EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000009089 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 39988 bases
Position: chrscaffold_390:12479-52466
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000008042	DND1_DSRM	PF14709.7	3.5e-25	1	1
ENSCHOP00000008042	RRM_1	PF00076.22	2.2e-40	1	3
ENSCHOP00000008042	RRM_1	PF00076.22	2.2e-40	2	3
ENSCHOP00000008042	RRM_1	PF00076.22	2.2e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000009114	A1CF-201	1779	-	ENSCHOP00000008042	592 (aa)	-	UPI0001FA0027

Gene Model

Click here to download ENSCHOG00000009089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000009089's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000009089	A1CF	58	73.381	ENSCHOG00000003429	RBM46	65	73.381
ENSCHOG00000009089	A1CF	51	69.967	ENSCHOG00000011731	RBM47	69	56.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000009089	A1CF	99	91.582	ENSG00000148584	A1CF	99	91.414	Homo_sapiens
ENSCHOG00000009089	A1CF	98	71.138	ENSAPOG00000008259	a1cf	97	71.138	Acanthochromis_polyacanthus
ENSCHOG00000009089	A1CF	98	89.661	ENSAMEG00000000523	A1CF	98	90.000	Ailuropoda_melanoleuca
ENSCHOG00000009089	A1CF	98	73.746	ENSACIG00000008632	a1cf	98	75.084	Amphilophus_citrinellus
ENSCHOG00000009089	A1CF	98	71.692	ENSAOCG00000023744	a1cf	94	79.130	Amphiprion_ocellaris
ENSCHOG00000009089	A1CF	98	70.744	ENSAPEG00000009537	a1cf	97	71.570	Amphiprion_percula
ENSCHOG00000009089	A1CF	99	73.920	ENSATEG00000013720	a1cf	98	75.249	Anabas_testudineus
ENSCHOG00000009089	A1CF	99	82.997	ENSAPLG00000002964	A1CF	98	82.997	Anas_platyrhynchos
ENSCHOG00000009089	A1CF	98	81.304	ENSACAG00000015269	A1CF	98	81.304	Anolis_carolinensis
ENSCHOG00000009089	A1CF	99	90.713	ENSANAG00000019974	A1CF	99	90.698	Aotus_nancymaae
ENSCHOG00000009089	A1CF	98	70.903	ENSACLG00000017428	a1cf	97	72.575	Astatotilapia_calliptera
ENSCHOG00000009089	A1CF	89	76.654	ENSAMXG00000018180	a1cf	93	76.654	Astyanax_mexicanus
ENSCHOG00000009089	A1CF	98	91.065	ENSBTAG00000021195	A1CF	98	91.065	Bos_taurus
ENSCHOG00000009089	A1CF	98	90.355	ENSCJAG00000005045	A1CF	98	90.339	Callithrix_jacchus
ENSCHOG00000009089	A1CF	98	89.153	ENSCAFG00000015581	A1CF	98	89.492	Canis_familiaris
ENSCHOG00000009089	A1CF	98	89.153	ENSCAFG00020026421	A1CF	98	96.970	Canis_lupus_dingo
ENSCHOG00000009089	A1CF	98	89.492	ENSCHIG00000020411	A1CF	98	89.492	Capra_hircus
ENSCHOG00000009089	A1CF	100	88.833	ENSTSYG00000001755	A1CF	100	94.065	Carlito_syrichta
ENSCHOG00000009089	A1CF	86	94.332	ENSCAPG00000017386	A1CF	90	94.332	Cavia_aperea
