EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000009123 (Gene tree)
Gene ID: -
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 19918 bases
Position: chrGeneScaffold_1219:459-20376
Accession: 26935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000008069	RtcB	PF01139.17	7e-106	1	2
ENSCHOP00000008069	RtcB	PF01139.17	7e-106	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000009147	RTCB-201	1512	-	ENSCHOP00000008069	503 (aa)	-	UPI0001FA0084

Gene Model

Click here to download ENSCHOG00000009123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000009123's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000009123	RTCB	100	85.149	ENSG00000100220	RTCB	100	85.149	Homo_sapiens
ENSCHOG00000009123	RTCB	100	80.792	ENSAPOG00000006040	rtcb	100	80.792	Acanthochromis_polyacanthus
ENSCHOG00000009123	RTCB	100	85.149	ENSAMEG00000016152	RTCB	100	85.149	Ailuropoda_melanoleuca
ENSCHOG00000009123	RTCB	100	77.336	ENSACIG00000009083	rtcb	100	77.336	Amphilophus_citrinellus
ENSCHOG00000009123	RTCB	100	80.990	ENSAOCG00000005662	rtcb	100	80.990	Amphiprion_ocellaris
ENSCHOG00000009123	RTCB	96	75.565	ENSAPEG00000024653	rtcb	100	75.565	Amphiprion_percula
ENSCHOG00000009123	RTCB	100	80.990	ENSAPEG00000024701	rtcb	100	80.990	Amphiprion_percula
ENSCHOG00000009123	RTCB	100	81.188	ENSATEG00000000618	rtcb	100	81.188	Anabas_testudineus
ENSCHOG00000009123	RTCB	100	79.961	ENSACAG00000014817	RTCB	100	79.961	Anolis_carolinensis
ENSCHOG00000009123	RTCB	100	70.495	ENSANAG00000018191	-	91	70.495	Aotus_nancymaae
ENSCHOG00000009123	RTCB	72	97.222	ENSANAG00000023724	-	100	50.000	Aotus_nancymaae
ENSCHOG00000009123	RTCB	100	79.406	ENSACLG00000008367	rtcb	100	79.406	Astatotilapia_calliptera
ENSCHOG00000009123	RTCB	100	80.396	ENSAMXG00000042320	rtcb	100	80.396	Astyanax_mexicanus
ENSCHOG00000009123	RTCB	100	84.752	ENSBTAG00000011070	RTCB	100	84.752	Bos_taurus
ENSCHOG00000009123	RTCB	100	61.386	WBGene00008877	rtcb-1	100	61.386	Caenorhabditis_elegans
ENSCHOG00000009123	RTCB	100	85.149	ENSCJAG00000006128	RTCB	100	85.149	Callithrix_jacchus
ENSCHOG00000009123	RTCB	100	81.386	ENSCAFG00000010789	-	100	81.386	Canis_familiaris
ENSCHOG00000009123	RTCB	100	85.149	ENSCAFG00000001785	RTCB	100	85.149	Canis_familiaris
ENSCHOG00000009123	RTCB	87	80.000	ENSCAFG00020018953	-	99	80.000	Canis_lupus_dingo
ENSCHOG00000009123	RTCB	100	85.149	ENSCAFG00020004890	-	100	85.149	Canis_lupus_dingo
ENSCHOG00000009123	RTCB	100	84.950	ENSCHIG00000027009	-	100	84.950	Capra_hircus
ENSCHOG00000009123	RTCB	100	84.752	ENSTSYG00000012320	RTCB	100	84.752	Carlito_syrichta
ENSCHOG00000009123	RTCB	94	83.648	ENSCAPG00000011647	RTCB	96	83.648	Cavia_aperea
ENSCHOG00000009123	RTCB	100	85.149	ENSCCAG00000000618	RTCB	100	85.149	Cebus_capucinus
