EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCHOG00000009392 (Gene tree)
Gene ID
-
Gene Symbol
SNRPF
Alias
Sm-F
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Choloepus_hoffmanni
Status
putative
Strand
Plus strand
Length
5449 bases
Position
chrscaffold_61276:4282-9730
Accession
11162
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHOP00000008306LSMPF01423.223.5e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHOT00000009407SNRPF-201192-ENSCHOP0000000830664 (aa)-UPI0001774E28
Gene Model
Click here to download ENSCHOG00000009392's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000009392's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCHOG00000009392SNRPF8345.283ENSCHOG00000003420LSM68445.283
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHOG00000009392SNRPF100100.000ENSG00000139343SNRPF74100.000Homo_sapiens
ENSCHOG00000009392SNRPF98100.000ENSAMEG00000002166-74100.000Ailuropoda_melanoleuca
ENSCHOG00000009392SNRPF10089.062ENSAMEG00000018718-7489.062Ailuropoda_melanoleuca
ENSCHOG00000009392SNRPF9796.774ENSACIG00000013216snrpf7396.774Amphilophus_citrinellus
ENSCHOG00000009392SNRPF9796.774ENSAOCG00000015108snrpf7396.774Amphiprion_ocellaris
ENSCHOG00000009392SNRPF9796.774ENSAPEG00000022022snrpf7396.774Amphiprion_percula
ENSCHOG00000009392SNRPF9796.774ENSATEG00000022625snrpf6796.774Anabas_testudineus
ENSCHOG00000009392SNRPF9898.413ENSACAG00000014073SNRPF7298.413Anolis_carolinensis
ENSCHOG00000009392SNRPF10068.750ENSANAG00000025860-6968.750Aotus_nancymaae
ENSCHOG00000009392SNRPF9490.000ENSANAG00000020297-5590.000Aotus_nancymaae
ENSCHOG00000009392SNRPF100100.000ENSANAG00000032845SNRPF74100.000Aotus_nancymaae
ENSCHOG00000009392SNRPF9796.774ENSACLG00000016066snrpf7396.774Astatotilapia_calliptera
ENSCHOG00000009392SNRPF10095.312ENSAMXG00000007421snrpf7595.312Astyanax_mexicanus
ENSCHOG00000009392SNRPF10093.750ENSBTAG00000050012-7993.750Bos_taurus
ENSCHOG00000009392SNRPF100100.000ENSBTAG00000016271SNRPF74100.000Bos_taurus
ENSCHOG00000009392SNRPF9573.770WBGene00004918snr-57273.770Caenorhabditis_elegans
ENSCHOG00000009392SNRPF100100.000ENSCJAG00000002705-74100.000Callithrix_jacchus
ENSCHOG00000009392SNRPF10090.625ENSCAFG00000031151-7490.625Canis_familiaris
ENSCHOG00000009392SNRPF100100.000ENSCAFG00000006395-58100.000Canis_familiaris
ENSCHOG00000009392SNRPF10090.625ENSCAFG00020010823-7490.625Canis_lupus_dingo
ENSCHOG00000009392SNRPF9298.305ENSCAFG00020013161-6398.305Canis_lupus_dingo
ENSCHOG00000009392SNRPF10084.375ENSTSYG00000030635-7384.375Carlito_syrichta
ENSCHOG00000009392SNRPF9796.774ENSTSYG00000031636-5296.774Carlito_syrichta
ENSCHOG00000009392SNRPF10093.846ENSTSYG00000036502-7493.846Carlito_syrichta
ENSCHOG00000009392SNRPF98100.000ENSCAPG00000007242SNRPF74100.000Cavia_aperea
ENSCHOG00000009392SNRPF100100.000ENSCPOG00000013898SNRPF74100.000Cavia_porcellus
ENSCHOG00000009392SNRPF10089.062ENSCCAG00000033627-5089.062Cebus_capucinus
