EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000008660 (Gene tree)
Gene ID: -
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 56152 bases
Position: chrGeneScaffold_4896:173-56324
Accession: 18585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007666	RRM_1	PF00076.22	5.2e-17	1	2
ENSCHOP00000007666	RRM_1	PF00076.22	5.2e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008689	MSI2-201	840	-	ENSCHOP00000007666	280 (aa)	-	UPI0001F9FFBA

Gene Model

Click here to download ENSCHOG00000008660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000008660	MSI2	56	36.364	ENSCHOG00000010831	-	58	34.426
ENSCHOG00000008660	MSI2	57	32.911	ENSCHOG00000013832	HNRNPA2B1	51	32.911
ENSCHOG00000008660	MSI2	55	35.897	ENSCHOG00000009204	-	68	34.054
ENSCHOG00000008660	MSI2	56	36.601	ENSCHOG00000000045	HNRNPD	71	36.416
ENSCHOG00000008660	MSI2	56	33.766	ENSCHOG00000003275	-	58	32.418
ENSCHOG00000008660	MSI2	57	34.839	ENSCHOG00000002938	-	61	34.839
ENSCHOG00000008660	MSI2	57	36.129	ENSCHOG00000000160	-	57	36.129

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008660	MSI2	83	100.000	ENSG00000153944	MSI2	76	100.000	Homo_sapiens
ENSCHOG00000008660	MSI2	83	86.275	ENSAPOG00000001658	msi2a	71	88.000	Acanthochromis_polyacanthus
ENSCHOG00000008660	MSI2	83	100.000	ENSAMEG00000002697	MSI2	76	100.000	Ailuropoda_melanoleuca
ENSCHOG00000008660	MSI2	83	86.275	ENSACIG00000009475	msi2a	61	88.000	Amphilophus_citrinellus
ENSCHOG00000008660	MSI2	83	86.275	ENSAPEG00000007706	msi2a	71	88.000	Amphiprion_percula
ENSCHOG00000008660	MSI2	83	86.275	ENSATEG00000010498	msi2a	71	88.000	Anabas_testudineus
ENSCHOG00000008660	MSI2	95	64.151	ENSATEG00000003301	-	95	64.151	Anabas_testudineus
ENSCHOG00000008660	MSI2	74	96.078	ENSACAG00000005452	MSI2	52	96.078	Anolis_carolinensis
ENSCHOG00000008660	MSI2	100	70.000	ENSANAG00000037827	MSI2	90	70.000	Aotus_nancymaae
ENSCHOG00000008660	MSI2	83	86.275	ENSACLG00000007752	msi2a	71	88.000	Astatotilapia_calliptera
ENSCHOG00000008660	MSI2	83	90.196	ENSAMXG00000032796	msi2a	90	67.616	Astyanax_mexicanus
ENSCHOG00000008660	MSI2	83	90.196	ENSAMXG00000010474	msi2b	93	67.857	Astyanax_mexicanus
ENSCHOG00000008660	MSI2	83	98.039	ENSBTAG00000004406	MSI2	74	98.039	Bos_taurus
ENSCHOG00000008660	MSI2	64	57.595	WBGene00003423	msi-1	54	57.595	Caenorhabditis_elegans
ENSCHOG00000008660	MSI2	100	70.000	ENSCJAG00000013998	MSI2	90	70.000	Callithrix_jacchus
ENSCHOG00000008660	MSI2	83	100.000	ENSCAFG00020025620	MSI2	59	100.000	Canis_lupus_dingo
ENSCHOG00000008660	MSI2	100	69.643	ENSCHIG00000016580	MSI2	90	69.643	Capra_hircus
ENSCHOG00000008660	MSI2	96	63.941	ENSCPOG00000034042	MSI2	95	63.941	Cavia_porcellus