ENSCHOG00000009123	RTCB	100	85.149	ENSCATG00000033424	RTCB	100	85.149	Cercocebus_atys
ENSCHOG00000009123	RTCB	100	84.752	ENSCLAG00000007997	RTCB	100	84.752	Chinchilla_lanigera
ENSCHOG00000009123	RTCB	100	85.347	ENSCSAG00000008351	RTCB	100	85.347	Chlorocebus_sabaeus
ENSCHOG00000009123	RTCB	100	81.980	ENSCPBG00000023184	RTCB	100	81.980	Chrysemys_picta_bellii
ENSCHOG00000009123	RTCB	100	69.307	ENSCING00000003830	-	100	69.307	Ciona_intestinalis
ENSCHOG00000009123	RTCB	100	69.703	ENSCSAVG00000008124	-	99	69.703	Ciona_savignyi
ENSCHOG00000009123	RTCB	100	81.386	ENSCANG00000001891	RTCB	100	81.386	Colobus_angolensis_palliatus
ENSCHOG00000009123	RTCB	100	84.554	ENSCGRG00001011173	Rtcb	100	84.554	Cricetulus_griseus_chok1gshd
ENSCHOG00000009123	RTCB	93	83.864	ENSCGRG00000009587	-	96	83.864	Cricetulus_griseus_crigri
ENSCHOG00000009123	RTCB	100	80.792	ENSCSEG00000003986	rtcb	100	80.792	Cynoglossus_semilaevis
ENSCHOG00000009123	RTCB	82	76.923	ENSCVAG00000000569	rtcb	95	76.923	Cyprinodon_variegatus
ENSCHOG00000009123	RTCB	100	80.198	ENSDARG00000101047	rtcb	100	80.198	Danio_rerio
ENSCHOG00000009123	RTCB	80	79.361	ENSDNOG00000012425	RTCB	99	79.361	Dasypus_novemcinctus
ENSCHOG00000009123	RTCB	100	84.356	ENSDORG00000010855	Rtcb	100	84.356	Dipodomys_ordii
ENSCHOG00000009123	RTCB	99	72.565	FBgn0032781	RtcB	99	72.565	Drosophila_melanogaster
ENSCHOG00000009123	RTCB	100	78.416	ENSETEG00000001988	RTCB	100	78.416	Echinops_telfairi
ENSCHOG00000009123	RTCB	100	72.277	ENSEBUG00000014235	rtcb	100	72.277	Eptatretus_burgeri
ENSCHOG00000009123	RTCB	100	84.950	ENSEASG00005019059	RTCB	100	84.950	Equus_asinus_asinus
ENSCHOG00000009123	RTCB	100	84.950	ENSECAG00000023998	RTCB	100	84.950	Equus_caballus
ENSCHOG00000009123	RTCB	88	73.826	ENSEEUG00000006251	RTCB	100	73.826	Erinaceus_europaeus
ENSCHOG00000009123	RTCB	100	69.376	ENSELUG00000009275	rtcb	100	69.376	Esox_lucius
ENSCHOG00000009123	RTCB	100	85.149	ENSFCAG00000026480	RTCB	100	85.149	Felis_catus
ENSCHOG00000009123	RTCB	100	83.168	ENSFALG00000013334	RTCB	100	83.168	Ficedula_albicollis
ENSCHOG00000009123	RTCB	100	84.950	ENSFDAG00000018150	RTCB	100	84.950	Fukomys_damarensis
ENSCHOG00000009123	RTCB	100	80.990	ENSFHEG00000009595	rtcb	100	80.990	Fundulus_heteroclitus
ENSCHOG00000009123	RTCB	100	78.218	ENSGMOG00000018882	rtcb	100	78.218	Gadus_morhua
ENSCHOG00000009123	RTCB	100	82.772	ENSGALG00000012611	RTCB	100	82.772	Gallus_gallus
ENSCHOG00000009123	RTCB	100	80.990	ENSGAFG00000004198	rtcb	100	80.990	Gambusia_affinis
ENSCHOG00000009123	RTCB	100	79.802	ENSGACG00000000586	rtcb	100	79.802	Gasterosteus_aculeatus
ENSCHOG00000009123	RTCB	93	80.426	ENSGAGG00000019133	RTCB	98	80.426	Gopherus_agassizii
ENSCHOG00000009123	RTCB	100	85.149	ENSGGOG00000011402	RTCB	100	85.149	Gorilla_gorilla
ENSCHOG00000009123	RTCB	100	79.406	ENSHBUG00000020571	rtcb	100	79.406	Haplochromis_burtoni
