ENSTSYG00000031994	-	71	94.340	Carlito_syrichta
ENSCHOG00000008388	PRPF38A	77	97.917	ENSTSYG00000009868	-	78	97.917	Carlito_syrichta
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCPOG00000005079	PRPF38A	78	97.917	Cavia_porcellus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCCAG00000026502	PRPF38A	77	97.917	Cebus_capucinus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCATG00000032296	PRPF38A	78	97.917	Cercocebus_atys
ENSCHOG00000008388	PRPF38A	76	65.714	ENSCATG00000044190	-	77	63.571	Cercocebus_atys
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCLAG00000005816	PRPF38A	78	97.917	Chinchilla_lanigera
ENSCHOG00000008388	PRPF38A	77	96.875	ENSCPBG00000014791	PRPF38A	78	96.875	Chrysemys_picta_bellii
ENSCHOG00000008388	PRPF38A	73	97.917	ENSCANG00000032608	PRPF38A	77	97.917	Colobus_angolensis_palliatus
ENSCHOG00000008388	PRPF38A	51	84.375	ENSCGRG00001002557	-	59	84.375	Cricetulus_griseus_chok1gshd
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCGRG00001018502	-	78	97.917	Cricetulus_griseus_chok1gshd
ENSCHOG00000008388	PRPF38A	77	97.917	ENSCGRG00000014868	Prpf38a	78	97.917	Cricetulus_griseus_crigri
ENSCHOG00000008388	PRPF38A	77	93.750	ENSDARG00000039213	prpf38a	78	93.750	Danio_rerio
ENSCHOG00000008388	PRPF38A	77	97.917	ENSDNOG00000042326	PRPF38A	78	97.917	Dasypus_novemcinctus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSDORG00000023857	-	95	97.917	Dipodomys_ordii
ENSCHOG00000008388	PRPF38A	62	93.750	ENSDORG00000023691	-	56	93.750	Dipodomys_ordii
ENSCHOG00000008388	PRPF38A	62	93.750	ENSDORG00000025371	-	56	93.750	Dipodomys_ordii
ENSCHOG00000008388	PRPF38A	77	91.667	ENSEBUG00000012588	prpf38a	77	91.667	Eptatretus_burgeri
ENSCHOG00000008388	PRPF38A	77	97.917	ENSEASG00005014427	PRPF38A	78	97.917	Equus_asinus_asinus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSECAG00000022628	PRPF38A	78	97.917	Equus_caballus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSFCAG00000002518	PRPF38A	78	97.917	Felis_catus
ENSCHOG00000008388	PRPF38A	64	90.909	ENSFALG00000005598	-	74	90.909	Ficedula_albicollis
ENSCHOG00000008388	PRPF38A	77	88.542	ENSFALG00000003612	-	55	88.542	Ficedula_albicollis
ENSCHOG00000008388	PRPF38A	77	97.917	ENSFDAG00000011287	PRPF38A	78	97.917	Fukomys_damarensis
ENSCHOG00000008388	PRPF38A	77	95.833	ENSGALG00000010627	PRPF38A	78	95.833	Gallus_gallus
ENSCHOG00000008388	PRPF38A	77	96.875	ENSGAGG00000020547	PRPF38A	78	96.875	Gopherus_agassizii
ENSCHOG00000008388	PRPF38A	77	97.917	ENSGGOG00000003940	PRPF38A	78	97.917	Gorilla_gorilla
ENSCHOG00000008388	PRPF38A	75	90.805	ENSHGLG00000007918	-	76	90.805	Heterocephalus_glaber_female
ENSCHOG00000008388	PRPF38A	77	97.917	ENSHGLG00000000475	PRPF38A	78	97.917	Heterocephalus_glaber_female
ENSCHOG00000008388	PRPF38A	75	90.805	ENSHGLG00100003928	-	76	90.805	Heterocephalus_glaber_male
ENSCHOG00000008388	PRPF38A	77	97.917	ENSHGLG00100008935	PRPF38A	78	97.917	Heterocephalus_glaber_male
ENSCHOG00000008388	PRPF38A	77	97.917	ENSSTOG00000015610	PRPF38A	78	97.917	Ictidomys_tridecemlineatus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSJJAG00000015811	Prpf38a	78	97.917	Jaculus_jaculus
