EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000008967 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 13434 bases
Position: chrGeneScaffold_7312:80461-93894
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007930	RRM_1	PF00076.22	9.7e-09	1	1
ENSCHOP00000007930	RRM_3	PF08777.11	3.4e-25	1	1
ENSCHOP00000007930	La	PF05383.17	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008989	-	1590	-	ENSCHOP00000007930	529 (aa)	-	UPI0001F9FE68

Gene Model

Click here to download ENSCHOG00000008967's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000008967	-	100	82.004	ENSCHOG00000002379	-	93	82.189

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008967	-	100	75.741	ENSG00000174720	LARP7	93	75.741	Homo_sapiens
ENSCHOG00000008967	-	99	47.005	ENSAPOG00000014570	larp7	92	45.438	Acanthochromis_polyacanthus
ENSCHOG00000008967	-	100	76.525	ENSAMEG00000015642	LARP7	93	76.525	Ailuropoda_melanoleuca
ENSCHOG00000008967	-	99	47.320	ENSACIG00000023850	larp7	92	46.679	Amphilophus_citrinellus
ENSCHOG00000008967	-	99	47.550	ENSAOCG00000016160	larp7	92	45.975	Amphiprion_ocellaris
ENSCHOG00000008967	-	99	47.920	ENSAPEG00000021823	larp7	92	47.292	Amphiprion_percula
ENSCHOG00000008967	-	99	48.736	ENSATEG00000016238	larp7	92	49.189	Anabas_testudineus
ENSCHOG00000008967	-	99	61.250	ENSAPLG00000012887	LARP7	92	61.290	Anas_platyrhynchos
ENSCHOG00000008967	-	99	59.710	ENSACAG00000010662	LARP7	88	59.347	Anolis_carolinensis
ENSCHOG00000008967	-	100	73.801	ENSANAG00000031139	-	93	73.801	Aotus_nancymaae
ENSCHOG00000008967	-	92	79.091	ENSANAG00000022318	-	81	79.091	Aotus_nancymaae
ENSCHOG00000008967	-	99	46.570	ENSACLG00000023184	larp7	92	46.558	Astatotilapia_calliptera
ENSCHOG00000008967	-	70	64.881	ENSAMXG00000002549	larp7	92	45.985	Astyanax_mexicanus
ENSCHOG00000008967	-	100	72.913	ENSBTAG00000009632	LARP7	93	73.704	Bos_taurus
ENSCHOG00000008967	-	100	75.231	ENSCJAG00000003711	LARP7	93	75.231	Callithrix_jacchus
ENSCHOG00000008967	-	100	75.000	ENSCAFG00000011715	LARP7	93	75.000	Canis_familiaris
ENSCHOG00000008967	-	100	75.970	ENSCAFG00020017225	LARP7	93	75.970	Canis_lupus_dingo
ENSCHOG00000008967	-	100	73.333	ENSCHIG00000014163	-	93	73.333	Capra_hircus
ENSCHOG00000008967	-	87	78.899	ENSCHIG00000013971	-	86	78.899	Capra_hircus
ENSCHOG00000008967	-	99	67.222	ENSTSYG00000035188	-	95	66.852	Carlito_syrichta
ENSCHOG00000008967	-	93	75.397	ENSTSYG00000006769	-	92	75.000	Carlito_syrichta
ENSCHOG00000008967	-	100	62.222	ENSCAPG00000009328	LARP7	93	63.771	Cavia_aperea
ENSCHOG00000008967	-	100	70.556	ENSCPOG00000011830	LARP7	93	71.719	Cavia_porcellus