ENSCHOG00000009123	RTCB	100	84.950	ENSHGLG00000004492	RTCB	100	84.950	Heterocephalus_glaber_female
ENSCHOG00000009123	RTCB	93	56.290	ENSHGLG00000001066	-	99	56.290	Heterocephalus_glaber_female
ENSCHOG00000009123	RTCB	100	84.950	ENSHGLG00100008965	RTCB	100	84.950	Heterocephalus_glaber_male
ENSCHOG00000009123	RTCB	100	78.107	ENSHCOG00000006450	rtcb	100	78.107	Hippocampus_comes
ENSCHOG00000009123	RTCB	100	80.198	ENSIPUG00000015443	rtcb	100	80.198	Ictalurus_punctatus
ENSCHOG00000009123	RTCB	100	85.347	ENSSTOG00000003878	RTCB	100	85.347	Ictidomys_tridecemlineatus
ENSCHOG00000009123	RTCB	100	84.356	ENSJJAG00000010667	Rtcb	100	84.356	Jaculus_jaculus
ENSCHOG00000009123	RTCB	100	80.594	ENSKMAG00000013178	rtcb	100	80.594	Kryptolebias_marmoratus
ENSCHOG00000009123	RTCB	100	81.188	ENSLBEG00000010566	RTCB	100	81.188	Labrus_bergylta
ENSCHOG00000009123	RTCB	100	80.198	ENSLBEG00000000214	rtcb	100	80.198	Labrus_bergylta
ENSCHOG00000009123	RTCB	100	80.990	ENSLACG00000013033	RTCB	100	80.990	Latimeria_chalumnae
ENSCHOG00000009123	RTCB	100	80.396	ENSLOCG00000016515	rtcb	99	80.396	Lepisosteus_oculatus
ENSCHOG00000009123	RTCB	100	84.554	ENSLAFG00000002082	RTCB	100	84.554	Loxodonta_africana
ENSCHOG00000009123	RTCB	100	85.347	ENSMFAG00000034419	RTCB	100	85.347	Macaca_fascicularis
ENSCHOG00000009123	RTCB	100	85.347	ENSMMUG00000006720	RTCB	100	85.347	Macaca_mulatta
ENSCHOG00000009123	RTCB	100	85.347	ENSMNEG00000040669	RTCB	100	85.347	Macaca_nemestrina
ENSCHOG00000009123	RTCB	100	85.149	ENSMLEG00000040505	RTCB	100	85.149	Mandrillus_leucophaeus
ENSCHOG00000009123	RTCB	100	80.594	ENSMAMG00000020676	rtcb	100	80.594	Mastacembelus_armatus
ENSCHOG00000009123	RTCB	100	79.406	ENSMZEG00005018942	rtcb	100	79.406	Maylandia_zebra
ENSCHOG00000009123	RTCB	89	94.395	ENSMGAG00000012805	RTCB	89	94.395	Meleagris_gallopavo
ENSCHOG00000009123	RTCB	59	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSCHOG00000009123	RTCB	100	85.347	ENSMICG00000013303	-	100	85.347	Microcebus_murinus
ENSCHOG00000009123	RTCB	89	80.119	ENSMICG00000036677	-	93	80.119	Microcebus_murinus
ENSCHOG00000009123	RTCB	100	84.554	ENSMOCG00000002440	Rtcb	100	84.554	Microtus_ochrogaster
ENSCHOG00000009123	RTCB	100	80.990	ENSMMOG00000005987	rtcb	100	80.990	Mola_mola
ENSCHOG00000009123	RTCB	100	83.564	ENSMODG00000001414	RTCB	100	83.564	Monodelphis_domestica
ENSCHOG00000009123	RTCB	100	81.386	ENSMALG00000007603	rtcb	100	81.386	Monopterus_albus
ENSCHOG00000009123	RTCB	100	84.950	MGP_CAROLIEiJ_G0015689	Rtcb	100	84.950	Mus_caroli
ENSCHOG00000009123	RTCB	100	84.950	ENSMUSG00000001783	Rtcb	100	84.950	Mus_musculus
ENSCHOG00000009123	RTCB	100	84.950	MGP_PahariEiJ_G0031396	Rtcb	100	84.950	Mus_pahari
ENSCHOG00000009123	RTCB	100	84.950	MGP_SPRETEiJ_G0016507	Rtcb	100	84.950	Mus_spretus
