EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000008590 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: PRPC8|Prp8|RP13|SNRNP220|hPrp8
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 26500 bases
Position: chrGeneScaffold_6548:3-26502
Accession: 17340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007615	RRM_4	PF10598.9	1.6e-48	1	1
ENSCHOP00000007615	U5_2-snRNA_bdg	PF10597.9	2.5e-74	1	1
ENSCHOP00000007615	PRO8NT	PF08082.11	4.9e-87	1	1
ENSCHOP00000007615	U6-snRNA_bdg	PF10596.9	6e-90	1	1
ENSCHOP00000007615	PROCN	PF08083.11	7e-141	1	1
ENSCHOP00000007615	PRP8_domainIV	PF12134.8	1.6e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008628	PRPF8-201	6312	-	ENSCHOP00000007615	2104 (aa)	-	UPI0001F9FEA8

Gene Model

Click here to download ENSCHOG00000008590's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008590's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008590	PRPF8	88	99.738	ENSG00000174231	PRPF8	82	100.000	Homo_sapiens
ENSCHOG00000008590	PRPF8	88	97.333	ENSAPOG00000010079	prpf8	81	97.333	Acanthochromis_polyacanthus
ENSCHOG00000008590	PRPF8	88	99.738	ENSAMEG00000007940	PRPF8	81	99.738	Ailuropoda_melanoleuca
ENSCHOG00000008590	PRPF8	88	97.333	ENSACIG00000018280	prpf8	81	97.333	Amphilophus_citrinellus
ENSCHOG00000008590	PRPF8	88	97.333	ENSAOCG00000010725	prpf8	81	97.333	Amphiprion_ocellaris
ENSCHOG00000008590	PRPF8	88	97.333	ENSAPEG00000014397	prpf8	81	97.333	Amphiprion_percula
ENSCHOG00000008590	PRPF8	88	93.833	ENSATEG00000010062	prpf8	81	93.833	Anabas_testudineus
ENSCHOG00000008590	PRPF8	84	98.000	ENSAPLG00000010357	PRPF8	80	98.000	Anas_platyrhynchos
ENSCHOG00000008590	PRPF8	81	96.850	ENSACAG00000014784	PRPF8	90	96.850	Anolis_carolinensis
ENSCHOG00000008590	PRPF8	88	99.738	ENSANAG00000032629	PRPF8	81	99.738	Aotus_nancymaae
ENSCHOG00000008590	PRPF8	88	97.333	ENSACLG00000020858	prpf8	81	97.333	Astatotilapia_calliptera
ENSCHOG00000008590	PRPF8	88	97.333	ENSAMXG00000020291	prpf8	81	97.333	Astyanax_mexicanus
ENSCHOG00000008590	PRPF8	88	99.738	ENSBTAG00000011488	PRPF8	81	99.738	Bos_taurus
ENSCHOG00000008590	PRPF8	86	86.941	WBGene00004187	prp-8	81	86.941	Caenorhabditis_elegans
ENSCHOG00000008590	PRPF8	88	99.738	ENSCJAG00000001911	PRPF8	81	99.738	Callithrix_jacchus
ENSCHOG00000008590	PRPF8	88	99.738	ENSCAFG00000019221	PRPF8	81	99.738	Canis_familiaris
ENSCHOG00000008590	PRPF8	83	99.652	ENSCAFG00020009943	PRPF8	80	99.652	Canis_lupus_dingo
ENSCHOG00000008590	PRPF8	88	99.738	ENSCHIG00000017499	PRPF8	81	99.738	Capra_hircus
ENSCHOG00000008590	PRPF8	88	99.738	ENSTSYG00000014120	PRPF8	81	99.738	Carlito_syrichta
ENSCHOG00000008590	PRPF8	84	99.656	ENSCAPG00000009459	PRPF8	80	99.656	Cavia_aperea
