EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000008547 (Gene tree)
Gene ID: -
Gene Symbol: RNASEH1
Alias: -
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 7413 bases
Position: chrscaffold_48443:532-7944
Accession: 18466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007559	RNase_H	PF00075.24	4.5e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008567	RNASEH1-201	612	-	ENSCHOP00000007559	203 (aa)	-	UPI0001F9FE01

Gene Model

Click here to download ENSCHOG00000008547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008547	RNASEH1	97	82.741	ENSG00000171865	RNASEH1	69	82.741	Homo_sapiens
ENSCHOG00000008547	RNASEH1	86	64.368	ENSAPOG00000000412	rnaseh1	58	64.943	Acanthochromis_polyacanthus
ENSCHOG00000008547	RNASEH1	99	85.714	ENSAMEG00000018433	RNASEH1	71	85.714	Ailuropoda_melanoleuca
ENSCHOG00000008547	RNASEH1	75	69.281	ENSACIG00000014666	rnaseh1	54	66.667	Amphilophus_citrinellus
ENSCHOG00000008547	RNASEH1	86	64.943	ENSAOCG00000015210	rnaseh1	58	65.517	Amphiprion_ocellaris
ENSCHOG00000008547	RNASEH1	86	65.517	ENSAPEG00000014104	rnaseh1	58	66.092	Amphiprion_percula
ENSCHOG00000008547	RNASEH1	86	63.793	ENSATEG00000000598	rnaseh1	61	63.793	Anabas_testudineus
ENSCHOG00000008547	RNASEH1	87	71.667	ENSAPLG00000001961	RNASEH1	70	71.667	Anas_platyrhynchos
ENSCHOG00000008547	RNASEH1	100	82.353	ENSANAG00000024055	RNASEH1	71	82.353	Aotus_nancymaae
ENSCHOG00000008547	RNASEH1	74	67.550	ENSACLG00000006741	rnaseh1	54	62.353	Astatotilapia_calliptera
ENSCHOG00000008547	RNASEH1	75	62.745	ENSAMXG00000042940	rnaseh1	54	62.745	Astyanax_mexicanus
ENSCHOG00000008547	RNASEH1	100	80.882	ENSBTAG00000016235	RNASEH1	72	80.882	Bos_taurus
ENSCHOG00000008547	RNASEH1	70	46.479	WBGene00004382	rnh-1.0	72	46.479	Caenorhabditis_elegans
ENSCHOG00000008547	RNASEH1	100	79.327	ENSCJAG00000035450	RNASEH1	72	79.327	Callithrix_jacchus
ENSCHOG00000008547	RNASEH1	99	84.236	ENSCAFG00000003259	RNASEH1	71	84.236	Canis_familiaris
ENSCHOG00000008547	RNASEH1	76	92.258	ENSCAFG00020004994	RNASEH1	100	92.258	Canis_lupus_dingo
ENSCHOG00000008547	RNASEH1	100	80.882	ENSCHIG00000022264	-	71	80.882	Capra_hircus
ENSCHOG00000008547	RNASEH1	100	65.366	ENSCHIG00000022230	-	85	65.366	Capra_hircus
ENSCHOG00000008547	RNASEH1	100	85.784	ENSTSYG00000012926	RNASEH1	71	85.784	Carlito_syrichta
ENSCHOG00000008547	RNASEH1	97	81.218	ENSCAPG00000004813	RNASEH1	81	81.218	Cavia_aperea
ENSCHOG00000008547	RNASEH1	97	81.218	ENSCPOG00000022278	Rnaseh1	67	81.218	Cavia_porcellus
ENSCHOG00000008547	RNASEH1	100	80.288	ENSCCAG00000038017	RNASEH1	72	80.288	Cebus_capucinus
ENSCHOG00000008547	RNASEH1	100	74.020	ENSCATG00000016818	-	72	74.020	Cercocebus_atys
ENSCHOG00000008547	RNASEH1	100	79.902	ENSCATG00000016515	-	71	79.902	Cercocebus_atys
ENSCHOG00000008547	RNASEH1	100	79.902	ENSCLAG00000002440	RNASEH1	71	79.902	Chinchilla_lanigera