ENSCHOG00000009392SNRPF100100.000ENSCCAG00000037378-74100.000Cebus_capucinus
ENSCHOG00000009392SNRPF100100.000ENSCCAG00000017356-74100.000Cebus_capucinus
ENSCHOG00000009392SNRPF100100.000ENSCLAG00000007200SNRPF74100.000Chinchilla_lanigera
ENSCHOG00000009392SNRPF100100.000ENSCSAG00000003602-52100.000Chlorocebus_sabaeus
ENSCHOG00000009392SNRPF9898.413ENSCPBG00000024287-5198.413Chrysemys_picta_bellii
ENSCHOG00000009392SNRPF10092.188ENSCPBG00000006227-7492.188Chrysemys_picta_bellii
ENSCHOG00000009392SNRPF10092.188ENSCPBG00000001985-7692.188Chrysemys_picta_bellii
ENSCHOG00000009392SNRPF10090.625ENSCPBG00000026463-7490.625Chrysemys_picta_bellii
ENSCHOG00000009392SNRPF9890.476ENSCSAVG00000007498-7290.476Ciona_savignyi
ENSCHOG00000009392SNRPF100100.000ENSCGRG00001017100-74100.000Cricetulus_griseus_chok1gshd
ENSCHOG00000009392SNRPF10090.625ENSCGRG00001008965-5090.625Cricetulus_griseus_chok1gshd
ENSCHOG00000009392SNRPF10090.625ENSCGRG00000018878-8090.625Cricetulus_griseus_crigri
ENSCHOG00000009392SNRPF100100.000ENSCGRG00000000336-74100.000Cricetulus_griseus_crigri
ENSCHOG00000009392SNRPF10095.312ENSCSEG00000004748snrpf7495.312Cynoglossus_semilaevis
ENSCHOG00000009392SNRPF9896.825ENSCVAG00000000397snrpf5096.825Cyprinodon_variegatus
ENSCHOG00000009392SNRPF10093.939ENSDARG00000105037snrpf7593.939Danio_rerio
ENSCHOG00000009392SNRPF10098.438ENSDNOG00000048989-5798.438Dasypus_novemcinctus
ENSCHOG00000009392SNRPF10087.500ENSDNOG00000049373-5687.500Dasypus_novemcinctus
ENSCHOG00000009392SNRPF9888.889ENSDORG00000025351-8888.889Dipodomys_ordii
ENSCHOG00000009392SNRPF7597.917ENSDORG00000029740-7379.688Dipodomys_ordii
ENSCHOG00000009392SNRPF9782.258FBgn0000426SmF7082.258Drosophila_melanogaster
ENSCHOG00000009392SNRPF100100.000ENSETEG00000001558-74100.000Echinops_telfairi
ENSCHOG00000009392SNRPF9493.333ENSEBUG00000001793-6593.333Eptatretus_burgeri
ENSCHOG00000009392SNRPF100100.000ENSECAG00000019817SNRPF52100.000Equus_caballus
ENSCHOG00000009392SNRPF98100.000ENSEEUG00000013509SNRPF74100.000Erinaceus_europaeus
ENSCHOG00000009392SNRPF10093.750ENSELUG00000007737RUXF7493.750Esox_lucius
ENSCHOG00000009392SNRPF10093.750ENSELUG00000003121RUXF7493.750Esox_lucius
ENSCHOG00000009392SNRPF9879.365ENSFCAG00000021942-7779.365Felis_catus
ENSCHOG00000009392SNRPF100100.000ENSFCAG00000029966-74100.000Felis_catus
ENSCHOG00000009392SNRPF9876.190ENSFCAG00000031148-5876.190Felis_catus
ENSCHOG00000009392SNRPF98100.000ENSFALG00000010799SNRPF73100.000Ficedula_albicollis
ENSCHOG00000009392SNRPF100100.000ENSFDAG00000002831-74100.000Fukomys_damarensis
ENSCHOG00000009392SNRPF9896.825ENSFHEG00000003240snrpf5596.825Fundulus_heteroclitus
ENSCHOG00000009392SNRPF9896.825ENSGMOG00000007741snrpf7496.825Gadus_morhua
ENSCHOG00000009392SNRPF100100.000ENSGALG00000011409SNRPF74100.000Gallus_gallus
ENSCHOG00000009392SNRPF9796.774ENSGAFG00000016187snrpf7196.774Gambusia_affinis
ENSCHOG00000009392SNRPF9895.238ENSGACG00000020055snrpf7495.238Gasterosteus_aculeatus
