EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000008814 (Gene tree)
Gene ID: -
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 40699 bases
Position: chrGeneScaffold_3975:13546-54244
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007815	ResIII	PF04851.15	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008853	SBNO1-201	4179	-	ENSCHOP00000007815	1392 (aa)	-	UPI0001F9FC4F

Gene Model

Click here to download ENSCHOG00000008814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008814's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008814	SBNO1	96	94.514	ENSG00000139697	SBNO1	96	94.514	Homo_sapiens
ENSCHOG00000008814	SBNO1	78	82.121	ENSAPOG00000003196	sbno1	93	82.244	Acanthochromis_polyacanthus
ENSCHOG00000008814	SBNO1	96	94.343	ENSAMEG00000015151	SBNO1	96	94.343	Ailuropoda_melanoleuca
ENSCHOG00000008814	SBNO1	96	72.306	ENSACIG00000008088	sbno1	94	72.185	Amphilophus_citrinellus
ENSCHOG00000008814	SBNO1	99	68.987	ENSAOCG00000014859	sbno1	94	72.991	Amphiprion_ocellaris
ENSCHOG00000008814	SBNO1	99	68.987	ENSAPEG00000006069	sbno1	94	72.991	Amphiprion_percula
ENSCHOG00000008814	SBNO1	96	73.290	ENSATEG00000006667	sbno1	96	73.477	Anabas_testudineus
ENSCHOG00000008814	SBNO1	96	88.739	ENSAPLG00000015674	SBNO1	96	88.750	Anas_platyrhynchos
ENSCHOG00000008814	SBNO1	96	83.112	ENSACAG00000015441	SBNO1	84	83.112	Anolis_carolinensis
ENSCHOG00000008814	SBNO1	91	99.500	ENSANAG00000029958	-	95	98.565	Aotus_nancymaae
ENSCHOG00000008814	SBNO1	96	72.684	ENSACLG00000024913	sbno1	95	72.624	Astatotilapia_calliptera
ENSCHOG00000008814	SBNO1	96	75.878	ENSAMXG00000019473	sbno1	96	76.353	Astyanax_mexicanus
ENSCHOG00000008814	SBNO1	96	94.904	ENSBTAG00000020505	SBNO1	96	94.904	Bos_taurus
ENSCHOG00000008814	SBNO1	96	94.231	ENSCJAG00000016599	SBNO1	96	94.231	Callithrix_jacchus
ENSCHOG00000008814	SBNO1	96	94.434	ENSCAFG00000007503	SBNO1	96	94.434	Canis_familiaris
ENSCHOG00000008814	SBNO1	96	93.462	ENSCAFG00020015363	SBNO1	96	93.462	Canis_lupus_dingo
ENSCHOG00000008814	SBNO1	96	94.803	ENSCHIG00000008382	SBNO1	95	98.537	Capra_hircus
ENSCHOG00000008814	SBNO1	96	94.712	ENSTSYG00000012749	SBNO1	95	98.049	Carlito_syrichta
ENSCHOG00000008814	SBNO1	91	94.070	ENSCAPG00000000384	SBNO1	95	99.024	Cavia_aperea
ENSCHOG00000008814	SBNO1	91	99.024	ENSCPOG00000008109	SBNO1	95	99.024	Cavia_porcellus
ENSCHOG00000008814	SBNO1	91	94.070	ENSCCAG00000035316	SBNO1	94	97.902	Cebus_capucinus
ENSCHOG00000008814	SBNO1	93	94.283	ENSCATG00000008239	SBNO1	94	98.529	Cercocebus_atys