ENSCHOG00000008547	RNASEH1	100	79.902	ENSCSAG00000006943	RNASEH1	71	79.902	Chlorocebus_sabaeus
ENSCHOG00000008547	RNASEH1	84	78.363	ENSCPBG00000021620	RNASEH1	63	78.363	Chrysemys_picta_bellii
ENSCHOG00000008547	RNASEH1	80	49.383	ENSCING00000014054	-	55	49.383	Ciona_intestinalis
ENSCHOG00000008547	RNASEH1	96	82.564	ENSCANG00000037763	RNASEH1	68	82.564	Colobus_angolensis_palliatus
ENSCHOG00000008547	RNASEH1	100	76.847	ENSCGRG00001008950	Rnaseh1	71	76.847	Cricetulus_griseus_chok1gshd
ENSCHOG00000008547	RNASEH1	100	76.847	ENSCGRG00000006029	Rnaseh1	71	76.847	Cricetulus_griseus_crigri
ENSCHOG00000008547	RNASEH1	86	59.659	ENSCSEG00000005741	rnaseh1	64	57.838	Cynoglossus_semilaevis
ENSCHOG00000008547	RNASEH1	87	62.500	ENSCVAG00000018717	rnaseh1	58	62.500	Cyprinodon_variegatus
ENSCHOG00000008547	RNASEH1	97	55.610	ENSDARG00000042571	rnaseh1	74	55.610	Danio_rerio
ENSCHOG00000008547	RNASEH1	100	89.216	ENSDNOG00000016056	RNASEH1	71	89.216	Dasypus_novemcinctus
ENSCHOG00000008547	RNASEH1	100	80.392	ENSDORG00000000704	Rnaseh1	71	80.392	Dipodomys_ordii
ENSCHOG00000008547	RNASEH1	91	41.579	FBgn0023171	rnh1	60	41.579	Drosophila_melanogaster
ENSCHOG00000008547	RNASEH1	100	80.392	ENSETEG00000012674	RNASEH1	71	80.392	Echinops_telfairi
ENSCHOG00000008547	RNASEH1	95	52.850	ENSEBUG00000008898	rnaseh1	65	52.850	Eptatretus_burgeri
ENSCHOG00000008547	RNASEH1	100	86.275	ENSEASG00005022200	RNASEH1	70	86.275	Equus_asinus_asinus
ENSCHOG00000008547	RNASEH1	100	86.275	ENSECAG00000020695	RNASEH1	70	86.275	Equus_caballus
ENSCHOG00000008547	RNASEH1	87	60.773	ENSELUG00000010112	rnaseh1	61	60.773	Esox_lucius
ENSCHOG00000008547	RNASEH1	100	85.784	ENSFCAG00000025832	RNASEH1	71	85.784	Felis_catus
ENSCHOG00000008547	RNASEH1	87	72.376	ENSFALG00000002069	RNASEH1	61	72.376	Ficedula_albicollis
ENSCHOG00000008547	RNASEH1	97	79.188	ENSFDAG00000002035	RNASEH1	61	79.188	Fukomys_damarensis
ENSCHOG00000008547	RNASEH1	86	62.286	ENSGMOG00000013818	rnaseh1	62	62.286	Gadus_morhua
ENSCHOG00000008547	RNASEH1	87	70.787	ENSGALG00000016389	RNASEH1	61	70.787	Gallus_gallus
ENSCHOG00000008547	RNASEH1	81	65.060	ENSGAFG00000001776	rnaseh1	56	65.060	Gambusia_affinis
ENSCHOG00000008547	RNASEH1	87	61.364	ENSGACG00000011935	rnaseh1	59	61.364	Gasterosteus_aculeatus
ENSCHOG00000008547	RNASEH1	93	84.656	ENSGGOG00000034822	RNASEH1	66	84.656	Gorilla_gorilla
ENSCHOG00000008547	RNASEH1	74	67.550	ENSHBUG00000004666	rnaseh1	54	62.353	Haplochromis_burtoni
ENSCHOG00000008547	RNASEH1	97	79.188	ENSHGLG00000002585	Rnaseh1	64	79.188	Heterocephalus_glaber_female
ENSCHOG00000008547	RNASEH1	97	79.188	ENSHGLG00100005105	Rnaseh1	64	79.188	Heterocephalus_glaber_male
ENSCHOG00000008547	RNASEH1	84	64.327	ENSHCOG00000012329	rnaseh1	56	64.327	Hippocampus_comes
ENSCHOG00000008547	RNASEH1	75	67.974	ENSIPUG00000023060	rnaseh1	59	67.974	Ictalurus_punctatus