ENSCHOG00000008967	-	100	67.897	ENSCCAG00000023563	-	97	66.728	Cebus_capucinus
ENSCHOG00000008967	-	100	75.277	ENSCCAG00000026787	-	93	75.277	Cebus_capucinus
ENSCHOG00000008967	-	100	75.741	ENSCATG00000043535	LARP7	93	75.741	Cercocebus_atys
ENSCHOG00000008967	-	90	90.909	ENSCLAG00000005894	LARP7	85	90.909	Chinchilla_lanigera
ENSCHOG00000008967	-	100	75.741	ENSCSAG00000003810	LARP7	93	75.741	Chlorocebus_sabaeus
ENSCHOG00000008967	-	100	61.622	ENSCPBG00000004919	LARP7	94	62.703	Chrysemys_picta_bellii
ENSCHOG00000008967	-	74	34.247	ENSCING00000021685	-	72	34.247	Ciona_intestinalis
ENSCHOG00000008967	-	100	75.741	ENSCANG00000031482	LARP7	92	75.741	Colobus_angolensis_palliatus
ENSCHOG00000008967	-	89	60.494	ENSCGRG00001012747	-	92	60.494	Cricetulus_griseus_chok1gshd
ENSCHOG00000008967	-	100	71.823	ENSCGRG00001025050	-	93	71.823	Cricetulus_griseus_chok1gshd
ENSCHOG00000008967	-	95	63.654	ENSCGRG00000001141	-	82	92.857	Cricetulus_griseus_crigri
ENSCHOG00000008967	-	95	62.863	ENSCGRG00000007642	-	92	62.476	Cricetulus_griseus_crigri
ENSCHOG00000008967	-	99	46.570	ENSCSEG00000009088	larp7	92	46.595	Cynoglossus_semilaevis
ENSCHOG00000008967	-	99	48.429	ENSCVAG00000016852	larp7	91	47.874	Cyprinodon_variegatus
ENSCHOG00000008967	-	99	48.327	ENSDARG00000017315	larp7	91	46.679	Danio_rerio
ENSCHOG00000008967	-	100	79.151	ENSDNOG00000013761	LARP7	93	79.151	Dasypus_novemcinctus
ENSCHOG00000008967	-	100	74.677	ENSDORG00000008896	-	93	74.677	Dipodomys_ordii
ENSCHOG00000008967	-	100	70.980	ENSETEG00000011692	LARP7	92	70.872	Echinops_telfairi
ENSCHOG00000008967	-	68	50.000	ENSEBUG00000013808	larp7	62	50.000	Eptatretus_burgeri
ENSCHOG00000008967	-	100	76.710	ENSEASG00005005592	LARP7	93	76.710	Equus_asinus_asinus
ENSCHOG00000008967	-	100	77.264	ENSECAG00000000834	LARP7	93	77.264	Equus_caballus
ENSCHOG00000008967	-	95	70.370	ENSEEUG00000012824	LARP7	92	70.370	Erinaceus_europaeus
ENSCHOG00000008967	-	99	48.029	ENSELUG00000015341	larp7	92	48.639	Esox_lucius
ENSCHOG00000008967	-	100	77.079	ENSFCAG00000031966	LARP7	93	77.079	Felis_catus
ENSCHOG00000008967	-	99	62.025	ENSFALG00000000972	LARP7	90	62.025	Ficedula_albicollis
ENSCHOG00000008967	-	100	72.643	ENSFDAG00000014048	-	93	68.450	Fukomys_damarensis
ENSCHOG00000008967	-	100	69.794	ENSFDAG00000011855	-	93	70.356	Fukomys_damarensis
ENSCHOG00000008967	-	99	47.253	ENSFHEG00000021652	larp7	92	47.882	Fundulus_heteroclitus
ENSCHOG00000008967	-	99	60.799	ENSGALG00000012048	LARP7	92	60.759	Gallus_gallus
ENSCHOG00000008967	-	99	48.000	ENSGAFG00000015400	larp7	92	47.514	Gambusia_affinis
