EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000009374 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 52575 bases
Position: chrGeneScaffold_2392:1281-53855
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000008305	Ago_hook	PF10427.9	6.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000009406	TNRC6A-201	5886	-	ENSCHOP00000008305	1961 (aa)	-	UPI0001F9FE76

Gene Model

Click here to download ENSCHOG00000009374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000009374's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000009374	TNRC6A	95	91.627	ENSG00000090905	TNRC6A	100	95.000	Homo_sapiens
ENSCHOG00000009374	TNRC6A	92	91.763	ENSAMEG00000009333	TNRC6A	95	91.763	Ailuropoda_melanoleuca
ENSCHOG00000009374	TNRC6A	92	80.149	ENSAPLG00000009978	TNRC6A	95	80.149	Anas_platyrhynchos
ENSCHOG00000009374	TNRC6A	88	54.194	ENSACAG00000011857	TNRC6A	94	56.120	Anolis_carolinensis
ENSCHOG00000009374	TNRC6A	95	91.899	ENSANAG00000025252	TNRC6A	95	91.899	Aotus_nancymaae
ENSCHOG00000009374	TNRC6A	83	77.841	ENSAMXG00000019919	tnrc6a	92	77.841	Astyanax_mexicanus
ENSCHOG00000009374	TNRC6A	92	90.946	ENSBTAG00000017999	TNRC6A	94	90.470	Bos_taurus
ENSCHOG00000009374	TNRC6A	95	91.763	ENSCJAG00000020677	TNRC6A	95	91.763	Callithrix_jacchus
ENSCHOG00000009374	TNRC6A	95	91.763	ENSCAFG00000017531	TNRC6A	95	91.763	Canis_familiaris
ENSCHOG00000009374	TNRC6A	92	90.334	ENSCAFG00020021160	TNRC6A	94	90.265	Canis_lupus_dingo
ENSCHOG00000009374	TNRC6A	95	87.747	ENSCHIG00000019448	TNRC6A	95	87.338	Capra_hircus
ENSCHOG00000009374	TNRC6A	95	91.831	ENSTSYG00000012711	TNRC6A	95	91.831	Carlito_syrichta
ENSCHOG00000009374	TNRC6A	94	88.291	ENSCPOG00000036684	TNRC6A	95	88.359	Cavia_porcellus
ENSCHOG00000009374	TNRC6A	95	91.831	ENSCCAG00000033664	TNRC6A	95	91.831	Cebus_capucinus
ENSCHOG00000009374	TNRC6A	92	90.780	ENSCATG00000019284	TNRC6A	92	90.780	Cercocebus_atys
ENSCHOG00000009374	TNRC6A	95	83.867	ENSCLAG00000010217	TNRC6A	95	83.935	Chinchilla_lanigera
ENSCHOG00000009374	TNRC6A	95	91.763	ENSCSAG00000006561	TNRC6A	95	91.763	Chlorocebus_sabaeus
ENSCHOG00000009374	TNRC6A	85	75.815	ENSCPBG00000001881	TNRC6A	94	75.832	Chrysemys_picta_bellii
ENSCHOG00000009374	TNRC6A	95	91.763	ENSCANG00000041549	TNRC6A	95	91.763	Colobus_angolensis_palliatus
ENSCHOG00000009374	TNRC6A	92	89.796	ENSCGRG00001015021	Tnrc6a	95	89.592	Cricetulus_griseus_chok1gshd
ENSCHOG00000009374	TNRC6A	94	85.782	ENSCGRG00000013351	Tnrc6a	95	85.646	Cricetulus_griseus_crigri
ENSCHOG00000009374	TNRC6A	83	78.917	ENSDARG00000079688	tnrc6a	91	78.917	Danio_rerio
ENSCHOG00000009374	TNRC6A	92	91.642	ENSDNOG00000013989	TNRC6A	94	91.045	Dasypus_novemcinctus
ENSCHOG00000009374	TNRC6A	87	94.017	ENSETEG00000014658	TNRC6A	89	94.017	Echinops_telfairi
ENSCHOG00000009374	TNRC6A	95	91.156	ENSEASG00005017693	TNRC6A	95	91.293	Equus_asinus_asinus
ENSCHOG00000009374	TNRC6A	95	91.088	ENSECAG00000025056	TNRC6A	94	92.262	Equus_caballus
ENSCHOG00000009374	TNRC6A	92	84.286	ENSEEUG00000004530	TNRC6A	94	84.286	Erinaceus_europaeus