ENSCHOG00000008547	RNASEH1	100	80.392	ENSSTOG00000012774	RNASEH1	73	80.392	Ictidomys_tridecemlineatus
ENSCHOG00000008547	RNASEH1	94	72.251	ENSJJAG00000021481	-	66	72.251	Jaculus_jaculus
ENSCHOG00000008547	RNASEH1	80	80.368	ENSJJAG00000020238	Rnaseh1	64	80.368	Jaculus_jaculus
ENSCHOG00000008547	RNASEH1	94	63.874	ENSJJAG00000008994	-	67	63.874	Jaculus_jaculus
ENSCHOG00000008547	RNASEH1	76	66.883	ENSKMAG00000001373	rnaseh1	53	66.883	Kryptolebias_marmoratus
ENSCHOG00000008547	RNASEH1	88	58.696	ENSLBEG00000004480	rnaseh1	66	59.239	Labrus_bergylta
ENSCHOG00000008547	RNASEH1	75	72.549	ENSLACG00000007100	RNASEH1	57	60.513	Latimeria_chalumnae
ENSCHOG00000008547	RNASEH1	88	65.000	ENSLOCG00000017212	rnaseh1	63	66.286	Lepisosteus_oculatus
ENSCHOG00000008547	RNASEH1	99	83.251	ENSLAFG00000015091	RNASEH1	71	83.251	Loxodonta_africana
ENSCHOG00000008547	RNASEH1	100	72.059	ENSMFAG00000002323	-	70	72.059	Macaca_fascicularis
ENSCHOG00000008547	RNASEH1	100	79.902	ENSMFAG00000000063	-	71	79.902	Macaca_fascicularis
ENSCHOG00000008547	RNASEH1	100	73.529	ENSMMUG00000019280	-	70	73.529	Macaca_mulatta
ENSCHOG00000008547	RNASEH1	100	73.529	ENSMNEG00000029676	-	70	73.529	Macaca_nemestrina
ENSCHOG00000008547	RNASEH1	100	79.412	ENSMNEG00000040183	-	71	79.412	Macaca_nemestrina
ENSCHOG00000008547	RNASEH1	100	80.882	ENSMLEG00000039352	-	84	80.882	Mandrillus_leucophaeus
ENSCHOG00000008547	RNASEH1	100	75.490	ENSMLEG00000028662	-	70	75.490	Mandrillus_leucophaeus
ENSCHOG00000008547	RNASEH1	86	64.000	ENSMAMG00000019725	rnaseh1	62	64.000	Mastacembelus_armatus
ENSCHOG00000008547	RNASEH1	74	67.550	ENSMZEG00005013006	rnaseh1	54	62.353	Maylandia_zebra
ENSCHOG00000008547	RNASEH1	86	71.429	ENSMGAG00000013979	RNASEH1	71	71.429	Meleagris_gallopavo
ENSCHOG00000008547	RNASEH1	99	76.238	ENSMAUG00000014957	Rnaseh1	71	76.238	Mesocricetus_auratus
ENSCHOG00000008547	RNASEH1	100	84.804	ENSMICG00000033156	RNASEH1	70	84.804	Microcebus_murinus
ENSCHOG00000008547	RNASEH1	100	74.879	ENSMOCG00000015522	Rnaseh1	72	74.879	Microtus_ochrogaster
ENSCHOG00000008547	RNASEH1	86	60.920	ENSMMOG00000015902	rnaseh1	57	60.920	Mola_mola
ENSCHOG00000008547	RNASEH1	89	77.901	ENSMODG00000014491	-	63	77.901	Monodelphis_domestica
ENSCHOG00000008547	RNASEH1	85	69.942	ENSMODG00000028814	-	73	68.508	Monodelphis_domestica
ENSCHOG00000008547	RNASEH1	87	63.636	ENSMALG00000010565	rnaseh1	56	68.027	Monopterus_albus
ENSCHOG00000008547	RNASEH1	97	80.203	MGP_CAROLIEiJ_G0017660	Rnaseh1	69	80.203	Mus_caroli
ENSCHOG00000008547	RNASEH1	97	80.711	ENSMUSG00000020630	Rnaseh1	69	80.711	Mus_musculus
ENSCHOG00000008547	RNASEH1	96	78.974	MGP_PahariEiJ_G0029418	Rnaseh1	68	80.612	Mus_pahari
ENSCHOG00000008547	RNASEH1	96	80.612	MGP_SPRETEiJ_G0018502	Rnaseh1	68	80.612	Mus_spretus
ENSCHOG00000008547	RNASEH1	97	83.756	ENSMPUG00000012984	RNASEH1	95	83.756	Mustela_putorius_furo