ENSCHOG00000008660	MSI2	100	70.000	ENSCCAG00000033927	MSI2	90	70.000	Cebus_capucinus
ENSCHOG00000008660	MSI2	100	70.000	ENSCATG00000040879	MSI2	90	70.000	Cercocebus_atys
ENSCHOG00000008660	MSI2	83	100.000	ENSCLAG00000014325	MSI2	71	100.000	Chinchilla_lanigera
ENSCHOG00000008660	MSI2	100	70.000	ENSCSAG00000005633	MSI2	90	70.000	Chlorocebus_sabaeus
ENSCHOG00000008660	MSI2	74	98.039	ENSCPBG00000009942	MSI2	66	98.039	Chrysemys_picta_bellii
ENSCHOG00000008660	MSI2	64	53.927	ENSCSAVG00000010397	-	62	53.927	Ciona_savignyi
ENSCHOG00000008660	MSI2	83	100.000	ENSCANG00000036414	MSI2	76	100.000	Colobus_angolensis_palliatus
ENSCHOG00000008660	MSI2	100	69.751	ENSCGRG00001013330	Msi2	90	69.751	Cricetulus_griseus_chok1gshd
ENSCHOG00000008660	MSI2	83	98.077	ENSCGRG00000003141	Msi2	77	98.077	Cricetulus_griseus_crigri
ENSCHOG00000008660	MSI2	55	74.000	ENSCSEG00000013549	msi2a	64	74.000	Cynoglossus_semilaevis
ENSCHOG00000008660	MSI2	100	63.571	ENSCSEG00000003266	-	86	63.571	Cynoglossus_semilaevis
ENSCHOG00000008660	MSI2	83	84.314	ENSCVAG00000017075	msi2a	92	65.468	Cyprinodon_variegatus
ENSCHOG00000008660	MSI2	83	88.235	ENSDARG00000033901	msi2a	64	88.235	Danio_rerio
ENSCHOG00000008660	MSI2	83	88.235	ENSDARG00000032614	msi2b	98	79.121	Danio_rerio
ENSCHOG00000008660	MSI2	98	69.455	ENSDNOG00000014501	MSI2	95	69.455	Dasypus_novemcinctus
ENSCHOG00000008660	MSI2	58	71.166	ENSDORG00000005394	Msi2	71	71.166	Dipodomys_ordii
ENSCHOG00000008660	MSI2	55	80.000	ENSDORG00000028440	-	100	80.000	Dipodomys_ordii
ENSCHOG00000008660	MSI2	65	59.563	FBgn0260943	Rbp6	70	62.281	Drosophila_melanogaster
ENSCHOG00000008660	MSI2	80	69.399	ENSEBUG00000006732	msi2a	62	69.399	Eptatretus_burgeri
ENSCHOG00000008660	MSI2	83	100.000	ENSEASG00005002965	MSI2	69	100.000	Equus_asinus_asinus
ENSCHOG00000008660	MSI2	83	100.000	ENSECAG00000011435	MSI2	70	100.000	Equus_caballus
ENSCHOG00000008660	MSI2	90	52.174	ENSEEUG00000007810	MSI2	100	52.174	Erinaceus_europaeus
ENSCHOG00000008660	MSI2	83	88.235	ENSELUG00000001361	msi2b	69	88.235	Esox_lucius
ENSCHOG00000008660	MSI2	80	86.047	ENSELUG00000011747	msi2a	89	66.308	Esox_lucius
ENSCHOG00000008660	MSI2	100	70.000	ENSFCAG00000041686	MSI2	75	89.744	Felis_catus
ENSCHOG00000008660	MSI2	83	100.000	ENSFDAG00000016118	MSI2	76	100.000	Fukomys_damarensis
ENSCHOG00000008660	MSI2	83	84.314	ENSFHEG00000000084	msi2a	71	86.000	Fundulus_heteroclitus
ENSCHOG00000008660	MSI2	53	68.116	ENSGMOG00000007596	-	80	68.116	Gadus_morhua
ENSCHOG00000008660	MSI2	83	96.078	ENSGALG00000005567	MSI2	71	96.078	Gallus_gallus
ENSCHOG00000008660	MSI2	99	57.394	ENSGAFG00000006974	msi2a	92	57.597	Gambusia_affinis