ENSCHOG00000009123	RTCB	100	85.149	ENSMPUG00000012285	RTCB	100	85.149	Mustela_putorius_furo
ENSCHOG00000009123	RTCB	100	82.643	ENSMLUG00000007803	RTCB	100	82.643	Myotis_lucifugus
ENSCHOG00000009123	RTCB	77	79.798	ENSNGAG00000005093	Rtcb	100	79.798	Nannospalax_galili
ENSCHOG00000009123	RTCB	100	79.604	ENSNBRG00000017202	rtcb	100	79.604	Neolamprologus_brichardi
ENSCHOG00000009123	RTCB	100	85.149	ENSNLEG00000004960	RTCB	100	85.149	Nomascus_leucogenys
ENSCHOG00000009123	RTCB	79	91.228	ENSMEUG00000007809	-	78	91.228	Notamacropus_eugenii
ENSCHOG00000009123	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSCHOG00000009123	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSCHOG00000009123	RTCB	89	66.667	ENSODEG00000005042	-	93	66.667	Octodon_degus
ENSCHOG00000009123	RTCB	100	80.594	ENSONIG00000007474	rtcb	100	80.594	Oreochromis_niloticus
ENSCHOG00000009123	RTCB	100	83.564	ENSOANG00000005524	RTCB	100	83.564	Ornithorhynchus_anatinus
ENSCHOG00000009123	RTCB	93	83.830	ENSOCUG00000008270	RTCB	96	83.830	Oryctolagus_cuniculus
ENSCHOG00000009123	RTCB	100	80.198	ENSORLG00000020093	rtcb	100	80.198	Oryzias_latipes
ENSCHOG00000009123	RTCB	100	80.000	ENSORLG00020003706	rtcb	100	80.000	Oryzias_latipes_hni
ENSCHOG00000009123	RTCB	100	80.198	ENSORLG00015002968	rtcb	100	80.198	Oryzias_latipes_hsok
ENSCHOG00000009123	RTCB	100	79.802	ENSOMEG00000021278	rtcb	100	79.802	Oryzias_melastigma
ENSCHOG00000009123	RTCB	100	84.752	ENSOGAG00000001425	RTCB	100	84.752	Otolemur_garnettii
ENSCHOG00000009123	RTCB	100	84.950	ENSOARG00000018008	RTCB	100	84.950	Ovis_aries
ENSCHOG00000009123	RTCB	100	85.149	ENSPPAG00000028667	RTCB	100	85.149	Pan_paniscus
ENSCHOG00000009123	RTCB	100	85.149	ENSPPRG00000004038	RTCB	100	85.149	Panthera_pardus
ENSCHOG00000009123	RTCB	94	80.842	ENSPTIG00000020499	RTCB	97	80.842	Panthera_tigris_altaica
ENSCHOG00000009123	RTCB	100	85.149	ENSPTRG00000014287	RTCB	100	85.149	Pan_troglodytes
ENSCHOG00000009123	RTCB	100	85.347	ENSPANG00000016035	RTCB	100	85.347	Papio_anubis
ENSCHOG00000009123	RTCB	100	79.010	ENSPKIG00000001881	rtcb	100	79.010	Paramormyrops_kingsleyae
ENSCHOG00000009123	RTCB	91	82.391	ENSPSIG00000011690	RTCB	100	82.391	Pelodiscus_sinensis
ENSCHOG00000009123	RTCB	100	80.990	ENSPMGG00000016672	rtcb	100	80.990	Periophthalmus_magnuspinnatus
ENSCHOG00000009123	RTCB	100	84.950	ENSPEMG00000019548	Rtcb	100	84.950	Peromyscus_maniculatus_bairdii
ENSCHOG00000009123	RTCB	100	77.822	ENSPMAG00000005657	rtcb	100	77.822	Petromyzon_marinus
ENSCHOG00000009123	RTCB	100	83.960	ENSPCIG00000009467	RTCB	100	83.960	Phascolarctos_cinereus
ENSCHOG00000009123	RTCB	100	81.386	ENSPFOG00000003058	rtcb	100	81.386	Poecilia_formosa
ENSCHOG00000009123	RTCB	100	81.188	ENSPLAG00000017663	rtcb	100	81.188	Poecilia_latipinna