ENSCHOG00000009392SNRPF10093.750ENSGAGG00000020974-5493.750Gopherus_agassizii
ENSCHOG00000009392SNRPF8198.077ENSGAGG00000012945-5995.312Gopherus_agassizii
ENSCHOG00000009392SNRPF5997.368ENSGAGG00000011163-6797.368Gopherus_agassizii
ENSCHOG00000009392SNRPF10090.625ENSGAGG00000014132-7790.625Gopherus_agassizii
ENSCHOG00000009392SNRPF8992.982ENSGAGG00000022991-6792.982Gopherus_agassizii
ENSCHOG00000009392SNRPF10070.312ENSGGOG00000039564-7570.312Gorilla_gorilla
ENSCHOG00000009392SNRPF10075.000ENSGGOG00000039936-6975.000Gorilla_gorilla
ENSCHOG00000009392SNRPF100100.000ENSGGOG00000001127-74100.000Gorilla_gorilla
ENSCHOG00000009392SNRPF10098.438ENSHGLG00000021172-7498.438Heterocephalus_glaber_female
ENSCHOG00000009392SNRPF100100.000ENSHGLG00000009108SNRPF74100.000Heterocephalus_glaber_female
ENSCHOG00000009392SNRPF98100.000ENSHGLG00100008103-74100.000Heterocephalus_glaber_male
ENSCHOG00000009392SNRPF10098.438ENSHGLG00100019596-7498.438Heterocephalus_glaber_male
ENSCHOG00000009392SNRPF9785.507ENSHCOG00000018663snrpf5485.507Hippocampus_comes
ENSCHOG00000009392SNRPF10096.875ENSIPUG00000018994snrpf7496.875Ictalurus_punctatus
ENSCHOG00000009392SNRPF100100.000ENSSTOG00000010434-74100.000Ictidomys_tridecemlineatus
ENSCHOG00000009392SNRPF10087.500ENSJJAG00000010502-7687.500Jaculus_jaculus
ENSCHOG00000009392SNRPF7095.556ENSJJAG00000004828-6995.556Jaculus_jaculus
ENSCHOG00000009392SNRPF10079.688ENSJJAG00000004558-7679.688Jaculus_jaculus
ENSCHOG00000009392SNRPF100100.000ENSJJAG00000011272-74100.000Jaculus_jaculus
ENSCHOG00000009392SNRPF10095.312ENSKMAG00000013566snrpf7495.312Kryptolebias_marmoratus
ENSCHOG00000009392SNRPF10095.312ENSLBEG00000008800snrpf7495.312Labrus_bergylta
ENSCHOG00000009392SNRPF10098.438ENSLACG00000002456-5598.438Latimeria_chalumnae
ENSCHOG00000009392SNRPF10093.750ENSLOCG00000015744snrpf7493.750Lepisosteus_oculatus
ENSCHOG00000009392SNRPF98100.000ENSLAFG00000017426SNRPF73100.000Loxodonta_africana
ENSCHOG00000009392SNRPF9795.161ENSMAMG00000016593snrpf7395.161Mastacembelus_armatus
ENSCHOG00000009392SNRPF9796.774ENSMZEG00005014701snrpf7396.774Maylandia_zebra
ENSCHOG00000009392SNRPF97100.000ENSMGAG00000011453-56100.000Meleagris_gallopavo
ENSCHOG00000009392SNRPF6197.436ENSMAUG00000010289-5197.436Mesocricetus_auratus
ENSCHOG00000009392SNRPF10093.750ENSMAUG00000008799-7493.750Mesocricetus_auratus
ENSCHOG00000009392SNRPF81100.000ENSMAUG00000019737-70100.000Mesocricetus_auratus
ENSCHOG00000009392SNRPF81100.000ENSMAUG00000016909-70100.000Mesocricetus_auratus
ENSCHOG00000009392SNRPF100100.000ENSMICG00000012153-74100.000Microcebus_murinus
ENSCHOG00000009392SNRPF10093.750ENSMICG00000030494-5193.750Microcebus_murinus
ENSCHOG00000009392SNRPF8984.211ENSMOCG00000020220-7384.211Microtus_ochrogaster
ENSCHOG00000009392SNRPF100100.000ENSMOCG00000020437Snrpf74100.000Microtus_ochrogaster
ENSCHOG00000009392SNRPF10084.375ENSMOCG00000022166-7084.375Microtus_ochrogaster
