EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000009860 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 37316 bases
Position: chrGeneScaffold_2307:614-37929
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000008751	SF3b1	PF08920.10	2e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000009906	SF3B1-201	3879	-	ENSCHOP00000008751	1292 (aa)	-	UPI0001F9FFA2

Gene Model

Click here to download ENSCHOG00000009860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000009860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000009860	SF3B1	76	98.438	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSCHOG00000009860	SF3B1	76	92.588	ENSAPOG00000011894	sf3b1	76	92.588	Acanthochromis_polyacanthus
ENSCHOG00000009860	SF3B1	75	98.182	ENSAMEG00000013809	SF3B1	75	98.214	Ailuropoda_melanoleuca
ENSCHOG00000009860	SF3B1	76	91.676	ENSACIG00000020910	sf3b1	73	91.676	Amphilophus_citrinellus
ENSCHOG00000009860	SF3B1	76	92.588	ENSAOCG00000004478	sf3b1	76	92.588	Amphiprion_ocellaris
ENSCHOG00000009860	SF3B1	76	92.588	ENSAPEG00000012937	sf3b1	76	92.588	Amphiprion_percula
ENSCHOG00000009860	SF3B1	76	92.588	ENSATEG00000020435	sf3b1	76	92.588	Anabas_testudineus
ENSCHOG00000009860	SF3B1	75	96.429	ENSAPLG00000003993	SF3B1	76	96.429	Anas_platyrhynchos
ENSCHOG00000009860	SF3B1	76	96.875	ENSACAG00000009612	SF3B1	76	96.923	Anolis_carolinensis
ENSCHOG00000009860	SF3B1	76	98.438	ENSANAG00000021577	SF3B1	80	96.154	Aotus_nancymaae
ENSCHOG00000009860	SF3B1	76	91.676	ENSACLG00000023470	sf3b1	76	91.676	Astatotilapia_calliptera
ENSCHOG00000009860	SF3B1	76	92.816	ENSAMXG00000002219	sf3b1	83	92.816	Astyanax_mexicanus
ENSCHOG00000009860	SF3B1	76	98.438	ENSBTAG00000008915	SF3B1	76	98.462	Bos_taurus
ENSCHOG00000009860	SF3B1	71	73.056	WBGene00011605	sftb-1	73	73.165	Caenorhabditis_elegans
ENSCHOG00000009860	SF3B1	76	98.438	ENSCJAG00000003902	SF3B1	76	98.462	Callithrix_jacchus
ENSCHOG00000009860	SF3B1	76	98.438	ENSCAFG00000010826	SF3B1	76	98.462	Canis_familiaris
ENSCHOG00000009860	SF3B1	76	98.438	ENSCAFG00020004750	SF3B1	76	98.462	Canis_lupus_dingo
ENSCHOG00000009860	SF3B1	76	98.438	ENSCHIG00000015226	SF3B1	76	98.462	Capra_hircus
ENSCHOG00000009860	SF3B1	76	98.438	ENSTSYG00000009214	SF3B1	76	98.462	Carlito_syrichta
ENSCHOG00000009860	SF3B1	75	96.154	ENSCAPG00000006547	SF3B1	76	96.154	Cavia_aperea
ENSCHOG00000009860	SF3B1	75	98.148	ENSCPOG00000009353	SF3B1	76	98.182	Cavia_porcellus
ENSCHOG00000009860	SF3B1	76	98.438	ENSCCAG00000020506	SF3B1	76	98.462	Cebus_capucinus
ENSCHOG00000009860	SF3B1	76	98.438	ENSCATG00000035735	SF3B1	76	98.462	Cercocebus_atys
ENSCHOG00000009860	SF3B1	75	98.182	ENSCLAG00000014767	SF3B1	76	98.214	Chinchilla_lanigera
ENSCHOG00000009860	SF3B1	76	98.438	ENSCSAG00000011505	SF3B1	76	98.462	Chlorocebus_sabaeus
ENSCHOG00000009860	SF3B1	76	98.438	ENSCPBG00000021902	SF3B1	78	98.462	Chrysemys_picta_bellii
ENSCHOG00000009860	SF3B1	50	82.504	ENSCING00000002558	-	83	82.504	Ciona_intestinalis
ENSCHOG00000009860	SF3B1	75	83.597	ENSCSAVG00000002559	-	78	83.616	Ciona_savignyi
ENSCHOG00000009860	SF3B1	76	98.438	ENSCANG00000029415	SF3B1	76	98.462	Colobus_angolensis_palliatus
ENSCHOG00000009860	SF3B1	76	98.438	ENSCGRG00001016990	Sf3b1	76	98.462	Cricetulus_griseus_chok1gshd
ENSCHOG00000009860	SF3B1	76	98.438	ENSCGRG00000005301	Sf3b1	76	98.462	Cricetulus_griseus_crigri
ENSCHOG00000009860	SF3B1	76	87.343	ENSCSEG00000003860	sf3b1	76	87.343	Cynoglossus_semilaevis
