EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000008972 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 1111 bases
Position: chrscaffold_193623:3014-4124
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000007932	PRP38	PF03371.15	4.8e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000008991	-	945	-	ENSCHOP00000007932	315 (aa)	-	UPI0001F9FE6D

Gene Model

Click here to download ENSCHOG00000008972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000008972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000008972	-	95	58.721	ENSATEG00000014482	-	51	74.059	Anabas_testudineus
ENSCHOG00000008972	-	100	86.119	ENSBTAG00000047874	PRPF38B	65	84.136	Bos_taurus
ENSCHOG00000008972	-	94	58.507	ENSCAFG00020010992	-	62	68.839	Canis_lupus_dingo
ENSCHOG00000008972	-	100	86.119	ENSCHIG00000024357	-	65	84.136	Capra_hircus
ENSCHOG00000008972	-	82	76.871	ENSCAPG00000009606	-	69	79.195	Cavia_aperea
ENSCHOG00000008972	-	94	80.896	ENSCPOG00000039545	-	64	83.853	Cavia_porcellus
ENSCHOG00000008972	-	94	81.845	ENSCLAG00000005801	-	65	84.746	Chinchilla_lanigera
ENSCHOG00000008972	-	93	77.273	ENSCPBG00000028299	-	64	78.187	Chrysemys_picta_bellii
ENSCHOG00000008972	-	75	57.563	ENSCSAVG00000009443	-	73	64.975	Ciona_savignyi
ENSCHOG00000008972	-	97	77.843	ENSETEG00000014690	-	78	79.887	Echinops_telfairi
ENSCHOG00000008972	-	93	73.939	ENSFALG00000002673	-	64	76.807	Ficedula_albicollis
ENSCHOG00000008972	-	93	76.667	ENSGALG00000001972	-	64	75.354	Gallus_gallus
ENSCHOG00000008972	-	98	59.659	ENSGAFG00000008943	-	51	73.950	Gambusia_affinis
ENSCHOG00000008972	-	100	75.921	ENSGAGG00000001563	-	64	78.470	Gopherus_agassizii
ENSCHOG00000008972	-	94	81.493	ENSHGLG00000016583	PRPF38B	64	83.003	Heterocephalus_glaber_female
ENSCHOG00000008972	-	94	81.194	ENSHGLG00100015525	-	64	82.720	Heterocephalus_glaber_male
ENSCHOG00000008972	-	69	78.906	ENSMOCG00000020285	-	65	82.955	Microtus_ochrogaster
ENSCHOG00000008972	-	74	76.103	ENSMODG00000002350	-	82	83.399	Monodelphis_domestica
ENSCHOG00000008972	-	62	69.874	ENSMALG00000019479	-	51	73.640	Monopterus_albus
ENSCHOG00000008972	-	53	100.000	ENSMEUG00000004859	-	57	81.119	Notamacropus_eugenii
ENSCHOG00000008972	-	97	61.254	ENSONIG00000010129	-	52	73.640	Oreochromis_niloticus
ENSCHOG00000008972	-	95	63.014	ENSOANG00000007343	-	60	83.203	Ornithorhynchus_anatinus
ENSCHOG00000008972	-	64	72.653	ENSORLG00000015621	-	67	92.241	Oryzias_latipes
ENSCHOG00000008972	-	98	61.190	ENSORLG00020016276	-	67	92.241	Oryzias_latipes_hni
ENSCHOG00000008972	-	98	61.190	ENSORLG00015016270	-	56	92.241	Oryzias_latipes_hsok
ENSCHOG00000008972	-	95	61.516	ENSOMEG00000022050	-	70	90.756	Oryzias_melastigma
ENSCHOG00000008972	-	97	82.216	ENSOGAG00000027048	-	65	83.569	Otolemur_garnettii
ENSCHOG00000008972	-	100	86.119	ENSOARG00000018899	-	66	84.136	Ovis_aries
ENSCHOG00000008972	-	93	76.667	ENSPSIG00000016569	-	64	79.037	Pelodiscus_sinensis
ENSCHOG00000008972	-	98	59.773	ENSPFOG00000004025	-	61	93.103	Poecilia_formosa
ENSCHOG00000008972	-	98	59.773	ENSPLAG00000019842	-	51	73.950	Poecilia_latipinna
ENSCHOG00000008972	-	98	59.773	ENSPMEG00000004807	-	50	73.950	Poecilia_mexicana
ENSCHOG00000008972	-	98	60.057	ENSPREG00000015599	-	63	93.103	Poecilia_reticulata
ENSCHOG00000008972	-	99	80.057	ENSRNOG00000020438	Prpf38b	65	82.955	Rattus_norvegicus
ENSCHOG00000008972	-	95	60.632	ENSSLDG00000023487	-	63	92.241	Seriola_lalandi_dorsalis
ENSCHOG00000008972	-	100	73.654	ENSSPUG00000017742	-	64	76.487	Sphenodon_punctatus
ENSCHOG00000008972	-	94	54.986	ENSTNIG00000015299	-	59	72.083	Tetraodon_nigroviridis
ENSCHOG00000008972	-	94	75.224	ENSTBEG00000007504	-	69	72.329	Tupaia_belangeri
ENSCHOG00000008972	-	100	86.119	ENSTTRG00000006479	-	65	84.703	Tursiops_truncatus
ENSCHOG00000008972	-	62	77.682	ENSVPAG00000005541	-	61	82.477	Vicugna_pacos
ENSCHOG00000008972	-	97	59.610	ENSXCOG00000008329	-	51	73.950	Xiphophorus_couchianus
ENSCHOG00000008972	-	97	59.610	ENSXMAG00000023831	-	51	73.950	Xiphophorus_maculatus