ENSCHOG00000009392SNRPF9896.825ENSMMOG00000007127snrpf7596.825Mola_mola
ENSCHOG00000009392SNRPF100100.000ENSMODG00000008091SNRPF56100.000Monodelphis_domestica
ENSCHOG00000009392SNRPF9796.774ENSMALG00000012328snrpf7396.774Monopterus_albus
ENSCHOG00000009392SNRPF100100.000MGP_CAROLIEiJ_G0015735-74100.000Mus_caroli
ENSCHOG00000009392SNRPF100100.000ENSMUSG00000020018Snrpf74100.000Mus_musculus
ENSCHOG00000009392SNRPF100100.000MGP_PahariEiJ_G0031350Snrpf74100.000Mus_pahari
ENSCHOG00000009392SNRPF100100.000MGP_SPRETEiJ_G0016553Snrpf74100.000Mus_spretus
ENSCHOG00000009392SNRPF100100.000ENSMPUG00000007176-57100.000Mustela_putorius_furo
ENSCHOG00000009392SNRPF100100.000ENSMLUG00000026149-60100.000Myotis_lucifugus
ENSCHOG00000009392SNRPF10079.688ENSMLUG00000026269-6079.688Myotis_lucifugus
ENSCHOG00000009392SNRPF100100.000ENSMLUG00000027932-60100.000Myotis_lucifugus
ENSCHOG00000009392SNRPF100100.000ENSMLUG00000029201-60100.000Myotis_lucifugus
ENSCHOG00000009392SNRPF98100.000ENSMLUG00000013577-74100.000Myotis_lucifugus
ENSCHOG00000009392SNRPF7789.796ENSNGAG00000005851-5889.796Nannospalax_galili
ENSCHOG00000009392SNRPF100100.000ENSNGAG00000024292-74100.000Nannospalax_galili
ENSCHOG00000009392SNRPF9896.825ENSNBRG00000011682snrpf6496.825Neolamprologus_brichardi
ENSCHOG00000009392SNRPF100100.000ENSODEG00000010328-74100.000Octodon_degus
ENSCHOG00000009392SNRPF10098.438ENSOCUG00000010925SNRPF5798.438Oryctolagus_cuniculus
ENSCHOG00000009392SNRPF9895.238ENSORLG00020008216snrpf7595.238Oryzias_latipes_hni
ENSCHOG00000009392SNRPF9895.238ENSORLG00015007418snrpf7595.238Oryzias_latipes_hsok
ENSCHOG00000009392SNRPF9795.161ENSOMEG00000003018snrpf7395.161Oryzias_melastigma
ENSCHOG00000009392SNRPF10098.438ENSOGAG00000030323-7498.438Otolemur_garnettii
ENSCHOG00000009392SNRPF100100.000ENSOARG00000011853-56100.000Ovis_aries
ENSCHOG00000009392SNRPF10070.312ENSPPAG00000037479-7670.312Pan_paniscus
ENSCHOG00000009392SNRPF10075.000ENSPPAG00000037544-6975.000Pan_paniscus
ENSCHOG00000009392SNRPF100100.000ENSPPRG00000005875-74100.000Panthera_pardus
ENSCHOG00000009392SNRPF10075.000ENSPPRG00000007449-6575.000Panthera_pardus
ENSCHOG00000009392SNRPF9876.190ENSPTIG00000005117-7576.190Panthera_tigris_altaica
ENSCHOG00000009392SNRPF100100.000ENSPTIG00000007520SNRPF74100.000Panthera_tigris_altaica
ENSCHOG00000009392SNRPF10070.312ENSPTRG00000047717-7670.312Pan_troglodytes
ENSCHOG00000009392SNRPF10075.000ENSPTRG00000043814-6975.000Pan_troglodytes
ENSCHOG00000009392SNRPF9896.825ENSPKIG00000014784snrpf6996.825Paramormyrops_kingsleyae
ENSCHOG00000009392SNRPF98100.000ENSPSIG00000016462SNRPF73100.000Pelodiscus_sinensis
ENSCHOG00000009392SNRPF9896.825ENSPMGG00000023548snrpf7596.825Periophthalmus_magnuspinnatus
ENSCHOG00000009392SNRPF100100.000ENSPEMG00000023326Snrpf74100.000Peromyscus_maniculatus_bairdii
ENSCHOG00000009392SNRPF9796.774ENSPLAG00000023932snrpf7396.774Poecilia_latipinna