ENSCHOG00000008547	RNASEH1	100	80.000	ENSNGAG00000015966	Rnaseh1	67	80.000	Nannospalax_galili
ENSCHOG00000008547	RNASEH1	74	68.212	ENSNBRG00000008739	rnaseh1	54	62.941	Neolamprologus_brichardi
ENSCHOG00000008547	RNASEH1	100	62.621	ENSNLEG00000015400	RNASEH1	67	62.621	Nomascus_leucogenys
ENSCHOG00000008547	RNASEH1	79	77.019	ENSNLEG00000000059	-	62	77.019	Nomascus_leucogenys
ENSCHOG00000008547	RNASEH1	96	45.128	ENSMEUG00000003610	-	68	45.128	Notamacropus_eugenii
ENSCHOG00000008547	RNASEH1	100	73.659	ENSOPRG00000005072	RNASEH1	71	73.659	Ochotona_princeps
ENSCHOG00000008547	RNASEH1	97	80.711	ENSODEG00000000235	Rnaseh1	68	80.711	Octodon_degus
ENSCHOG00000008547	RNASEH1	74	67.550	ENSONIG00000018697	rnaseh1	54	67.550	Oreochromis_niloticus
ENSCHOG00000008547	RNASEH1	100	80.882	ENSOCUG00000006117	RNASEH1	71	80.882	Oryctolagus_cuniculus
ENSCHOG00000008547	RNASEH1	74	69.536	ENSORLG00000018127	rnaseh1	64	62.500	Oryzias_latipes
ENSCHOG00000008547	RNASEH1	74	69.536	ENSORLG00020013660	rnaseh1	59	62.500	Oryzias_latipes_hni
ENSCHOG00000008547	RNASEH1	74	69.536	ENSORLG00015011338	rnaseh1	59	62.500	Oryzias_latipes_hsok
ENSCHOG00000008547	RNASEH1	99	82.843	ENSOGAG00000017176	RNASEH1	71	82.843	Otolemur_garnettii
ENSCHOG00000008547	RNASEH1	100	65.550	ENSOARG00000005386	RNASEH1	71	65.550	Ovis_aries
ENSCHOG00000008547	RNASEH1	97	82.741	ENSPPAG00000034221	RNASEH1	69	82.741	Pan_paniscus
ENSCHOG00000008547	RNASEH1	100	85.294	ENSPPRG00000015513	RNASEH1	71	85.294	Panthera_pardus
ENSCHOG00000008547	RNASEH1	100	85.294	ENSPTIG00000019034	RNASEH1	71	85.294	Panthera_tigris_altaica
ENSCHOG00000008547	RNASEH1	97	82.741	ENSPTRG00000011614	RNASEH1	69	82.741	Pan_troglodytes
ENSCHOG00000008547	RNASEH1	82	75.000	ENSPTRG00000043403	-	65	75.000	Pan_troglodytes
ENSCHOG00000008547	RNASEH1	100	79.902	ENSPANG00000000443	RNASEH1	83	79.902	Papio_anubis
ENSCHOG00000008547	RNASEH1	100	68.137	ENSPANG00000018246	-	69	68.137	Papio_anubis
ENSCHOG00000008547	RNASEH1	97	53.571	ENSPKIG00000003146	rnaseh1	73	53.571	Paramormyrops_kingsleyae
ENSCHOG00000008547	RNASEH1	86	75.568	ENSPSIG00000002937	RNASEH1	65	75.568	Pelodiscus_sinensis
ENSCHOG00000008547	RNASEH1	86	60.571	ENSPMGG00000017463	rnaseh1	64	60.571	Periophthalmus_magnuspinnatus
ENSCHOG00000008547	RNASEH1	85	83.721	ENSPEMG00000022465	-	71	75.610	Peromyscus_maniculatus_bairdii
ENSCHOG00000008547	RNASEH1	73	44.371	ENSPCIG00000026047	-	83	45.270	Phascolarctos_cinereus
ENSCHOG00000008547	RNASEH1	88	75.843	ENSPCIG00000023334	-	62	75.843	Phascolarctos_cinereus
ENSCHOG00000008547	RNASEH1	75	68.627	ENSPFOG00000002841	rnaseh1	52	68.627	Poecilia_formosa
ENSCHOG00000008547	RNASEH1	75	68.627	ENSPMEG00000016826	rnaseh1	52	68.627	Poecilia_mexicana
ENSCHOG00000008547	RNASEH1	87	63.068	ENSPREG00000012197	rnaseh1	58	63.068	Poecilia_reticulata