ENSCHOG00000008660	MSI2	81	98.039	ENSGAGG00000016542	MSI2	72	98.039	Gopherus_agassizii
ENSCHOG00000008660	MSI2	83	100.000	ENSGGOG00000013182	MSI2	76	100.000	Gorilla_gorilla
ENSCHOG00000008660	MSI2	83	86.275	ENSHBUG00000020800	msi2a	71	88.000	Haplochromis_burtoni
ENSCHOG00000008660	MSI2	83	100.000	ENSHGLG00000012444	MSI2	64	100.000	Heterocephalus_glaber_female
ENSCHOG00000008660	MSI2	55	80.000	ENSHGLG00100004028	-	86	80.000	Heterocephalus_glaber_male
ENSCHOG00000008660	MSI2	82	70.879	ENSHCOG00000017241	-	57	70.879	Hippocampus_comes
ENSCHOG00000008660	MSI2	83	82.000	ENSHCOG00000000266	msi2a	70	82.000	Hippocampus_comes
ENSCHOG00000008660	MSI2	83	88.235	ENSIPUG00000003732	msi2b	89	63.571	Ictalurus_punctatus
ENSCHOG00000008660	MSI2	83	88.235	ENSIPUG00000021097	msi2a	89	66.786	Ictalurus_punctatus
ENSCHOG00000008660	MSI2	96	63.941	ENSSTOG00000007884	MSI2	95	63.941	Ictidomys_tridecemlineatus
ENSCHOG00000008660	MSI2	55	80.000	ENSJJAG00000009467	-	100	80.000	Jaculus_jaculus
ENSCHOG00000008660	MSI2	83	84.314	ENSKMAG00000009494	msi2a	90	65.000	Kryptolebias_marmoratus
ENSCHOG00000008660	MSI2	83	86.275	ENSLBEG00000007061	msi2a	89	65.827	Labrus_bergylta
ENSCHOG00000008660	MSI2	78	70.659	ENSLBEG00000026223	-	64	70.659	Labrus_bergylta
ENSCHOG00000008660	MSI2	55	69.565	ENSLACG00000016798	MSI2	75	87.179	Latimeria_chalumnae
ENSCHOG00000008660	MSI2	83	92.157	ENSLOCG00000004675	msi2b	64	92.157	Lepisosteus_oculatus
ENSCHOG00000008660	MSI2	83	100.000	ENSMFAG00000003775	MSI2	76	100.000	Macaca_fascicularis
ENSCHOG00000008660	MSI2	83	100.000	ENSMMUG00000002069	MSI2	76	100.000	Macaca_mulatta
ENSCHOG00000008660	MSI2	100	70.000	ENSMNEG00000045275	MSI2	90	70.000	Macaca_nemestrina
ENSCHOG00000008660	MSI2	83	100.000	ENSMLEG00000033888	MSI2	76	100.000	Mandrillus_leucophaeus
ENSCHOG00000008660	MSI2	83	86.275	ENSMAMG00000002488	-	69	86.275	Mastacembelus_armatus
ENSCHOG00000008660	MSI2	83	86.275	ENSMAMG00000010503	msi2a	89	65.714	Mastacembelus_armatus
ENSCHOG00000008660	MSI2	83	86.275	ENSMZEG00005007676	msi2a	89	65.591	Maylandia_zebra
ENSCHOG00000008660	MSI2	83	98.077	ENSMAUG00000003862	Msi2	71	98.077	Mesocricetus_auratus
ENSCHOG00000008660	MSI2	75	95.833	ENSMICG00000032913	-	69	95.833	Microcebus_murinus
ENSCHOG00000008660	MSI2	100	70.000	ENSMICG00000013598	-	90	70.000	Microcebus_murinus
ENSCHOG00000008660	MSI2	83	100.000	ENSMOCG00000005820	Msi2	71	100.000	Microtus_ochrogaster
ENSCHOG00000008660	MSI2	83	82.000	ENSMMOG00000008348	msi2a	90	64.516	Mola_mola
ENSCHOG00000008660	MSI2	83	86.275	ENSMALG00000000071	msi2a	71	88.000	Monopterus_albus
ENSCHOG00000008660	MSI2	83	100.000	MGP_CAROLIEiJ_G0016948	Msi2	100	80.000	Mus_caroli