ENSCHOG00000009392SNRPF9796.774ENSPMEG00000003377snrpf7396.774Poecilia_mexicana
ENSCHOG00000009392SNRPF9796.774ENSPREG00000022635snrpf7196.774Poecilia_reticulata
ENSCHOG00000009392SNRPF100100.000ENSPPYG00000004847-74100.000Pongo_abelii
ENSCHOG00000009392SNRPF100100.000ENSPCOG00000023833-74100.000Propithecus_coquereli
ENSCHOG00000009392SNRPF100100.000ENSPVAG00000009036SNRPF74100.000Pteropus_vampyrus
ENSCHOG00000009392SNRPF9796.774ENSPNYG00000021712snrpf7396.774Pundamilia_nyererei
ENSCHOG00000009392SNRPF9795.161ENSPNAG00000019117snrpf7395.161Pygocentrus_nattereri
ENSCHOG00000009392SNRPF100100.000ENSRNOG00000005556Snrpf74100.000Rattus_norvegicus
ENSCHOG00000009392SNRPF10096.875ENSRBIG00000030414-7496.875Rhinopithecus_bieti
ENSCHOG00000009392SNRPF10096.875ENSRROG00000021975-7496.875Rhinopithecus_roxellana
ENSCHOG00000009392SNRPF9553.226YPR182WSMX37253.226Saccharomyces_cerevisiae
ENSCHOG00000009392SNRPF10080.597ENSSBOG00000027638-7580.597Saimiri_boliviensis_boliviensis
ENSCHOG00000009392SNRPF10084.375ENSSBOG00000032297-7284.375Saimiri_boliviensis_boliviensis
ENSCHOG00000009392SNRPF100100.000ENSSBOG00000036179-74100.000Saimiri_boliviensis_boliviensis
ENSCHOG00000009392SNRPF100100.000ENSSBOG00000012868-74100.000Saimiri_boliviensis_boliviensis
ENSCHOG00000009392SNRPF98100.000ENSSHAG00000012294SNRPF57100.000Sarcophilus_harrisii
ENSCHOG00000009392SNRPF9896.825ENSSFOG00015021523snrpf9496.825Scleropages_formosus
ENSCHOG00000009392SNRPF10093.750ENSSMAG00000005533snrpf7493.750Scophthalmus_maximus
ENSCHOG00000009392SNRPF10096.875ENSSDUG00000016283snrpf7696.875Seriola_dumerili
ENSCHOG00000009392SNRPF9876.190ENSSLDG00000003885-7776.190Seriola_lalandi_dorsalis
ENSCHOG00000009392SNRPF10095.312ENSSLDG00000005119snrpf7495.312Seriola_lalandi_dorsalis
ENSCHOG00000009392SNRPF97100.000ENSSPUG00000014590-73100.000Sphenodon_punctatus
ENSCHOG00000009392SNRPF9896.825ENSSPAG00000003283snrpf7296.825Stegastes_partitus
ENSCHOG00000009392SNRPF100100.000ENSSSCG00000000895SNRPF74100.000Sus_scrofa
ENSCHOG00000009392SNRPF7393.617ENSTRUG00000014956snrpf6893.617Takifugu_rubripes
ENSCHOG00000009392SNRPF10095.312ENSTNIG00000012672snrpf7495.312Tetraodon_nigroviridis
ENSCHOG00000009392SNRPF67100.000ENSTTRG00000006070SNRPF50100.000Tursiops_truncatus
ENSCHOG00000009392SNRPF10089.062ENSUAMG00000001101-7589.062Ursus_americanus
ENSCHOG00000009392SNRPF100100.000ENSUAMG00000008176-82100.000Ursus_americanus
ENSCHOG00000009392SNRPF10089.062ENSUMAG00000006177-7589.062Ursus_maritimus
ENSCHOG00000009392SNRPF100100.000ENSUMAG00000003528-78100.000Ursus_maritimus
ENSCHOG00000009392SNRPF100100.000ENSVPAG00000008712-74100.000Vicugna_pacos
ENSCHOG00000009392SNRPF10092.188ENSVVUG00000023821-8292.188Vulpes_vulpes
ENSCHOG00000009392SNRPF9796.774ENSXCOG00000013860snrpf7196.774Xiphophorus_couchianus
ENSCHOG00000009392SNRPF9796.774ENSXMAG00000015448snrpf7396.774Xiphophorus_maculatus

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