ENSCHOG00000008590	PRPF8	88	99.738	ENSCPOG00000010379	PRPF8	81	99.738	Cavia_porcellus
ENSCHOG00000008590	PRPF8	88	99.738	ENSCCAG00000031983	-	81	99.738	Cebus_capucinus
ENSCHOG00000008590	PRPF8	88	99.738	ENSCATG00000038595	PRPF8	81	99.738	Cercocebus_atys
ENSCHOG00000008590	PRPF8	88	99.738	ENSCLAG00000004388	PRPF8	81	99.738	Chinchilla_lanigera
ENSCHOG00000008590	PRPF8	88	99.738	ENSCSAG00000013929	PRPF8	81	99.738	Chlorocebus_sabaeus
ENSCHOG00000008590	PRPF8	88	98.163	ENSCPBG00000020409	PRPF8	81	98.163	Chrysemys_picta_bellii
ENSCHOG00000008590	PRPF8	86	94.000	ENSCSAVG00000007825	-	85	94.000	Ciona_savignyi
ENSCHOG00000008590	PRPF8	88	99.738	ENSCANG00000043088	PRPF8	81	99.738	Colobus_angolensis_palliatus
ENSCHOG00000008590	PRPF8	61	98.913	ENSCGRG00000005129	Prpf8	77	98.913	Cricetulus_griseus_crigri
ENSCHOG00000008590	PRPF8	88	97.333	ENSCSEG00000007905	prpf8	81	97.333	Cynoglossus_semilaevis
ENSCHOG00000008590	PRPF8	88	97.333	ENSDARG00000026180	prpf8	82	97.333	Danio_rerio
ENSCHOG00000008590	PRPF8	88	99.738	ENSDNOG00000018471	PRPF8	86	99.738	Dasypus_novemcinctus
ENSCHOG00000008590	PRPF8	68	99.738	ENSDORG00000006185	Prpf8	73	99.738	Dipodomys_ordii
ENSCHOG00000008590	PRPF8	88	92.667	FBgn0033688	Prp8	79	92.667	Drosophila_melanogaster
ENSCHOG00000008590	PRPF8	87	100.000	ENSETEG00000017592	PRPF8	80	100.000	Echinops_telfairi
ENSCHOG00000008590	PRPF8	88	94.667	ENSEBUG00000006548	prpf8	80	94.667	Eptatretus_burgeri
ENSCHOG00000008590	PRPF8	88	99.738	ENSEASG00005009514	PRPF8	88	99.738	Equus_asinus_asinus
ENSCHOG00000008590	PRPF8	85	99.688	ENSECAG00000021318	PRPF8	81	99.688	Equus_caballus
ENSCHOG00000008590	PRPF8	60	100.000	ENSEEUG00000012120	-	56	100.000	Erinaceus_europaeus
ENSCHOG00000008590	PRPF8	88	97.333	ENSELUG00000007120	prpf8	83	97.333	Esox_lucius
ENSCHOG00000008590	PRPF8	88	99.738	ENSFCAG00000006297	PRPF8	81	99.738	Felis_catus
ENSCHOG00000008590	PRPF8	88	98.000	ENSFALG00000006628	PRPF8	81	98.000	Ficedula_albicollis
ENSCHOG00000008590	PRPF8	88	99.738	ENSFDAG00000004711	PRPF8	81	99.738	Fukomys_damarensis
ENSCHOG00000008590	PRPF8	88	97.333	ENSFHEG00000021084	prpf8	81	97.333	Fundulus_heteroclitus
ENSCHOG00000008590	PRPF8	87	94.215	ENSGMOG00000002028	prpf8	80	93.465	Gadus_morhua
ENSCHOG00000008590	PRPF8	88	98.000	ENSGALG00000002943	PRPF8	81	98.000	Gallus_gallus
ENSCHOG00000008590	PRPF8	87	97.333	ENSGAFG00000010337	prpf8	81	97.333	Gambusia_affinis
ENSCHOG00000008590	PRPF8	88	97.333	ENSGACG00000008504	prpf8	81	97.333	Gasterosteus_aculeatus
ENSCHOG00000008590	PRPF8	88	98.163	ENSGAGG00000008350	PRPF8	81	98.163	Gopherus_agassizii
ENSCHOG00000008590	PRPF8	88	99.738	ENSGGOG00000005516	PRPF8	81	99.738	Gorilla_gorilla