ENSCHOG00000009374	TNRC6A	95	90.742	ENSFCAG00000025236	TNRC6A	95	90.742	Felis_catus
ENSCHOG00000009374	TNRC6A	95	78.102	ENSFALG00000003757	TNRC6A	95	78.630	Ficedula_albicollis
ENSCHOG00000009374	TNRC6A	86	76.475	ENSGALG00000006068	TNRC6A	94	76.558	Gallus_gallus
ENSCHOG00000009374	TNRC6A	85	75.829	ENSGAGG00000023209	TNRC6A	94	75.829	Gopherus_agassizii
ENSCHOG00000009374	TNRC6A	92	91.627	ENSGGOG00000005137	TNRC6A	94	91.627	Gorilla_gorilla
ENSCHOG00000009374	TNRC6A	94	86.521	ENSHGLG00000012474	-	95	86.521	Heterocephalus_glaber_female
ENSCHOG00000009374	TNRC6A	89	79.273	ENSHGLG00000007368	-	88	79.273	Heterocephalus_glaber_female
ENSCHOG00000009374	TNRC6A	94	86.416	ENSHGLG00100012496	-	95	86.416	Heterocephalus_glaber_male
ENSCHOG00000009374	TNRC6A	95	91.287	ENSSTOG00000023394	TNRC6A	94	91.287	Ictidomys_tridecemlineatus
ENSCHOG00000009374	TNRC6A	92	67.805	ENSLACG00000006277	TNRC6A	95	68.474	Latimeria_chalumnae
ENSCHOG00000009374	TNRC6A	89	84.615	ENSLOCG00000005517	tnrc6a	87	84.375	Lepisosteus_oculatus
ENSCHOG00000009374	TNRC6A	92	90.149	ENSLAFG00000004209	TNRC6A	95	90.448	Loxodonta_africana
ENSCHOG00000009374	TNRC6A	92	90.780	ENSMFAG00000003824	TNRC6A	94	90.780	Macaca_fascicularis
ENSCHOG00000009374	TNRC6A	95	91.695	ENSMMUG00000020428	TNRC6A	95	91.695	Macaca_mulatta
ENSCHOG00000009374	TNRC6A	95	91.627	ENSMNEG00000034854	TNRC6A	95	91.627	Macaca_nemestrina
ENSCHOG00000009374	TNRC6A	92	90.712	ENSMLEG00000042737	TNRC6A	92	90.712	Mandrillus_leucophaeus
ENSCHOG00000009374	TNRC6A	92	94.034	ENSMGAG00000006455	TNRC6A	86	94.034	Meleagris_gallopavo
ENSCHOG00000009374	TNRC6A	95	86.667	ENSMAUG00000012750	Tnrc6a	95	86.531	Mesocricetus_auratus
ENSCHOG00000009374	TNRC6A	95	92.580	ENSMICG00000030685	TNRC6A	95	92.580	Microcebus_murinus
ENSCHOG00000009374	TNRC6A	95	87.474	ENSMOCG00000000152	Tnrc6a	95	87.270	Microtus_ochrogaster
ENSCHOG00000009374	TNRC6A	95	80.816	ENSMODG00000016348	TNRC6A	94	81.016	Monodelphis_domestica
ENSCHOG00000009374	TNRC6A	92	85.705	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	88.492	Mus_caroli
ENSCHOG00000009374	TNRC6A	95	86.113	ENSMUSG00000052707	Tnrc6a	99	88.921	Mus_musculus
ENSCHOG00000009374	TNRC6A	92	86.453	MGP_PahariEiJ_G0013635	Tnrc6a	100	89.350	Mus_pahari
ENSCHOG00000009374	TNRC6A	95	89.449	MGP_SPRETEiJ_G0031539	Tnrc6a	100	88.921	Mus_spretus
ENSCHOG00000009374	TNRC6A	86	99.430	ENSMPUG00000012324	TNRC6A	90	99.430	Mustela_putorius_furo
ENSCHOG00000009374	TNRC6A	92	89.381	ENSMLUG00000002701	TNRC6A	95	89.381	Myotis_lucifugus
ENSCHOG00000009374	TNRC6A	94	88.095	ENSNGAG00000020702	Tnrc6a	95	88.163	Nannospalax_galili
ENSCHOG00000009374	TNRC6A	92	89.378	ENSNLEG00000011851	TNRC6A	94	89.310	Nomascus_leucogenys
ENSCHOG00000009374	TNRC6A	77	81.617	ENSMEUG00000015959	-	77	81.617	Notamacropus_eugenii
ENSCHOG00000009374	TNRC6A	88	99.254	ENSOPRG00000005819	TNRC6A	88	99.254	Ochotona_princeps
ENSCHOG00000009374	TNRC6A	92	82.665	ENSODEG00000012802	TNRC6A	93	83.784	Octodon_degus
ENSCHOG00000009374	TNRC6A	82	78.908	ENSOANG00000007672	TNRC6A	95	78.908	Ornithorhynchus_anatinus