ENSCHOG00000008814	SBNO1	91	98.537	ENSCLAG00000008995	SBNO1	95	98.537	Chinchilla_lanigera
ENSCHOG00000008814	SBNO1	79	98.882	ENSCSAG00000002064	SBNO1	95	98.882	Chlorocebus_sabaeus
ENSCHOG00000008814	SBNO1	96	89.327	ENSCPBG00000025968	SBNO1	94	89.327	Chrysemys_picta_bellii
ENSCHOG00000008814	SBNO1	96	91.162	ENSCANG00000042688	-	96	91.066	Colobus_angolensis_palliatus
ENSCHOG00000008814	SBNO1	96	93.558	ENSCGRG00001017470	Sbno1	95	95.122	Cricetulus_griseus_chok1gshd
ENSCHOG00000008814	SBNO1	96	93.558	ENSCGRG00000004756	Sbno1	95	95.122	Cricetulus_griseus_crigri
ENSCHOG00000008814	SBNO1	96	72.249	ENSCSEG00000011919	sbno1	96	73.016	Cynoglossus_semilaevis
ENSCHOG00000008814	SBNO1	96	72.770	ENSCVAG00000007038	sbno1	96	73.346	Cyprinodon_variegatus
ENSCHOG00000008814	SBNO1	95	75.905	ENSDARG00000099080	sbno1	96	76.476	Danio_rerio
ENSCHOG00000008814	SBNO1	96	93.827	ENSDNOG00000017147	SBNO1	98	94.861	Dasypus_novemcinctus
ENSCHOG00000008814	SBNO1	89	96.565	ENSDORG00000015261	Sbno1	93	96.565	Dipodomys_ordii
ENSCHOG00000008814	SBNO1	91	86.885	ENSETEG00000005620	SBNO1	91	86.885	Echinops_telfairi
ENSCHOG00000008814	SBNO1	58	72.368	ENSEBUG00000013823	sbno1	77	71.856	Eptatretus_burgeri
ENSCHOG00000008814	SBNO1	51	89.548	ENSEASG00005012595	-	92	89.831	Equus_asinus_asinus
ENSCHOG00000008814	SBNO1	96	95.096	ENSECAG00000006127	SBNO1	96	95.096	Equus_caballus
ENSCHOG00000008814	SBNO1	78	91.859	ENSEEUG00000003793	SBNO1	78	91.859	Erinaceus_europaeus
ENSCHOG00000008814	SBNO1	96	74.251	ENSELUG00000002886	sbno1	96	74.251	Esox_lucius
ENSCHOG00000008814	SBNO1	96	95.096	ENSFCAG00000015331	SBNO1	96	95.096	Felis_catus
ENSCHOG00000008814	SBNO1	96	88.643	ENSFALG00000009273	SBNO1	96	88.750	Ficedula_albicollis
ENSCHOG00000008814	SBNO1	96	93.359	ENSFDAG00000014232	SBNO1	96	93.359	Fukomys_damarensis
ENSCHOG00000008814	SBNO1	96	73.062	ENSFHEG00000007360	sbno1	96	73.146	Fundulus_heteroclitus
ENSCHOG00000008814	SBNO1	90	76.715	ENSGMOG00000018229	sbno1	95	77.720	Gadus_morhua
ENSCHOG00000008814	SBNO1	84	94.697	ENSGALG00000003392	SBNO1	94	94.697	Gallus_gallus
ENSCHOG00000008814	SBNO1	96	73.189	ENSGAFG00000003960	sbno1	96	73.228	Gambusia_affinis
ENSCHOG00000008814	SBNO1	94	72.290	ENSGACG00000015633	sbno1	99	72.366	Gasterosteus_aculeatus
ENSCHOG00000008814	SBNO1	93	96.154	ENSGAGG00000001065	SBNO1	95	96.154	Gopherus_agassizii
ENSCHOG00000008814	SBNO1	96	94.418	ENSGGOG00000015000	SBNO1	96	94.418	Gorilla_gorilla