ENSCHOG00000008967	-	88	65.741	ENSGACG00000019618	larp7	83	65.741	Gasterosteus_aculeatus
ENSCHOG00000008967	-	100	61.331	ENSGAGG00000024520	LARP7	92	62.410	Gopherus_agassizii
ENSCHOG00000008967	-	94	72.134	ENSGGOG00000006438	-	97	72.134	Gorilla_gorilla
ENSCHOG00000008967	-	100	75.741	ENSGGOG00000023567	-	93	75.741	Gorilla_gorilla
ENSCHOG00000008967	-	99	46.751	ENSHBUG00000019223	larp7	92	46.739	Haplochromis_burtoni
ENSCHOG00000008967	-	100	73.616	ENSHGLG00000002716	LARP7	93	73.616	Heterocephalus_glaber_female
ENSCHOG00000008967	-	100	73.616	ENSHGLG00100000332	LARP7	93	73.616	Heterocephalus_glaber_male
ENSCHOG00000008967	-	71	62.941	ENSHCOG00000000664	LARP7	71	62.941	Hippocampus_comes
ENSCHOG00000008967	-	88	70.370	ENSIPUG00000019886	larp7	83	70.370	Ictalurus_punctatus
ENSCHOG00000008967	-	100	75.970	ENSSTOG00000011789	LARP7	93	77.079	Ictidomys_tridecemlineatus
ENSCHOG00000008967	-	100	73.297	ENSJJAG00000000257	-	93	72.744	Jaculus_jaculus
ENSCHOG00000008967	-	99	46.875	ENSKMAG00000005057	larp7	92	47.310	Kryptolebias_marmoratus
ENSCHOG00000008967	-	88	67.290	ENSLBEG00000020062	larp7	81	67.290	Labrus_bergylta
ENSCHOG00000008967	-	100	53.464	ENSLACG00000013744	LARP7	93	53.996	Latimeria_chalumnae
ENSCHOG00000008967	-	99	44.234	ENSLOCG00000011608	larp7	92	43.471	Lepisosteus_oculatus
ENSCHOG00000008967	-	100	78.085	ENSLAFG00000015769	LARP7	93	78.085	Loxodonta_africana
ENSCHOG00000008967	-	100	75.741	ENSMFAG00000036506	LARP7	93	75.741	Macaca_fascicularis
ENSCHOG00000008967	-	100	75.741	ENSMMUG00000017911	LARP7	93	75.741	Macaca_mulatta
ENSCHOG00000008967	-	100	75.926	ENSMNEG00000034758	LARP7	100	74.206	Macaca_nemestrina
ENSCHOG00000008967	-	100	75.926	ENSMLEG00000026154	LARP7	93	75.926	Mandrillus_leucophaeus
ENSCHOG00000008967	-	99	47.464	ENSMAMG00000005835	larp7	79	64.881	Mastacembelus_armatus
ENSCHOG00000008967	-	99	46.570	ENSMZEG00005002084	larp7	92	46.558	Maylandia_zebra
ENSCHOG00000008967	-	99	60.512	ENSMGAG00000010947	LARP7	92	60.474	Meleagris_gallopavo
ENSCHOG00000008967	-	72	98.077	ENSMAUG00000005625	-	79	98.077	Mesocricetus_auratus
ENSCHOG00000008967	-	100	77.407	ENSMICG00000031035	LARP7	93	77.963	Microcebus_murinus
ENSCHOG00000008967	-	96	68.979	ENSMOCG00000015761	-	100	68.979	Microtus_ochrogaster
ENSCHOG00000008967	-	100	72.458	ENSMOCG00000012519	-	93	72.458	Microtus_ochrogaster
ENSCHOG00000008967	-	99	67.027	ENSMODG00000005669	LARP7	93	67.568	Monodelphis_domestica
ENSCHOG00000008967	-	100	71.087	MGP_CAROLIEiJ_G0025613	-	93	71.271	Mus_caroli
ENSCHOG00000008967	-	100	70.111	ENSMUSG00000027968	Larp7	94	70.295	Mus_musculus