ENSCHOG00000009089	A1CF	98	89.679	ENSCPOG00000009807	A1CF	98	89.492	Cavia_porcellus
ENSCHOG00000009089	A1CF	99	91.348	ENSCCAG00000018168	A1CF	99	91.167	Cebus_capucinus
ENSCHOG00000009089	A1CF	98	90.550	ENSCATG00000043715	A1CF	98	90.550	Cercocebus_atys
ENSCHOG00000009089	A1CF	98	89.509	ENSCLAG00000010424	A1CF	98	89.340	Chinchilla_lanigera
ENSCHOG00000009089	A1CF	98	89.322	ENSCSAG00000007032	A1CF	98	89.322	Chlorocebus_sabaeus
ENSCHOG00000009089	A1CF	99	82.997	ENSCPBG00000026464	A1CF	98	82.492	Chrysemys_picta_bellii
ENSCHOG00000009089	A1CF	98	89.492	ENSCANG00000038032	A1CF	98	89.492	Colobus_angolensis_palliatus
ENSCHOG00000009089	A1CF	98	87.797	ENSCGRG00001017413	A1cf	98	87.797	Cricetulus_griseus_chok1gshd
ENSCHOG00000009089	A1CF	98	87.288	ENSCGRG00000017332	A1cf	98	87.458	Cricetulus_griseus_crigri
ENSCHOG00000009089	A1CF	94	74.346	ENSCSEG00000002361	a1cf	95	75.393	Cynoglossus_semilaevis
ENSCHOG00000009089	A1CF	98	73.122	ENSCVAG00000010520	a1cf	98	74.624	Cyprinodon_variegatus
ENSCHOG00000009089	A1CF	99	75.336	ENSDARG00000002968	a1cf	99	76.678	Danio_rerio
ENSCHOG00000009089	A1CF	98	90.169	ENSDNOG00000002829	A1CF	98	90.169	Dasypus_novemcinctus
ENSCHOG00000009089	A1CF	84	90.378	ENSETEG00000012527	A1CF	84	90.378	Echinops_telfairi
ENSCHOG00000009089	A1CF	98	91.186	ENSEASG00005012924	A1CF	99	93.717	Equus_asinus_asinus
ENSCHOG00000009089	A1CF	98	91.017	ENSECAG00000010424	A1CF	98	91.017	Equus_caballus
ENSCHOG00000009089	A1CF	78	81.345	ENSEEUG00000000013	A1CF	97	82.805	Erinaceus_europaeus
ENSCHOG00000009089	A1CF	98	74.329	ENSELUG00000003159	a1cf	98	75.336	Esox_lucius
ENSCHOG00000009089	A1CF	100	87.396	ENSFCAG00000011179	A1CF	100	88.226	Felis_catus
ENSCHOG00000009089	A1CF	99	84.300	ENSFALG00000013183	A1CF	98	83.788	Ficedula_albicollis
ENSCHOG00000009089	A1CF	98	89.863	ENSFDAG00000019371	A1CF	98	89.691	Fukomys_damarensis
ENSCHOG00000009089	A1CF	86	75.000	ENSFHEG00000019652	a1cf	90	76.705	Fundulus_heteroclitus
ENSCHOG00000009089	A1CF	98	68.552	ENSGMOG00000018943	a1cf	98	68.386	Gadus_morhua
ENSCHOG00000009089	A1CF	99	83.502	ENSGALG00000003765	A1CF	99	82.997	Gallus_gallus
ENSCHOG00000009089	A1CF	98	67.899	ENSGAFG00000014868	a1cf	97	68.908	Gambusia_affinis
ENSCHOG00000009089	A1CF	98	70.882	ENSGACG00000010241	a1cf	97	71.048	Gasterosteus_aculeatus
ENSCHOG00000009089	A1CF	95	85.965	ENSGAGG00000016508	A1CF	98	85.439	Gopherus_agassizii
ENSCHOG00000009089	A1CF	99	90.365	ENSGGOG00000009670	A1CF	99	90.199	Gorilla_gorilla
ENSCHOG00000009089	A1CF	98	72.408	ENSHBUG00000021959	a1cf	98	74.415	Haplochromis_burtoni