ENSCHOG00000008547	RNASEH1	100	65.196	ENSPPYG00000025873	RNASEH1	67	65.196	Pongo_abelii
ENSCHOG00000008547	RNASEH1	88	75.978	ENSPPYG00000008067	-	69	75.978	Pongo_abelii
ENSCHOG00000008547	RNASEH1	99	80.597	ENSPCAG00000002500	RNASEH1	70	80.597	Procavia_capensis
ENSCHOG00000008547	RNASEH1	100	74.510	ENSPCOG00000019444	RNASEH1	69	74.510	Propithecus_coquereli
ENSCHOG00000008547	RNASEH1	99	72.277	ENSPVAG00000002070	RNASEH1	71	72.277	Pteropus_vampyrus
ENSCHOG00000008547	RNASEH1	74	66.887	ENSPNYG00000001292	rnaseh1	54	61.765	Pundamilia_nyererei
ENSCHOG00000008547	RNASEH1	76	69.677	ENSPNAG00000022344	rnaseh1	55	69.677	Pygocentrus_nattereri
ENSCHOG00000008547	RNASEH1	99	78.713	ENSRNOG00000008584	Rnaseh1	71	78.713	Rattus_norvegicus
ENSCHOG00000008547	RNASEH1	100	79.902	ENSRBIG00000034222	RNASEH1	71	79.902	Rhinopithecus_bieti
ENSCHOG00000008547	RNASEH1	100	79.902	ENSRROG00000041761	RNASEH1	71	79.902	Rhinopithecus_roxellana
ENSCHOG00000008547	RNASEH1	97	81.592	ENSSBOG00000025411	RNASEH1	69	81.592	Saimiri_boliviensis_boliviensis
ENSCHOG00000008547	RNASEH1	89	79.006	ENSSHAG00000013051	RNASEH1	63	79.006	Sarcophilus_harrisii
ENSCHOG00000008547	RNASEH1	76	65.584	ENSSFOG00015002709	rnaseh1	56	64.430	Scleropages_formosus
ENSCHOG00000008547	RNASEH1	74	70.199	ENSSMAG00000007586	rnaseh1	54	67.284	Scophthalmus_maximus
ENSCHOG00000008547	RNASEH1	74	68.874	ENSSDUG00000008217	rnaseh1	61	64.205	Seriola_dumerili
ENSCHOG00000008547	RNASEH1	74	68.212	ENSSLDG00000000442	rnaseh1	66	63.636	Seriola_lalandi_dorsalis
ENSCHOG00000008547	RNASEH1	85	71.676	ENSSPUG00000006644	RNASEH1	60	71.676	Sphenodon_punctatus
ENSCHOG00000008547	RNASEH1	86	66.092	ENSSPAG00000009353	rnaseh1	57	66.667	Stegastes_partitus
ENSCHOG00000008547	RNASEH1	99	79.104	ENSSSCG00000025305	RNASEH1	70	79.104	Sus_scrofa
ENSCHOG00000008547	RNASEH1	87	72.376	ENSTGUG00000012980	RNASEH1	61	72.376	Taeniopygia_guttata
ENSCHOG00000008547	RNASEH1	87	62.147	ENSTRUG00000015774	rnaseh1	63	62.147	Takifugu_rubripes
ENSCHOG00000008547	RNASEH1	89	65.193	ENSTNIG00000010715	rnaseh1	65	65.193	Tetraodon_nigroviridis
ENSCHOG00000008547	RNASEH1	100	75.980	ENSTTRG00000001615	RNASEH1	71	75.980	Tursiops_truncatus
ENSCHOG00000008547	RNASEH1	78	89.937	ENSUAMG00000018254	RNASEH1	82	89.937	Ursus_americanus
ENSCHOG00000008547	RNASEH1	74	81.579	ENSUMAG00000003941	RNASEH1	50	81.579	Ursus_maritimus
ENSCHOG00000008547	RNASEH1	99	63.547	ENSVPAG00000011589	RNASEH1	71	63.547	Vicugna_pacos
ENSCHOG00000008547	RNASEH1	99	84.729	ENSVVUG00000008633	RNASEH1	63	84.729	Vulpes_vulpes
ENSCHOG00000008547	RNASEH1	74	68.874	ENSXETG00000001212	rnaseh1	74	56.291	Xenopus_tropicalis
ENSCHOG00000008547	RNASEH1	74	55.629	ENSXETG00000030371	-	74	55.629	Xenopus_tropicalis
ENSCHOG00000008547	RNASEH1	80	64.815	ENSXMAG00000002357	rnaseh1	55	64.815	Xiphophorus_maculatus