ENSCHOG00000008814	SBNO1	90	72.588	ENSHBUG00000011910	sbno1	92	72.529	Haplochromis_burtoni
ENSCHOG00000008814	SBNO1	91	100.000	ENSHGLG00000014165	-	95	98.086	Heterocephalus_glaber_female
ENSCHOG00000008814	SBNO1	84	93.467	ENSHCOG00000003246	sbno1	88	93.467	Hippocampus_comes
ENSCHOG00000008814	SBNO1	96	75.996	ENSIPUG00000015830	Sbno1	93	85.586	Ictalurus_punctatus
ENSCHOG00000008814	SBNO1	96	94.514	ENSSTOG00000023221	SBNO1	95	98.049	Ictidomys_tridecemlineatus
ENSCHOG00000008814	SBNO1	96	93.846	ENSJJAG00000001741	Sbno1	96	98.049	Jaculus_jaculus
ENSCHOG00000008814	SBNO1	95	73.026	ENSKMAG00000009696	sbno1	96	72.829	Kryptolebias_marmoratus
ENSCHOG00000008814	SBNO1	96	73.023	ENSLBEG00000007623	sbno1	96	73.302	Labrus_bergylta
ENSCHOG00000008814	SBNO1	95	81.679	ENSLACG00000017227	SBNO1	95	82.645	Latimeria_chalumnae
ENSCHOG00000008814	SBNO1	96	77.704	ENSLOCG00000005725	sbno1	93	77.894	Lepisosteus_oculatus
ENSCHOG00000008814	SBNO1	96	94.038	ENSLAFG00000002135	SBNO1	96	94.038	Loxodonta_africana
ENSCHOG00000008814	SBNO1	96	94.327	ENSMFAG00000031429	SBNO1	95	98.049	Macaca_fascicularis
ENSCHOG00000008814	SBNO1	96	94.418	ENSMMUG00000011496	SBNO1	95	98.049	Macaca_mulatta
ENSCHOG00000008814	SBNO1	96	94.423	ENSMLEG00000033260	SBNO1	95	98.049	Mandrillus_leucophaeus
ENSCHOG00000008814	SBNO1	96	73.239	ENSMAMG00000005473	sbno1	96	74.212	Mastacembelus_armatus
ENSCHOG00000008814	SBNO1	96	88.547	ENSMGAG00000003274	SBNO1	94	94.697	Meleagris_gallopavo
ENSCHOG00000008814	SBNO1	50	87.822	ENSMAUG00000004834	-	100	88.395	Mesocricetus_auratus
ENSCHOG00000008814	SBNO1	96	93.173	ENSMICG00000006573	-	96	93.173	Microcebus_murinus
ENSCHOG00000008814	SBNO1	91	97.073	ENSMOCG00000009390	Sbno1	95	97.073	Microtus_ochrogaster
ENSCHOG00000008814	SBNO1	96	70.990	ENSMMOG00000008691	sbno1	94	70.990	Mola_mola
ENSCHOG00000008814	SBNO1	96	90.962	ENSMODG00000012470	SBNO1	94	91.442	Monodelphis_domestica
ENSCHOG00000008814	SBNO1	99	69.306	ENSMALG00000001056	sbno1	96	73.048	Monopterus_albus
ENSCHOG00000008814	SBNO1	96	93.455	MGP_CAROLIEiJ_G0027749	Sbno1	95	99.561	Mus_caroli
ENSCHOG00000008814	SBNO1	96	94.033	ENSMUSG00000038095	Sbno1	94	99.561	Mus_musculus
ENSCHOG00000008814	SBNO1	96	93.840	MGP_PahariEiJ_G0024329	Sbno1	95	99.561	Mus_pahari
ENSCHOG00000008814	SBNO1	96	93.744	MGP_SPRETEiJ_G0028747	Sbno1	95	99.561	Mus_spretus
ENSCHOG00000008814	SBNO1	96	94.904	ENSMPUG00000001658	SBNO1	96	94.904	Mustela_putorius_furo
ENSCHOG00000008814	SBNO1	96	94.327	ENSMLUG00000017159	SBNO1	96	94.327	Myotis_lucifugus