ENSCHOG00000008967	-	100	71.587	MGP_PahariEiJ_G0027060	-	93	71.771	Mus_pahari
ENSCHOG00000008967	-	100	70.956	MGP_SPRETEiJ_G0026566	Larp7	93	71.140	Mus_spretus
ENSCHOG00000008967	-	100	75.185	ENSMPUG00000008331	-	93	75.185	Mustela_putorius_furo
ENSCHOG00000008967	-	99	71.322	ENSMPUG00000018052	-	97	71.747	Mustela_putorius_furo
ENSCHOG00000008967	-	93	67.594	ENSMLUG00000027214	LARP7	100	67.594	Myotis_lucifugus
ENSCHOG00000008967	-	100	71.771	ENSNGAG00000007368	-	93	71.771	Nannospalax_galili
ENSCHOG00000008967	-	100	75.556	ENSNLEG00000016354	LARP7	91	75.556	Nomascus_leucogenys
ENSCHOG00000008967	-	94	64.453	ENSMEUG00000004739	LARP7	100	64.062	Notamacropus_eugenii
ENSCHOG00000008967	-	83	87.273	ENSOPRG00000009594	-	76	87.273	Ochotona_princeps
ENSCHOG00000008967	-	95	69.380	ENSODEG00000011121	LARP7	91	70.406	Octodon_degus
ENSCHOG00000008967	-	99	46.390	ENSONIG00000008763	larp7	92	46.739	Oreochromis_niloticus
ENSCHOG00000008967	-	99	66.667	ENSOANG00000009298	LARP7	92	66.667	Ornithorhynchus_anatinus
ENSCHOG00000008967	-	100	73.840	ENSOCUG00000007073	LARP7	93	73.840	Oryctolagus_cuniculus
ENSCHOG00000008967	-	99	46.580	ENSORLG00000004978	larp7	92	46.396	Oryzias_latipes
ENSCHOG00000008967	-	99	46.765	ENSORLG00020013825	larp7	91	46.580	Oryzias_latipes_hni
ENSCHOG00000008967	-	99	46.507	ENSOMEG00000006920	larp7	92	47.177	Oryzias_melastigma
ENSCHOG00000008967	-	100	76.015	ENSOGAG00000001643	LARP7	93	76.015	Otolemur_garnettii
ENSCHOG00000008967	-	100	73.063	ENSOARG00000001809	LARP7	93	73.063	Ovis_aries
ENSCHOG00000008967	-	100	75.741	ENSPPAG00000038420	LARP7	91	75.741	Pan_paniscus
ENSCHOG00000008967	-	100	77.264	ENSPPRG00000023256	LARP7	93	77.264	Panthera_pardus
ENSCHOG00000008967	-	95	76.015	ENSPTIG00000021146	LARP7	89	75.869	Panthera_tigris_altaica
ENSCHOG00000008967	-	100	75.926	ENSPTRG00000016380	LARP7	93	75.926	Pan_troglodytes
ENSCHOG00000008967	-	100	75.926	ENSPANG00000006701	LARP7	92	75.926	Papio_anubis
ENSCHOG00000008967	-	99	50.000	ENSPKIG00000023484	larp7	91	49.909	Paramormyrops_kingsleyae
ENSCHOG00000008967	-	99	59.963	ENSPSIG00000014419	LARP7	91	61.060	Pelodiscus_sinensis
ENSCHOG00000008967	-	100	71.403	ENSPEMG00000013978	-	93	71.585	Peromyscus_maniculatus_bairdii
ENSCHOG00000008967	-	100	31.892	ENSPMAG00000005362	larp7	91	32.014	Petromyzon_marinus
ENSCHOG00000008967	-	100	65.054	ENSPCIG00000020284	LARP7	92	86.364	Phascolarctos_cinereus
ENSCHOG00000008967	-	99	46.655	ENSPFOG00000000265	larp7	92	47.243	Poecilia_formosa
ENSCHOG00000008967	-	99	46.655	ENSPLAG00000012181	larp7	92	47.243	Poecilia_latipinna
ENSCHOG00000008967	-	99	46.655	ENSPMEG00000007182	larp7	92	47.243	Poecilia_mexicana