ENSCHOG00000008388	PRPF38A	77	94.792	ENSLACG00000011495	PRPF38A	78	94.792	Latimeria_chalumnae
ENSCHOG00000008388	PRPF38A	77	97.917	ENSLAFG00000025862	PRPF38A	78	97.917	Loxodonta_africana
ENSCHOG00000008388	PRPF38A	77	97.917	ENSMFAG00000039449	PRPF38A	78	97.917	Macaca_fascicularis
ENSCHOG00000008388	PRPF38A	64	94.545	ENSMMUG00000014333	PRPF38A	73	92.857	Macaca_mulatta
ENSCHOG00000008388	PRPF38A	77	97.917	ENSMNEG00000031221	PRPF38A	78	97.917	Macaca_nemestrina
ENSCHOG00000008388	PRPF38A	76	67.143	ENSMNEG00000040242	-	77	67.376	Macaca_nemestrina
ENSCHOG00000008388	PRPF38A	77	97.917	ENSMLEG00000041105	PRPF38A	78	97.917	Mandrillus_leucophaeus
ENSCHOG00000008388	PRPF38A	73	95.833	ENSMGAG00000011176	PRPF38A	77	95.833	Meleagris_gallopavo
ENSCHOG00000008388	PRPF38A	62	92.708	ENSMAUG00000018029	-	62	92.708	Mesocricetus_auratus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSMICG00000014193	PRPF38A	78	97.917	Microcebus_murinus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSMOCG00000013080	Prpf38a	78	97.917	Microtus_ochrogaster
ENSCHOG00000008388	PRPF38A	77	97.917	ENSMODG00000000644	PRPF38A	78	97.917	Monodelphis_domestica
ENSCHOG00000008388	PRPF38A	77	96.875	MGP_CAROLIEiJ_G0026269	Prpf38a	78	96.875	Mus_caroli
ENSCHOG00000008388	PRPF38A	77	96.875	ENSMUSG00000063800	Prpf38a	78	96.875	Mus_musculus
ENSCHOG00000008388	PRPF38A	77	96.875	MGP_PahariEiJ_G0028602	Prpf38a	78	96.875	Mus_pahari
ENSCHOG00000008388	PRPF38A	77	96.875	MGP_SPRETEiJ_G0027238	Prpf38a	78	96.875	Mus_spretus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSMPUG00000006896	PRPF38A	78	97.917	Mustela_putorius_furo
ENSCHOG00000008388	PRPF38A	77	97.917	ENSNGAG00000011884	Prpf38a	78	97.917	Nannospalax_galili
ENSCHOG00000008388	PRPF38A	75	80.851	ENSNLEG00000033398	-	80	80.142	Nomascus_leucogenys
ENSCHOG00000008388	PRPF38A	70	97.260	ENSNLEG00000017999	PRPF38A	70	97.260	Nomascus_leucogenys
ENSCHOG00000008388	PRPF38A	66	80.282	ENSNLEG00000012592	-	78	80.882	Nomascus_leucogenys
ENSCHOG00000008388	PRPF38A	77	97.917	ENSMEUG00000003860	PRPF38A	78	97.917	Notamacropus_eugenii
ENSCHOG00000008388	PRPF38A	51	97.917	ENSOPRG00000008985	PRPF38A	69	97.917	Ochotona_princeps
ENSCHOG00000008388	PRPF38A	77	97.917	ENSODEG00000005869	PRPF38A	78	97.917	Octodon_degus
ENSCHOG00000008388	PRPF38A	70	89.726	ENSOANG00000009541	-	73	89.041	Ornithorhynchus_anatinus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSOCUG00000000963	PRPF38A	78	97.917	Oryctolagus_cuniculus
ENSCHOG00000008388	PRPF38A	74	95.833	ENSORLG00000013485	prpf38a	77	95.833	Oryzias_latipes
ENSCHOG00000008388	PRPF38A	74	95.833	ENSORLG00020002130	prpf38a	77	95.833	Oryzias_latipes_hni
ENSCHOG00000008388	PRPF38A	74	95.833	ENSORLG00015021393	prpf38a	77	95.833	Oryzias_latipes_hsok
ENSCHOG00000008388	PRPF38A	77	97.917	ENSOGAG00000005423	PRPF38A	78	97.917	Otolemur_garnettii
ENSCHOG00000008388	PRPF38A	77	97.917	ENSOARG00000005373	PRPF38A	78	97.917	Ovis_aries
ENSCHOG00000008388	PRPF38A	73	82.292	ENSPPAG00000033867	-	80	82.292	Pan_paniscus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPPAG00000030905	PRPF38A	78	97.917	Pan_paniscus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPPRG00000013268	PRPF38A	78	97.917	Panthera_pardus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPTIG00000015419	PRPF38A	78	97.917	Panthera_tigris_altaica