ENSCHOG00000008590	PRPF8	88	97.333	ENSHBUG00000016192	prpf8	81	97.333	Haplochromis_burtoni
ENSCHOG00000008590	PRPF8	88	99.738	ENSHGLG00000012029	PRPF8	81	99.738	Heterocephalus_glaber_female
ENSCHOG00000008590	PRPF8	88	99.738	ENSHGLG00100016494	PRPF8	81	99.738	Heterocephalus_glaber_male
ENSCHOG00000008590	PRPF8	88	97.333	ENSHCOG00000016414	prpf8	81	97.333	Hippocampus_comes
ENSCHOG00000008590	PRPF8	88	97.333	ENSIPUG00000023230	prpf8	81	97.333	Ictalurus_punctatus
ENSCHOG00000008590	PRPF8	88	99.738	ENSSTOG00000005128	PRPF8	81	99.738	Ictidomys_tridecemlineatus
ENSCHOG00000008590	PRPF8	88	99.738	ENSJJAG00000021159	Prpf8	81	99.738	Jaculus_jaculus
ENSCHOG00000008590	PRPF8	87	97.333	ENSKMAG00000016118	prpf8	80	97.333	Kryptolebias_marmoratus
ENSCHOG00000008590	PRPF8	88	97.333	ENSLBEG00000026903	prpf8	81	97.333	Labrus_bergylta
ENSCHOG00000008590	PRPF8	88	96.711	ENSLACG00000010479	PRPF8	86	96.711	Latimeria_chalumnae
ENSCHOG00000008590	PRPF8	88	97.333	ENSLOCG00000005409	prpf8	81	97.333	Lepisosteus_oculatus
ENSCHOG00000008590	PRPF8	88	99.738	ENSLAFG00000015445	PRPF8	81	99.738	Loxodonta_africana
ENSCHOG00000008590	PRPF8	88	99.738	ENSMFAG00000039995	PRPF8	81	99.738	Macaca_fascicularis
ENSCHOG00000008590	PRPF8	88	99.738	ENSMMUG00000004820	PRPF8	81	99.738	Macaca_mulatta
ENSCHOG00000008590	PRPF8	88	99.738	ENSMNEG00000035713	PRPF8	81	99.738	Macaca_nemestrina
ENSCHOG00000008590	PRPF8	88	99.738	ENSMLEG00000037937	PRPF8	81	99.738	Mandrillus_leucophaeus
ENSCHOG00000008590	PRPF8	88	97.333	ENSMAMG00000008919	prpf8	81	97.333	Mastacembelus_armatus
ENSCHOG00000008590	PRPF8	88	97.333	ENSMZEG00005015073	prpf8	81	97.333	Maylandia_zebra
ENSCHOG00000008590	PRPF8	88	98.000	ENSMGAG00000004769	PRPF8	81	98.000	Meleagris_gallopavo
ENSCHOG00000008590	PRPF8	88	99.738	ENSMICG00000010320	PRPF8	81	99.738	Microcebus_murinus
ENSCHOG00000008590	PRPF8	88	99.738	ENSMOCG00000016838	Prpf8	81	99.738	Microtus_ochrogaster
ENSCHOG00000008590	PRPF8	88	97.333	ENSMMOG00000011887	prpf8	81	97.333	Mola_mola
ENSCHOG00000008590	PRPF8	88	99.475	ENSMODG00000010480	PRPF8	81	99.475	Monodelphis_domestica
ENSCHOG00000008590	PRPF8	85	96.667	ENSMALG00000003558	prpf8	80	96.667	Monopterus_albus
ENSCHOG00000008590	PRPF8	88	99.738	MGP_CAROLIEiJ_G0016740	Prpf8	81	99.738	Mus_caroli
ENSCHOG00000008590	PRPF8	88	99.738	ENSMUSG00000020850	Prpf8	81	99.738	Mus_musculus
ENSCHOG00000008590	PRPF8	88	99.475	MGP_PahariEiJ_G0017877	Prpf8	81	99.475	Mus_pahari
ENSCHOG00000008590	PRPF8	88	99.738	MGP_SPRETEiJ_G0017583	Prpf8	81	99.738	Mus_spretus
ENSCHOG00000008590	PRPF8	88	99.738	ENSMPUG00000013227	PRPF8	81	99.738	Mustela_putorius_furo
ENSCHOG00000008590	PRPF8	88	99.738	ENSMLUG00000002666	PRPF8	81	99.738	Myotis_lucifugus