ENSCHOG00000008660	MSI2	83	100.000	ENSMUSG00000069769	Msi2	100	80.000	Mus_musculus
ENSCHOG00000008660	MSI2	83	100.000	MGP_PahariEiJ_G0018079	Msi2	100	80.000	Mus_pahari
ENSCHOG00000008660	MSI2	83	100.000	MGP_SPRETEiJ_G0017795	Msi2	100	80.000	Mus_spretus
ENSCHOG00000008660	MSI2	100	70.000	ENSMPUG00000015377	MSI2	93	70.000	Mustela_putorius_furo
ENSCHOG00000008660	MSI2	100	70.000	ENSMLUG00000007865	MSI2	93	70.000	Myotis_lucifugus
ENSCHOG00000008660	MSI2	83	100.000	ENSNGAG00000017807	Msi2	71	100.000	Nannospalax_galili
ENSCHOG00000008660	MSI2	83	86.275	ENSNBRG00000014596	msi2a	89	65.468	Neolamprologus_brichardi
ENSCHOG00000008660	MSI2	83	100.000	ENSNLEG00000008059	MSI2	75	100.000	Nomascus_leucogenys
ENSCHOG00000008660	MSI2	83	100.000	ENSODEG00000011974	MSI2	71	100.000	Octodon_degus
ENSCHOG00000008660	MSI2	55	78.000	ENSONIG00000001972	msi2a	63	78.000	Oreochromis_niloticus
ENSCHOG00000008660	MSI2	83	90.909	ENSOANG00000005667	MSI2	60	90.909	Ornithorhynchus_anatinus
ENSCHOG00000008660	MSI2	100	70.000	ENSOCUG00000010440	MSI2	93	70.000	Oryctolagus_cuniculus
ENSCHOG00000008660	MSI2	83	86.275	ENSORLG00000009671	msi2a	90	65.827	Oryzias_latipes
ENSCHOG00000008660	MSI2	83	86.275	ENSORLG00020021556	msi2a	72	88.000	Oryzias_latipes_hni
ENSCHOG00000008660	MSI2	83	86.275	ENSORLG00015004592	msi2a	90	65.827	Oryzias_latipes_hsok
ENSCHOG00000008660	MSI2	83	86.275	ENSOMEG00000000146	msi2a	91	65.950	Oryzias_melastigma
ENSCHOG00000008660	MSI2	100	68.571	ENSOGAG00000005621	MSI2	95	69.643	Otolemur_garnettii
ENSCHOG00000008660	MSI2	83	100.000	ENSPPAG00000037697	MSI2	76	100.000	Pan_paniscus
ENSCHOG00000008660	MSI2	100	70.000	ENSPPRG00000001848	MSI2	90	70.000	Panthera_pardus
ENSCHOG00000008660	MSI2	83	100.000	ENSPTIG00000021678	MSI2	72	100.000	Panthera_tigris_altaica
ENSCHOG00000008660	MSI2	65	67.582	ENSPTIG00000021873	-	70	67.582	Panthera_tigris_altaica
ENSCHOG00000008660	MSI2	83	100.000	ENSPTRG00000009437	MSI2	76	100.000	Pan_troglodytes
ENSCHOG00000008660	MSI2	100	70.000	ENSPANG00000022319	MSI2	90	70.000	Papio_anubis
ENSCHOG00000008660	MSI2	83	84.314	ENSPKIG00000007038	-	67	84.314	Paramormyrops_kingsleyae
ENSCHOG00000008660	MSI2	83	98.039	ENSPSIG00000008618	MSI2	61	98.039	Pelodiscus_sinensis
ENSCHOG00000008660	MSI2	99	65.233	ENSPMGG00000005888	msi2a	89	65.468	Periophthalmus_magnuspinnatus
ENSCHOG00000008660	MSI2	55	80.000	ENSPEMG00000021793	-	100	80.000	Peromyscus_maniculatus_bairdii
ENSCHOG00000008660	MSI2	83	96.078	ENSPCIG00000006063	MSI2	70	96.078	Phascolarctos_cinereus
ENSCHOG00000008660	MSI2	54	67.143	ENSPFOG00000019337	MSI2	74	67.143	Poecilia_formosa