ENSCHOG00000008967	-	99	45.887	ENSPREG00000019513	larp7	92	46.324	Poecilia_reticulata
ENSCHOG00000008967	-	100	75.741	ENSPPYG00000015010	LARP7	93	75.741	Pongo_abelii
ENSCHOG00000008967	-	54	96.154	ENSPCAG00000003373	-	60	96.154	Procavia_capensis
ENSCHOG00000008967	-	78	96.000	ENSPCOG00000023946	LARP7	82	96.000	Propithecus_coquereli
ENSCHOG00000008967	-	100	70.926	ENSPVAG00000000282	LARP7	93	70.926	Pteropus_vampyrus
ENSCHOG00000008967	-	99	47.731	ENSPNAG00000017554	larp7	92	46.824	Pygocentrus_nattereri
ENSCHOG00000008967	-	100	70.902	ENSRNOG00000048989	Larp7	93	71.455	Rattus_norvegicus
ENSCHOG00000008967	-	77	96.296	ENSRBIG00000031916	LARP7	82	96.296	Rhinopithecus_bieti
ENSCHOG00000008967	-	100	75.741	ENSRROG00000033414	LARP7	93	75.741	Rhinopithecus_roxellana
ENSCHOG00000008967	-	96	57.663	ENSSBOG00000022652	-	93	57.663	Saimiri_boliviensis_boliviensis
ENSCHOG00000008967	-	100	75.461	ENSSBOG00000030886	-	93	75.461	Saimiri_boliviensis_boliviensis
ENSCHOG00000008967	-	100	64.865	ENSSHAG00000008153	LARP7	93	64.685	Sarcophilus_harrisii
ENSCHOG00000008967	-	99	48.276	ENSSFOG00015019344	larp7	92	48.294	Scleropages_formosus
ENSCHOG00000008967	-	99	48.007	ENSSMAG00000011296	larp7	92	47.834	Scophthalmus_maximus
ENSCHOG00000008967	-	99	48.188	ENSSDUG00000007045	larp7	92	48.175	Seriola_dumerili
ENSCHOG00000008967	-	55	71.429	ENSSARG00000000190	-	97	71.429	Sorex_araneus
ENSCHOG00000008967	-	99	47.387	ENSSPAG00000016066	larp7	92	47.027	Stegastes_partitus
ENSCHOG00000008967	-	100	75.830	ENSSSCG00000009119	LARP7	93	75.830	Sus_scrofa
ENSCHOG00000008967	-	99	61.060	ENSTGUG00000001804	LARP7	92	61.931	Taeniopygia_guttata
ENSCHOG00000008967	-	70	62.275	ENSTRUG00000004996	larp7	93	43.178	Takifugu_rubripes
ENSCHOG00000008967	-	99	41.436	ENSTNIG00000007183	larp7	92	41.468	Tetraodon_nigroviridis
ENSCHOG00000008967	-	100	68.333	ENSTBEG00000009188	LARP7	93	68.333	Tupaia_belangeri
ENSCHOG00000008967	-	97	73.143	ENSTTRG00000005233	LARP7	100	73.905	Tursiops_truncatus
ENSCHOG00000008967	-	100	76.340	ENSUAMG00000000836	LARP7	93	76.340	Ursus_americanus
ENSCHOG00000008967	-	98	75.610	ENSUMAG00000002263	LARP7	91	75.610	Ursus_maritimus
ENSCHOG00000008967	-	100	77.264	ENSVPAG00000010502	LARP7	93	77.264	Vicugna_pacos
ENSCHOG00000008967	-	100	76.155	ENSVVUG00000002274	LARP7	93	76.155	Vulpes_vulpes
ENSCHOG00000008967	-	99	53.694	ENSXETG00000024097	larp7	92	53.514	Xenopus_tropicalis
ENSCHOG00000008967	-	99	47.486	ENSXCOG00000004883	larp7	77	64.072	Xiphophorus_couchianus
ENSCHOG00000008967	-	99	46.196	ENSXMAG00000008479	larp7	92	46.777	Xiphophorus_maculatus