ENSCHOG00000009089	A1CF	98	88.983	ENSHGLG00000008955	A1CF	98	88.983	Heterocephalus_glaber_female
ENSCHOG00000009089	A1CF	98	88.305	ENSHGLG00100000518	A1CF	98	88.305	Heterocephalus_glaber_male
ENSCHOG00000009089	A1CF	94	68.889	ENSHCOG00000017669	a1cf	98	69.294	Hippocampus_comes
ENSCHOG00000009089	A1CF	87	78.719	ENSIPUG00000010367	a1cf	94	78.719	Ictalurus_punctatus
ENSCHOG00000009089	A1CF	98	73.311	ENSKMAG00000006568	a1cf	98	74.300	Kryptolebias_marmoratus
ENSCHOG00000009089	A1CF	98	71.334	ENSLBEG00000020994	a1cf	96	72.803	Labrus_bergylta
ENSCHOG00000009089	A1CF	99	78.438	ENSLACG00000008061	A1CF	98	78.438	Latimeria_chalumnae
ENSCHOG00000009089	A1CF	99	76.923	ENSLOCG00000006302	a1cf	98	76.923	Lepisosteus_oculatus
ENSCHOG00000009089	A1CF	98	88.983	ENSLAFG00000015462	A1CF	98	88.983	Loxodonta_africana
ENSCHOG00000009089	A1CF	98	90.893	ENSMFAG00000035948	A1CF	98	90.893	Macaca_fascicularis
ENSCHOG00000009089	A1CF	99	90.301	ENSMMUG00000007077	A1CF	99	90.301	Macaca_mulatta
ENSCHOG00000009089	A1CF	99	90.365	ENSMNEG00000031454	A1CF	99	90.365	Macaca_nemestrina
ENSCHOG00000009089	A1CF	98	89.322	ENSMLEG00000037223	A1CF	98	89.322	Mandrillus_leucophaeus
ENSCHOG00000009089	A1CF	94	73.124	ENSMAMG00000010402	a1cf	95	75.436	Mastacembelus_armatus
ENSCHOG00000009089	A1CF	98	71.717	ENSMZEG00005013245	a1cf	97	72.391	Maylandia_zebra
ENSCHOG00000009089	A1CF	99	83.697	ENSMGAG00000001507	A1CF	98	83.193	Meleagris_gallopavo
ENSCHOG00000009089	A1CF	98	87.288	ENSMAUG00000007422	A1cf	98	87.288	Mesocricetus_auratus
ENSCHOG00000009089	A1CF	98	91.252	ENSMICG00000003377	A1CF	100	89.517	Microcebus_murinus
ENSCHOG00000009089	A1CF	98	87.458	ENSMOCG00000021536	A1cf	98	87.288	Microtus_ochrogaster
ENSCHOG00000009089	A1CF	94	68.293	ENSMMOG00000009422	a1cf	95	69.861	Mola_mola
ENSCHOG00000009089	A1CF	90	86.330	ENSMODG00000016478	A1CF	94	87.938	Monodelphis_domestica
ENSCHOG00000009089	A1CF	99	70.119	ENSMALG00000012992	a1cf	98	69.440	Monopterus_albus
ENSCHOG00000009089	A1CF	98	87.973	MGP_CAROLIEiJ_G0022873	A1cf	98	87.801	Mus_caroli
ENSCHOG00000009089	A1CF	98	87.973	ENSMUSG00000052595	A1cf	99	94.949	Mus_musculus
ENSCHOG00000009089	A1CF	98	87.650	MGP_PahariEiJ_G0014366	A1cf	98	87.113	Mus_pahari
ENSCHOG00000009089	A1CF	98	87.457	MGP_SPRETEiJ_G0023792	A1cf	98	87.285	Mus_spretus
ENSCHOG00000009089	A1CF	98	83.673	ENSMPUG00000016971	A1CF	97	83.673	Mustela_putorius_furo
ENSCHOG00000009089	A1CF	98	88.814	ENSMLUG00000016071	A1CF	98	89.492	Myotis_lucifugus
ENSCHOG00000009089	A1CF	98	89.322	ENSNGAG00000015136	A1cf	98	89.171	Nannospalax_galili