ENSCHOG00000008660	MSI2	55	78.000	ENSPLAG00000000436	msi2a	61	78.000	Poecilia_latipinna
ENSCHOG00000008660	MSI2	83	84.314	ENSPREG00000000881	msi2a	88	65.233	Poecilia_reticulata
ENSCHOG00000008660	MSI2	80	68.000	ENSPPYG00000008244	-	94	68.000	Pongo_abelii
ENSCHOG00000008660	MSI2	50	100.000	ENSPCAG00000010552	MSI2	59	100.000	Procavia_capensis
ENSCHOG00000008660	MSI2	55	80.000	ENSPCOG00000019195	-	82	80.000	Propithecus_coquereli
ENSCHOG00000008660	MSI2	100	78.929	ENSPVAG00000017053	MSI2	96	78.929	Pteropus_vampyrus
ENSCHOG00000008660	MSI2	83	86.275	ENSPNYG00000018393	msi2a	89	65.591	Pundamilia_nyererei
ENSCHOG00000008660	MSI2	83	88.235	ENSPNAG00000000844	msi2b	89	67.143	Pygocentrus_nattereri
ENSCHOG00000008660	MSI2	83	90.196	ENSPNAG00000014957	msi2a	90	67.616	Pygocentrus_nattereri
ENSCHOG00000008660	MSI2	95	68.302	ENSRNOG00000025338	Msi2	95	68.302	Rattus_norvegicus
ENSCHOG00000008660	MSI2	55	80.000	ENSRROG00000034421	-	92	80.000	Rhinopithecus_roxellana
ENSCHOG00000008660	MSI2	83	100.000	ENSSBOG00000026425	MSI2	76	100.000	Saimiri_boliviensis_boliviensis
ENSCHOG00000008660	MSI2	83	96.078	ENSSHAG00000008672	MSI2	76	96.078	Sarcophilus_harrisii
ENSCHOG00000008660	MSI2	99	62.366	ENSSFOG00015021687	-	93	62.366	Scleropages_formosus
ENSCHOG00000008660	MSI2	83	86.275	ENSSMAG00000018484	msi2a	71	88.000	Scophthalmus_maximus
ENSCHOG00000008660	MSI2	83	88.235	ENSSDUG00000021968	-	75	77.000	Seriola_dumerili
ENSCHOG00000008660	MSI2	83	86.275	ENSSDUG00000014507	msi2a	71	88.000	Seriola_dumerili
ENSCHOG00000008660	MSI2	83	86.275	ENSSLDG00000017172	msi2a	89	65.827	Seriola_lalandi_dorsalis
ENSCHOG00000008660	MSI2	55	79.000	ENSSPUG00000000913	-	67	79.000	Sphenodon_punctatus
ENSCHOG00000008660	MSI2	83	86.275	ENSSPAG00000017793	msi2a	89	65.714	Stegastes_partitus
ENSCHOG00000008660	MSI2	83	100.000	ENSSSCG00000038505	MSI2	80	100.000	Sus_scrofa
ENSCHOG00000008660	MSI2	83	84.314	ENSTRUG00000021248	msi2a	83	65.591	Takifugu_rubripes
ENSCHOG00000008660	MSI2	63	84.746	ENSTBEG00000001241	MSI2	54	84.746	Tupaia_belangeri
ENSCHOG00000008660	MSI2	80	81.333	ENSTTRG00000002189	MSI2	95	81.333	Tursiops_truncatus
ENSCHOG00000008660	MSI2	83	100.000	ENSUAMG00000000700	MSI2	83	100.000	Ursus_americanus
ENSCHOG00000008660	MSI2	95	68.302	ENSUMAG00000000505	MSI2	95	68.302	Ursus_maritimus
ENSCHOG00000008660	MSI2	65	65.385	ENSVPAG00000006837	-	62	65.385	Vicugna_pacos
ENSCHOG00000008660	MSI2	83	100.000	ENSVVUG00000011783	MSI2	71	100.000	Vulpes_vulpes
ENSCHOG00000008660	MSI2	83	86.000	ENSXCOG00000006113	msi2a	62	86.000	Xiphophorus_couchianus
ENSCHOG00000008660	MSI2	83	84.314	ENSXMAG00000000608	msi2a	92	65.468	Xiphophorus_maculatus