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPTRG00000000739	PRPF38A	78	97.917	Pan_troglodytes
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPANG00000015483	PRPF38A	78	97.917	Papio_anubis
ENSCHOG00000008388	PRPF38A	77	96.875	ENSPSIG00000017487	PRPF38A	78	96.875	Pelodiscus_sinensis
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPEMG00000023277	-	78	97.917	Peromyscus_maniculatus_bairdii
ENSCHOG00000008388	PRPF38A	75	97.701	ENSPEMG00000011212	-	77	97.701	Peromyscus_maniculatus_bairdii
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPCIG00000022369	-	78	97.917	Phascolarctos_cinereus
ENSCHOG00000008388	PRPF38A	73	95.833	ENSPFOG00000004248	prpf38a	78	95.833	Poecilia_formosa
ENSCHOG00000008388	PRPF38A	77	93.151	ENSPPYG00000001348	PRPF38A	78	92.466	Pongo_abelii
ENSCHOG00000008388	PRPF38A	77	96.875	ENSPCAG00000013328	PRPF38A	78	96.875	Procavia_capensis
ENSCHOG00000008388	PRPF38A	77	81.250	ENSPCOG00000020709	-	76	81.250	Propithecus_coquereli
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPCOG00000016387	-	78	97.917	Propithecus_coquereli
ENSCHOG00000008388	PRPF38A	77	97.917	ENSPVAG00000009803	PRPF38A	78	97.917	Pteropus_vampyrus
ENSCHOG00000008388	PRPF38A	77	94.792	ENSPNAG00000010399	prpf38a	78	94.792	Pygocentrus_nattereri
ENSCHOG00000008388	PRPF38A	77	96.875	ENSRNOG00000009451	Prpf38a	78	96.875	Rattus_norvegicus
ENSCHOG00000008388	PRPF38A	77	77.083	ENSRBIG00000034053	-	94	77.083	Rhinopithecus_bieti
ENSCHOG00000008388	PRPF38A	77	97.917	ENSRBIG00000036442	PRPF38A	78	97.917	Rhinopithecus_bieti
ENSCHOG00000008388	PRPF38A	77	97.917	ENSRROG00000032788	PRPF38A	78	97.917	Rhinopithecus_roxellana
ENSCHOG00000008388	PRPF38A	77	80.208	ENSRROG00000034606	-	94	80.208	Rhinopithecus_roxellana
ENSCHOG00000008388	PRPF38A	74	72.917	ENSRROG00000040003	-	74	72.917	Rhinopithecus_roxellana
ENSCHOG00000008388	PRPF38A	77	97.917	ENSSBOG00000019515	PRPF38A	78	97.917	Saimiri_boliviensis_boliviensis
ENSCHOG00000008388	PRPF38A	64	94.444	ENSSHAG00000006906	-	74	94.444	Sarcophilus_harrisii
ENSCHOG00000008388	PRPF38A	60	100.000	ENSSARG00000014458	PRPF38A	61	100.000	Sorex_araneus
ENSCHOG00000008388	PRPF38A	77	96.875	ENSSPUG00000013259	PRPF38A	78	96.875	Sphenodon_punctatus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSSSCG00000028288	PRPF38A	78	97.917	Sus_scrofa
ENSCHOG00000008388	PRPF38A	77	89.726	ENSTGUG00000008995	PRPF38A	78	89.041	Taeniopygia_guttata
ENSCHOG00000008388	PRPF38A	77	97.917	ENSTBEG00000000725	PRPF38A	78	97.917	Tupaia_belangeri
ENSCHOG00000008388	PRPF38A	77	97.917	ENSTTRG00000016139	PRPF38A	78	97.917	Tursiops_truncatus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSUAMG00000000625	PRPF38A	78	97.917	Ursus_americanus
ENSCHOG00000008388	PRPF38A	77	97.917	ENSUMAG00000022674	PRPF38A	78	97.917	Ursus_maritimus
ENSCHOG00000008388	PRPF38A	61	97.917	ENSVPAG00000000907	PRPF38A	78	97.917	Vicugna_pacos
ENSCHOG00000008388	PRPF38A	77	97.917	ENSVVUG00000004475	PRPF38A	78	97.917	Vulpes_vulpes
ENSCHOG00000008388	PRPF38A	77	94.792	ENSXETG00000008060	prpf38a	78	94.792	Xenopus_tropicalis