ENSCHOG00000008590	PRPF8	88	99.738	ENSNGAG00000005305	Prpf8	81	99.738	Nannospalax_galili
ENSCHOG00000008590	PRPF8	88	97.333	ENSNBRG00000013127	prpf8	81	97.333	Neolamprologus_brichardi
ENSCHOG00000008590	PRPF8	85	98.000	ENSNLEG00000000897	PRPF8	79	98.000	Nomascus_leucogenys
ENSCHOG00000008590	PRPF8	86	99.712	ENSMEUG00000015999	PRPF8	81	99.712	Notamacropus_eugenii
ENSCHOG00000008590	PRPF8	88	98.000	ENSOPRG00000003102	PRPF8	81	98.000	Ochotona_princeps
ENSCHOG00000008590	PRPF8	88	99.738	ENSODEG00000008468	PRPF8	81	99.738	Octodon_degus
ENSCHOG00000008590	PRPF8	88	97.333	ENSONIG00000008153	prpf8	81	97.333	Oreochromis_niloticus
ENSCHOG00000008590	PRPF8	68	99.558	ENSOANG00000004250	PRPF8	75	99.558	Ornithorhynchus_anatinus
ENSCHOG00000008590	PRPF8	88	99.738	ENSOCUG00000000081	PRPF8	81	99.738	Oryctolagus_cuniculus
ENSCHOG00000008590	PRPF8	87	97.333	ENSORLG00000008036	prpf8	81	97.333	Oryzias_latipes
ENSCHOG00000008590	PRPF8	87	97.333	ENSORLG00020021070	prpf8	80	97.333	Oryzias_latipes_hni
ENSCHOG00000008590	PRPF8	87	97.333	ENSORLG00015002340	prpf8	80	97.333	Oryzias_latipes_hsok
ENSCHOG00000008590	PRPF8	87	95.543	ENSOMEG00000016866	prpf8	80	93.612	Oryzias_melastigma
ENSCHOG00000008590	PRPF8	88	99.738	ENSOARG00000013312	PRPF8	81	99.738	Ovis_aries
ENSCHOG00000008590	PRPF8	88	99.738	ENSPPAG00000042753	PRPF8	81	99.738	Pan_paniscus
ENSCHOG00000008590	PRPF8	88	99.738	ENSPPRG00000008746	PRPF8	81	99.738	Panthera_pardus
ENSCHOG00000008590	PRPF8	88	99.738	ENSPTIG00000019200	PRPF8	81	99.738	Panthera_tigris_altaica
ENSCHOG00000008590	PRPF8	88	99.738	ENSPTRG00000039576	PRPF8	81	99.738	Pan_troglodytes
ENSCHOG00000008590	PRPF8	88	98.000	ENSPANG00000024607	PRPF8	81	98.000	Papio_anubis
ENSCHOG00000008590	PRPF8	88	97.333	ENSPKIG00000011201	prpf8	81	97.333	Paramormyrops_kingsleyae
ENSCHOG00000008590	PRPF8	88	98.163	ENSPSIG00000013393	PRPF8	81	98.163	Pelodiscus_sinensis
ENSCHOG00000008590	PRPF8	88	99.738	ENSPEMG00000021699	Prpf8	81	99.738	Peromyscus_maniculatus_bairdii
ENSCHOG00000008590	PRPF8	84	95.333	ENSPMAG00000005438	prpf8	80	95.333	Petromyzon_marinus
ENSCHOG00000008590	PRPF8	88	99.475	ENSPCIG00000022603	PRPF8	81	99.475	Phascolarctos_cinereus
ENSCHOG00000008590	PRPF8	87	97.333	ENSPFOG00000007005	prpf8	81	97.333	Poecilia_formosa
ENSCHOG00000008590	PRPF8	88	97.333	ENSPLAG00000020777	prpf8	81	97.333	Poecilia_latipinna
ENSCHOG00000008590	PRPF8	88	97.333	ENSPMEG00000004051	prpf8	81	97.333	Poecilia_mexicana
ENSCHOG00000008590	PRPF8	88	97.333	ENSPREG00000021902	prpf8	81	97.333	Poecilia_reticulata
ENSCHOG00000008590	PRPF8	88	99.738	ENSPPYG00000007777	PRPF8	81	99.738	Pongo_abelii
ENSCHOG00000008590	PRPF8	77	99.738	ENSPCAG00000008938	PRPF8	71	99.738	Procavia_capensis