ENSCHOG00000009374	TNRC6A	92	90.816	ENSOCUG00000004325	TNRC6A	95	90.816	Oryctolagus_cuniculus
ENSCHOG00000009374	TNRC6A	92	91.842	ENSOGAG00000006666	TNRC6A	93	91.988	Otolemur_garnettii
ENSCHOG00000009374	TNRC6A	92	91.186	ENSOARG00000017950	TNRC6A	93	90.712	Ovis_aries
ENSCHOG00000009374	TNRC6A	94	91.695	ENSPPAG00000028379	TNRC6A	95	91.695	Pan_paniscus
ENSCHOG00000009374	TNRC6A	95	90.742	ENSPPRG00000005861	TNRC6A	95	90.742	Panthera_pardus
ENSCHOG00000009374	TNRC6A	94	90.674	ENSPTIG00000006346	TNRC6A	95	90.674	Panthera_tigris_altaica
ENSCHOG00000009374	TNRC6A	92	91.627	ENSPTRG00000007898	TNRC6A	94	91.627	Pan_troglodytes
ENSCHOG00000009374	TNRC6A	87	99.671	ENSPANG00000018523	TNRC6A	90	99.671	Papio_anubis
ENSCHOG00000009374	TNRC6A	79	87.952	ENSPKIG00000012859	tnrc6a	88	87.952	Paramormyrops_kingsleyae
ENSCHOG00000009374	TNRC6A	70	92.810	ENSPSIG00000003965	TNRC6A	93	92.810	Pelodiscus_sinensis
ENSCHOG00000009374	TNRC6A	94	86.521	ENSPEMG00000016318	Tnrc6a	95	86.317	Peromyscus_maniculatus_bairdii
ENSCHOG00000009374	TNRC6A	92	82.653	ENSPCIG00000012106	TNRC6A	95	82.721	Phascolarctos_cinereus
ENSCHOG00000009374	TNRC6A	94	91.559	ENSPPYG00000007202	TNRC6A	95	91.559	Pongo_abelii
ENSCHOG00000009374	TNRC6A	90	98.969	ENSPCAG00000008260	TNRC6A	90	98.969	Procavia_capensis
ENSCHOG00000009374	TNRC6A	90	99.715	ENSPCOG00000010134	TNRC6A	92	99.715	Propithecus_coquereli
ENSCHOG00000009374	TNRC6A	84	69.475	ENSPVAG00000012066	TNRC6A	95	69.555	Pteropus_vampyrus
ENSCHOG00000009374	TNRC6A	95	85.986	ENSRNOG00000024737	Tnrc6a	93	88.866	Rattus_norvegicus
ENSCHOG00000009374	TNRC6A	92	91.763	ENSRBIG00000014222	TNRC6A	94	91.763	Rhinopithecus_bieti
ENSCHOG00000009374	TNRC6A	95	91.763	ENSRROG00000032360	TNRC6A	95	91.763	Rhinopithecus_roxellana
ENSCHOG00000009374	TNRC6A	92	91.831	ENSSBOG00000036197	TNRC6A	95	91.892	Saimiri_boliviensis_boliviensis
ENSCHOG00000009374	TNRC6A	86	78.075	ENSSHAG00000008811	TNRC6A	89	86.957	Sarcophilus_harrisii
ENSCHOG00000009374	TNRC6A	83	83.476	ENSSFOG00015008920	tnrc6a	91	83.476	Scleropages_formosus
ENSCHOG00000009374	TNRC6A	61	86.154	ENSSARG00000002479	TNRC6A	77	86.593	Sorex_araneus
ENSCHOG00000009374	TNRC6A	85	74.764	ENSSPUG00000010525	TNRC6A	95	75.152	Sphenodon_punctatus
ENSCHOG00000009374	TNRC6A	95	88.019	ENSSSCG00000038870	TNRC6A	95	92.568	Sus_scrofa
ENSCHOG00000009374	TNRC6A	94	75.560	ENSTGUG00000006142	TNRC6A	95	75.577	Taeniopygia_guttata
ENSCHOG00000009374	TNRC6A	87	98.860	ENSTBEG00000014965	TNRC6A	90	98.860	Tupaia_belangeri
ENSCHOG00000009374	TNRC6A	89	93.062	ENSTTRG00000002008	TNRC6A	89	91.148	Tursiops_truncatus
ENSCHOG00000009374	TNRC6A	71	90.476	ENSUAMG00000006656	-	84	90.179	Ursus_americanus
ENSCHOG00000009374	TNRC6A	92	91.967	ENSUMAG00000008274	TNRC6A	95	91.892	Ursus_maritimus
ENSCHOG00000009374	TNRC6A	54	82.716	ENSVPAG00000010764	-	55	82.099	Vicugna_pacos
ENSCHOG00000009374	TNRC6A	87	99.459	ENSVVUG00000005380	TNRC6A	95	91.627	Vulpes_vulpes
ENSCHOG00000009374	TNRC6A	89	63.857	ENSXETG00000030437	TNRC6A	94	64.734	Xenopus_tropicalis