ENSCHOG00000009123	RTCB	100	81.386	ENSPMEG00000006227	rtcb	100	81.386	Poecilia_mexicana
ENSCHOG00000009123	RTCB	100	81.188	ENSPREG00000018467	rtcb	100	81.188	Poecilia_reticulata
ENSCHOG00000009123	RTCB	100	85.149	ENSPPYG00000011752	RTCB	100	85.149	Pongo_abelii
ENSCHOG00000009123	RTCB	70	90.265	ENSPCAG00000013641	RTCB	76	90.265	Procavia_capensis
ENSCHOG00000009123	RTCB	100	85.149	ENSPCOG00000017243	RTCB	100	85.149	Propithecus_coquereli
ENSCHOG00000009123	RTCB	93	83.830	ENSPVAG00000002380	RTCB	100	83.830	Pteropus_vampyrus
ENSCHOG00000009123	RTCB	100	79.406	ENSPNYG00000022760	rtcb	100	79.406	Pundamilia_nyererei
ENSCHOG00000009123	RTCB	100	80.792	ENSPNAG00000009209	rtcb	100	80.792	Pygocentrus_nattereri
ENSCHOG00000009123	RTCB	100	84.950	ENSRNOG00000004813	Rtcb	100	84.950	Rattus_norvegicus
ENSCHOG00000009123	RTCB	89	95.549	ENSRBIG00000042090	RTCB	93	95.549	Rhinopithecus_bieti
ENSCHOG00000009123	RTCB	100	80.990	ENSSBOG00000020085	-	100	80.990	Saimiri_boliviensis_boliviensis
ENSCHOG00000009123	RTCB	94	83.966	ENSSHAG00000016277	RTCB	100	83.966	Sarcophilus_harrisii
ENSCHOG00000009123	RTCB	100	79.802	ENSSFOG00015011572	RTCB	100	79.802	Scleropages_formosus
ENSCHOG00000009123	RTCB	100	79.208	ENSSFOG00015000763	rtcb	100	79.208	Scleropages_formosus
ENSCHOG00000009123	RTCB	100	77.228	ENSSMAG00000005096	rtcb	100	77.228	Scophthalmus_maximus
ENSCHOG00000009123	RTCB	100	80.396	ENSSDUG00000012605	rtcb	100	80.396	Seriola_dumerili
ENSCHOG00000009123	RTCB	100	80.396	ENSSLDG00000019458	rtcb	100	80.396	Seriola_lalandi_dorsalis
ENSCHOG00000009123	RTCB	100	82.376	ENSSPUG00000012814	RTCB	100	82.376	Sphenodon_punctatus
ENSCHOG00000009123	RTCB	100	80.990	ENSSPAG00000004623	rtcb	100	80.990	Stegastes_partitus
ENSCHOG00000009123	RTCB	100	85.149	ENSSSCG00000000158	RTCB	100	85.149	Sus_scrofa
ENSCHOG00000009123	RTCB	100	83.168	ENSTGUG00000010947	RTCB	99	83.168	Taeniopygia_guttata
ENSCHOG00000009123	RTCB	91	80.217	ENSTRUG00000009880	rtcb	100	80.217	Takifugu_rubripes
ENSCHOG00000009123	RTCB	100	79.406	ENSTNIG00000002484	rtcb	100	79.406	Tetraodon_nigroviridis
ENSCHOG00000009123	RTCB	100	71.485	ENSTBEG00000004418	RTCB	100	71.485	Tupaia_belangeri
ENSCHOG00000009123	RTCB	93	83.404	ENSTTRG00000006417	RTCB	100	83.404	Tursiops_truncatus
ENSCHOG00000009123	RTCB	100	85.149	ENSUAMG00000022792	RTCB	100	85.149	Ursus_americanus
ENSCHOG00000009123	RTCB	100	85.149	ENSUMAG00000017225	RTCB	100	85.149	Ursus_maritimus
ENSCHOG00000009123	RTCB	100	84.950	ENSVPAG00000005375	RTCB	100	84.950	Vicugna_pacos
ENSCHOG00000009123	RTCB	100	85.149	ENSVVUG00000023408	RTCB	100	85.149	Vulpes_vulpes
ENSCHOG00000009123	RTCB	100	80.594	ENSXETG00000011523	rtcb	100	80.594	Xenopus_tropicalis
ENSCHOG00000009123	RTCB	100	81.386	ENSXMAG00000002855	rtcb	100	81.386	Xiphophorus_maculatus