ENSCHOG00000008814	SBNO1	96	94.231	ENSNGAG00000012620	Sbno1	96	94.231	Nannospalax_galili
ENSCHOG00000008814	SBNO1	96	71.538	ENSNBRG00000019189	sbno1	95	71.483	Neolamprologus_brichardi
ENSCHOG00000008814	SBNO1	96	94.321	ENSNLEG00000001502	SBNO1	97	98.049	Nomascus_leucogenys
ENSCHOG00000008814	SBNO1	67	75.000	ENSMEUG00000008768	-	93	87.975	Notamacropus_eugenii
ENSCHOG00000008814	SBNO1	96	90.192	ENSOPRG00000011054	SBNO1	96	90.096	Ochotona_princeps
ENSCHOG00000008814	SBNO1	96	93.551	ENSODEG00000009997	SBNO1	96	93.551	Octodon_degus
ENSCHOG00000008814	SBNO1	96	73.246	ENSONIG00000015348	sbno1	96	73.371	Oreochromis_niloticus
ENSCHOG00000008814	SBNO1	90	98.611	ENSOCUG00000002441	SBNO1	87	98.611	Oryctolagus_cuniculus
ENSCHOG00000008814	SBNO1	99	69.480	ENSORLG00000001593	sbno1	99	69.480	Oryzias_latipes
ENSCHOG00000008814	SBNO1	99	69.669	ENSORLG00020015216	sbno1	96	72.872	Oryzias_latipes_hni
ENSCHOG00000008814	SBNO1	99	69.599	ENSORLG00015002726	sbno1	99	69.529	Oryzias_latipes_hsok
ENSCHOG00000008814	SBNO1	99	69.915	ENSOMEG00000019313	sbno1	99	69.845	Oryzias_melastigma
ENSCHOG00000008814	SBNO1	50	89.255	ENSOGAG00000010781	-	100	89.542	Otolemur_garnettii
ENSCHOG00000008814	SBNO1	96	94.524	ENSOARG00000004404	SBNO1	96	94.524	Ovis_aries
ENSCHOG00000008814	SBNO1	96	94.519	ENSPPAG00000024635	SBNO1	96	94.519	Pan_paniscus
ENSCHOG00000008814	SBNO1	96	95.096	ENSPPRG00000022092	SBNO1	96	95.096	Panthera_pardus
ENSCHOG00000008814	SBNO1	96	94.519	ENSPTIG00000017803	SBNO1	96	94.712	Panthera_tigris_altaica
ENSCHOG00000008814	SBNO1	96	94.519	ENSPTRG00000005597	SBNO1	96	94.519	Pan_troglodytes
ENSCHOG00000008814	SBNO1	96	94.418	ENSPANG00000011640	SBNO1	95	98.049	Papio_anubis
ENSCHOG00000008814	SBNO1	96	76.982	ENSPKIG00000001441	sbno1	96	77.290	Paramormyrops_kingsleyae
ENSCHOG00000008814	SBNO1	96	88.038	ENSPSIG00000009572	-	96	88.038	Pelodiscus_sinensis
ENSCHOG00000008814	SBNO1	88	85.536	ENSPSIG00000009256	-	95	85.536	Pelodiscus_sinensis
ENSCHOG00000008814	SBNO1	96	93.269	ENSPEMG00000016087	Sbno1	95	95.610	Peromyscus_maniculatus_bairdii
ENSCHOG00000008814	SBNO1	96	90.394	ENSPCIG00000010985	SBNO1	96	91.066	Phascolarctos_cinereus
ENSCHOG00000008814	SBNO1	96	73.402	ENSPFOG00000005069	sbno1	96	73.439	Poecilia_formosa
ENSCHOG00000008814	SBNO1	96	73.214	ENSPLAG00000015015	sbno1	96	73.483	Poecilia_latipinna
ENSCHOG00000008814	SBNO1	96	73.521	ENSPMEG00000021212	sbno1	96	73.650	Poecilia_mexicana
ENSCHOG00000008814	SBNO1	88	83.251	ENSPREG00000017746	sbno1	93	83.150	Poecilia_reticulata