ENSCHOG00000008590	PRPF8	88	99.738	ENSPCOG00000015182	PRPF8	81	99.738	Propithecus_coquereli
ENSCHOG00000008590	PRPF8	84	100.000	ENSPVAG00000002134	PRPF8	77	100.000	Pteropus_vampyrus
ENSCHOG00000008590	PRPF8	88	97.333	ENSPNYG00000016356	prpf8	81	97.333	Pundamilia_nyererei
ENSCHOG00000008590	PRPF8	88	97.333	ENSPNAG00000009247	prpf8	81	97.333	Pygocentrus_nattereri
ENSCHOG00000008590	PRPF8	88	99.738	ENSRNOG00000003495	Prpf8	81	99.738	Rattus_norvegicus
ENSCHOG00000008590	PRPF8	88	99.738	ENSRBIG00000031219	PRPF8	81	99.738	Rhinopithecus_bieti
ENSCHOG00000008590	PRPF8	88	99.738	ENSRROG00000038014	PRPF8	81	99.738	Rhinopithecus_roxellana
ENSCHOG00000008590	PRPF8	86	65.859	YHR165C	PRP8	76	65.859	Saccharomyces_cerevisiae
ENSCHOG00000008590	PRPF8	88	99.738	ENSSBOG00000029717	PRPF8	81	99.738	Saimiri_boliviensis_boliviensis
ENSCHOG00000008590	PRPF8	88	99.475	ENSSHAG00000006167	PRPF8	81	99.475	Sarcophilus_harrisii
ENSCHOG00000008590	PRPF8	88	97.333	ENSSFOG00015013905	prpf8	81	97.333	Scleropages_formosus
ENSCHOG00000008590	PRPF8	88	97.333	ENSSMAG00000017736	prpf8	81	97.333	Scophthalmus_maximus
ENSCHOG00000008590	PRPF8	88	97.333	ENSSDUG00000003029	prpf8	81	97.333	Seriola_dumerili
ENSCHOG00000008590	PRPF8	62	97.333	ENSSLDG00000017096	prpf8	84	97.333	Seriola_lalandi_dorsalis
ENSCHOG00000008590	PRPF8	73	100.000	ENSSARG00000002892	PRPF8	67	100.000	Sorex_araneus
ENSCHOG00000008590	PRPF8	88	98.000	ENSSPUG00000007463	PRPF8	81	98.000	Sphenodon_punctatus
ENSCHOG00000008590	PRPF8	88	97.333	ENSSPAG00000015639	prpf8	81	97.333	Stegastes_partitus
ENSCHOG00000008590	PRPF8	88	99.738	ENSSSCG00000017817	PRPF8	81	99.738	Sus_scrofa
ENSCHOG00000008590	PRPF8	88	98.000	ENSTGUG00000005648	-	81	98.000	Taeniopygia_guttata
ENSCHOG00000008590	PRPF8	88	97.333	ENSTRUG00000015906	prpf8	81	97.333	Takifugu_rubripes
ENSCHOG00000008590	PRPF8	83	97.333	ENSTNIG00000003460	prpf8	81	97.333	Tetraodon_nigroviridis
ENSCHOG00000008590	PRPF8	79	94.090	ENSTBEG00000006431	PRPF8	73	94.090	Tupaia_belangeri
ENSCHOG00000008590	PRPF8	88	99.738	ENSTTRG00000006869	PRPF8	81	99.738	Tursiops_truncatus
ENSCHOG00000008590	PRPF8	53	99.738	ENSUAMG00000015644	-	82	99.738	Ursus_americanus
ENSCHOG00000008590	PRPF8	88	99.738	ENSUMAG00000009385	PRPF8	81	99.738	Ursus_maritimus
ENSCHOG00000008590	PRPF8	61	98.000	ENSVPAG00000006063	-	56	98.000	Vicugna_pacos
ENSCHOG00000008590	PRPF8	88	99.738	ENSVVUG00000021695	PRPF8	80	99.738	Vulpes_vulpes
ENSCHOG00000008590	PRPF8	88	98.000	ENSXETG00000022259	prpf8	81	98.000	Xenopus_tropicalis
ENSCHOG00000008590	PRPF8	88	97.333	ENSXCOG00000012775	prpf8	81	97.333	Xiphophorus_couchianus
ENSCHOG00000008590	PRPF8	88	97.333	ENSXMAG00000008505	prpf8	81	97.333	Xiphophorus_maculatus