ENSCHOG00000009089	A1CF	98	72.742	ENSNBRG00000001712	a1cf	98	74.749	Neolamprologus_brichardi
ENSCHOG00000009089	A1CF	98	90.508	ENSNLEG00000012028	A1CF	98	90.339	Nomascus_leucogenys
ENSCHOG00000009089	A1CF	94	88.869	ENSMEUG00000015909	A1CF	100	88.869	Notamacropus_eugenii
ENSCHOG00000009089	A1CF	86	78.378	ENSOPRG00000010667	A1CF	94	78.311	Ochotona_princeps
ENSCHOG00000009089	A1CF	98	73.244	ENSONIG00000019105	a1cf	98	74.415	Oreochromis_niloticus
ENSCHOG00000009089	A1CF	76	85.398	ENSOANG00000007360	A1CF	96	85.398	Ornithorhynchus_anatinus
ENSCHOG00000009089	A1CF	98	90.034	ENSOCUG00000011587	A1CF	98	90.206	Oryctolagus_cuniculus
ENSCHOG00000009089	A1CF	98	70.627	ENSORLG00000013342	a1cf	97	70.132	Oryzias_latipes
ENSCHOG00000009089	A1CF	98	72.158	ENSORLG00020000586	a1cf	98	71.993	Oryzias_latipes_hni
ENSCHOG00000009089	A1CF	98	71.993	ENSORLG00015018569	a1cf	98	72.158	Oryzias_latipes_hsok
ENSCHOG00000009089	A1CF	98	73.322	ENSOMEG00000013531	a1cf	98	72.987	Oryzias_melastigma
ENSCHOG00000009089	A1CF	98	87.288	ENSOGAG00000012884	A1CF	98	87.627	Otolemur_garnettii
ENSCHOG00000009089	A1CF	98	89.661	ENSOARG00000013695	A1CF	98	89.661	Ovis_aries
ENSCHOG00000009089	A1CF	99	90.532	ENSPPAG00000028115	A1CF	99	90.365	Pan_paniscus
ENSCHOG00000009089	A1CF	100	87.894	ENSPPRG00000012180	A1CF	100	88.723	Panthera_pardus
ENSCHOG00000009089	A1CF	100	88.060	ENSPTIG00000021223	A1CF	100	88.889	Panthera_tigris_altaica
ENSCHOG00000009089	A1CF	98	91.065	ENSPTRG00000002508	A1CF	98	90.893	Pan_troglodytes
ENSCHOG00000009089	A1CF	98	90.893	ENSPANG00000021988	A1CF	98	90.893	Papio_anubis
ENSCHOG00000009089	A1CF	98	76.510	ENSPKIG00000025176	a1cf	98	76.342	Paramormyrops_kingsleyae
ENSCHOG00000009089	A1CF	99	83.106	ENSPSIG00000010318	A1CF	98	83.276	Pelodiscus_sinensis
ENSCHOG00000009089	A1CF	82	71.253	ENSPMGG00000013359	a1cf	94	67.091	Periophthalmus_magnuspinnatus
ENSCHOG00000009089	A1CF	98	88.305	ENSPEMG00000015021	A1cf	98	87.627	Peromyscus_maniculatus_bairdii
ENSCHOG00000009089	A1CF	98	85.420	ENSPCIG00000002175	A1CF	98	85.420	Phascolarctos_cinereus
ENSCHOG00000009089	A1CF	94	73.801	ENSPFOG00000007437	-	98	73.147	Poecilia_formosa
ENSCHOG00000009089	A1CF	94	73.973	ENSPFOG00000006683	a1cf	98	73.311	Poecilia_formosa
ENSCHOG00000009089	A1CF	94	74.826	ENSPLAG00000000026	a1cf	98	74.124	Poecilia_latipinna
ENSCHOG00000009089	A1CF	94	74.826	ENSPLAG00000001210	-	98	74.124	Poecilia_latipinna
ENSCHOG00000009089	A1CF	94	67.073	ENSPMEG00000000921	a1cf	97	66.667	Poecilia_mexicana
ENSCHOG00000009089	A1CF	94	66.151	ENSPMEG00000015529	-	97	65.785	Poecilia_mexicana