ENSCHOG00000008814	SBNO1	96	94.033	ENSPPYG00000005084	SBNO1	96	94.033	Pongo_abelii
ENSCHOG00000008814	SBNO1	79	88.203	ENSPCAG00000008634	SBNO1	79	88.154	Procavia_capensis
ENSCHOG00000008814	SBNO1	96	94.615	ENSPCOG00000024277	SBNO1	95	98.985	Propithecus_coquereli
ENSCHOG00000008814	SBNO1	83	100.000	ENSPVAG00000015304	SBNO1	83	100.000	Pteropus_vampyrus
ENSCHOG00000008814	SBNO1	96	74.190	ENSPNYG00000004291	sbno1	96	73.934	Pundamilia_nyererei
ENSCHOG00000008814	SBNO1	96	75.640	ENSPNAG00000015622	sbno1	96	75.640	Pygocentrus_nattereri
ENSCHOG00000008814	SBNO1	96	93.942	ENSRNOG00000001064	Sbno1	95	98.537	Rattus_norvegicus
ENSCHOG00000008814	SBNO1	96	94.423	ENSRROG00000034230	SBNO1	95	98.049	Rhinopithecus_roxellana
ENSCHOG00000008814	SBNO1	92	94.405	ENSSBOG00000015422	SBNO1	97	94.405	Saimiri_boliviensis_boliviensis
ENSCHOG00000008814	SBNO1	96	76.050	ENSSFOG00015019025	sbno1	96	76.908	Scleropages_formosus
ENSCHOG00000008814	SBNO1	96	74.594	ENSSMAG00000013640	sbno1	96	74.881	Scophthalmus_maximus
ENSCHOG00000008814	SBNO1	99	69.684	ENSSDUG00000023480	sbno1	97	75.540	Seriola_dumerili
ENSCHOG00000008814	SBNO1	96	73.066	ENSSLDG00000007928	sbno1	98	75.454	Seriola_lalandi_dorsalis
ENSCHOG00000008814	SBNO1	85	96.604	ENSSARG00000002594	SBNO1	85	96.604	Sorex_araneus
ENSCHOG00000008814	SBNO1	96	85.192	ENSSPUG00000012640	SBNO1	96	85.481	Sphenodon_punctatus
ENSCHOG00000008814	SBNO1	96	72.940	ENSSPAG00000016244	sbno1	96	72.356	Stegastes_partitus
ENSCHOG00000008814	SBNO1	96	94.803	ENSSSCG00000009776	SBNO1	98	94.803	Sus_scrofa
ENSCHOG00000008814	SBNO1	96	88.354	ENSTGUG00000005380	SBNO1	96	88.462	Taeniopygia_guttata
ENSCHOG00000008814	SBNO1	95	72.710	ENSTRUG00000018490	sbno1	96	72.923	Takifugu_rubripes
ENSCHOG00000008814	SBNO1	56	68.765	ENSTNIG00000013506	sbno1	99	68.859	Tetraodon_nigroviridis
ENSCHOG00000008814	SBNO1	96	94.712	ENSUAMG00000019671	SBNO1	96	94.712	Ursus_americanus
ENSCHOG00000008814	SBNO1	96	94.712	ENSUMAG00000004002	SBNO1	96	94.712	Ursus_maritimus
ENSCHOG00000008814	SBNO1	86	98.352	ENSVPAG00000007024	SBNO1	86	98.352	Vicugna_pacos
ENSCHOG00000008814	SBNO1	96	94.712	ENSVVUG00000027807	SBNO1	96	94.712	Vulpes_vulpes
ENSCHOG00000008814	SBNO1	96	79.452	ENSXETG00000031930	SBNO1	96	79.452	Xenopus_tropicalis
ENSCHOG00000008814	SBNO1	84	73.175	ENSXCOG00000011607	sbno1	91	78.512	Xiphophorus_couchianus
ENSCHOG00000008814	SBNO1	96	73.521	ENSXMAG00000002140	sbno1	96	73.414	Xiphophorus_maculatus