ENSCHOG00000009089	A1CF	94	73.973	ENSPREG00000016298	a1cf	98	73.311	Poecilia_reticulata
ENSCHOG00000009089	A1CF	98	91.753	ENSPPYG00000002819	A1CF	98	91.581	Pongo_abelii
ENSCHOG00000009089	A1CF	79	74.304	ENSPCAG00000006463	A1CF	79	74.090	Procavia_capensis
ENSCHOG00000009089	A1CF	98	89.661	ENSPCOG00000024172	A1CF	98	89.831	Propithecus_coquereli
ENSCHOG00000009089	A1CF	98	71.617	ENSPNYG00000017944	a1cf	98	73.597	Pundamilia_nyererei
ENSCHOG00000009089	A1CF	99	78.057	ENSPNAG00000007704	a1cf	99	78.057	Pygocentrus_nattereri
ENSCHOG00000009089	A1CF	98	88.144	ENSRNOG00000033195	A1cf	98	87.973	Rattus_norvegicus
ENSCHOG00000009089	A1CF	98	82.939	ENSRBIG00000042892	A1CF	100	92.475	Rhinopithecus_bieti
ENSCHOG00000009089	A1CF	94	94.245	ENSRROG00000041398	A1CF	99	94.245	Rhinopithecus_roxellana
ENSCHOG00000009089	A1CF	99	91.030	ENSSBOG00000021930	A1CF	100	94.257	Saimiri_boliviensis_boliviensis
ENSCHOG00000009089	A1CF	98	84.391	ENSSHAG00000005096	A1CF	98	84.391	Sarcophilus_harrisii
ENSCHOG00000009089	A1CF	98	77.551	ENSSFOG00015011774	a1cf	98	77.551	Scleropages_formosus
ENSCHOG00000009089	A1CF	94	73.801	ENSSMAG00000013271	a1cf	95	74.144	Scophthalmus_maximus
ENSCHOG00000009089	A1CF	99	72.287	ENSSDUG00000013930	a1cf	98	72.955	Seriola_dumerili
ENSCHOG00000009089	A1CF	99	67.508	ENSSLDG00000004290	a1cf	98	68.519	Seriola_lalandi_dorsalis
ENSCHOG00000009089	A1CF	99	81.911	ENSSARG00000005940	A1CF	99	81.911	Sorex_araneus
ENSCHOG00000009089	A1CF	98	82.462	ENSSPUG00000006797	A1CF	98	82.293	Sphenodon_punctatus
ENSCHOG00000009089	A1CF	98	89.831	ENSSSCG00000010431	A1CF	98	89.831	Sus_scrofa
ENSCHOG00000009089	A1CF	99	83.502	ENSTGUG00000005090	A1CF	98	83.502	Taeniopygia_guttata
ENSCHOG00000009089	A1CF	99	71.264	ENSTRUG00000001982	a1cf	98	70.772	Takifugu_rubripes
ENSCHOG00000009089	A1CF	94	73.675	ENSTNIG00000003580	a1cf	95	73.675	Tetraodon_nigroviridis
ENSCHOG00000009089	A1CF	100	85.546	ENSTTRG00000013190	A1CF	100	85.546	Tursiops_truncatus
ENSCHOG00000009089	A1CF	98	90.893	ENSUAMG00000020065	A1CF	98	90.893	Ursus_americanus
ENSCHOG00000009089	A1CF	98	89.153	ENSUMAG00000011162	A1CF	98	92.077	Ursus_maritimus
ENSCHOG00000009089	A1CF	86	90.253	ENSVPAG00000006130	A1CF	99	80.405	Vicugna_pacos
ENSCHOG00000009089	A1CF	98	90.550	ENSVVUG00000002504	A1CF	98	90.550	Vulpes_vulpes
ENSCHOG00000009089	A1CF	98	73.109	ENSXETG00000006611	a1cf	98	72.941	Xenopus_tropicalis
ENSCHOG00000009089	A1CF	98	74.286	ENSXCOG00000003302	a1cf	98	75.294	Xiphophorus_couchianus
ENSCHOG00000009089	A1CF	98	73.300	ENSXMAG00000016703	a1cf	98	74.295	Xiphophorus_maculatus