ENSCHOG00000009860	SF3B1	72	92.474	ENSCVAG00000003680	sf3b1	75	92.474	Cyprinodon_variegatus
ENSCHOG00000009860	SF3B1	76	92.588	ENSDARG00000056138	sf3b1	76	92.588	Danio_rerio
ENSCHOG00000009860	SF3B1	76	98.438	ENSDNOG00000011754	SF3B1	76	98.462	Dasypus_novemcinctus
ENSCHOG00000009860	SF3B1	75	98.214	ENSDORG00000002399	Sf3b1	78	98.214	Dipodomys_ordii
ENSCHOG00000009860	SF3B1	76	80.989	FBgn0031266	Sf3b1	77	80.989	Drosophila_melanogaster
ENSCHOG00000009860	SF3B1	64	98.148	ENSETEG00000009188	SF3B1	78	98.182	Echinops_telfairi
ENSCHOG00000009860	SF3B1	75	89.863	ENSEBUG00000004325	sf3b1	83	89.863	Eptatretus_burgeri
ENSCHOG00000009860	SF3B1	76	98.438	ENSEASG00005020159	SF3B1	74	98.462	Equus_asinus_asinus
ENSCHOG00000009860	SF3B1	76	98.438	ENSECAG00000021657	SF3B1	74	98.462	Equus_caballus
ENSCHOG00000009860	SF3B1	63	98.462	ENSEEUG00000000836	SF3B1	63	98.462	Erinaceus_europaeus
ENSCHOG00000009860	SF3B1	76	92.360	ENSELUG00000005977	sf3b1	74	92.360	Esox_lucius
ENSCHOG00000009860	SF3B1	76	98.438	ENSFCAG00000005038	SF3B1	76	98.462	Felis_catus
ENSCHOG00000009860	SF3B1	75	96.429	ENSFALG00000004281	SF3B1	76	96.429	Ficedula_albicollis
ENSCHOG00000009860	SF3B1	76	98.438	ENSFDAG00000017510	SF3B1	76	98.462	Fukomys_damarensis
ENSCHOG00000009860	SF3B1	76	92.474	ENSFHEG00000014333	sf3b1	76	92.474	Fundulus_heteroclitus
ENSCHOG00000009860	SF3B1	76	92.588	ENSGMOG00000006773	sf3b1	76	92.588	Gadus_morhua
ENSCHOG00000009860	SF3B1	76	96.923	ENSGALG00000008038	SF3B1	76	96.923	Gallus_gallus
ENSCHOG00000009860	SF3B1	74	92.360	ENSGAFG00000000704	sf3b1	75	92.360	Gambusia_affinis
ENSCHOG00000009860	SF3B1	76	92.474	ENSGACG00000008839	sf3b1	76	92.474	Gasterosteus_aculeatus
ENSCHOG00000009860	SF3B1	75	96.364	ENSGAGG00000017478	SF3B1	77	94.231	Gopherus_agassizii
ENSCHOG00000009860	SF3B1	75	98.182	ENSGGOG00000009264	SF3B1	78	98.214	Gorilla_gorilla
ENSCHOG00000009860	SF3B1	76	91.676	ENSHBUG00000007705	sf3b1	76	91.676	Haplochromis_burtoni
ENSCHOG00000009860	SF3B1	75	98.182	ENSHGLG00000008285	-	75	98.214	Heterocephalus_glaber_female
ENSCHOG00000009860	SF3B1	75	98.182	ENSHGLG00100005535	-	77	98.214	Heterocephalus_glaber_male
ENSCHOG00000009860	SF3B1	76	92.474	ENSHCOG00000016775	sf3b1	75	92.474	Hippocampus_comes
ENSCHOG00000009860	SF3B1	76	92.702	ENSIPUG00000013171	sf3b1	77	92.702	Ictalurus_punctatus
ENSCHOG00000009860	SF3B1	76	98.438	ENSSTOG00000011034	SF3B1	76	98.462	Ictidomys_tridecemlineatus
ENSCHOG00000009860	SF3B1	75	98.000	ENSJJAG00000010903	Sf3b1	76	98.039	Jaculus_jaculus
ENSCHOG00000009860	SF3B1	76	92.360	ENSKMAG00000004009	sf3b1	76	92.360	Kryptolebias_marmoratus
ENSCHOG00000009860	SF3B1	76	92.360	ENSLBEG00000022208	sf3b1	76	92.360	Labrus_bergylta
ENSCHOG00000009860	SF3B1	75	90.385	ENSLACG00000014832	SF3B1	75	90.385	Latimeria_chalumnae
ENSCHOG00000009860	SF3B1	76	93.158	ENSLOCG00000003899	sf3b1	76	93.158	Lepisosteus_oculatus
ENSCHOG00000009860	SF3B1	76	98.438	ENSLAFG00000001956	SF3B1	76	98.462	Loxodonta_africana
ENSCHOG00000009860	SF3B1	75	98.182	ENSMMUG00000022430	SF3B1	75	98.214	Macaca_mulatta
ENSCHOG00000009860	SF3B1	76	98.438	ENSMNEG00000042333	SF3B1	80	96.154	Macaca_nemestrina
ENSCHOG00000009860	SF3B1	71	96.154	ENSMLEG00000026141	SF3B1	77	96.154	Mandrillus_leucophaeus
ENSCHOG00000009860	SF3B1	76	92.474	ENSMAMG00000010241	sf3b1	76	92.474	Mastacembelus_armatus
ENSCHOG00000009860	SF3B1	76	91.676	ENSMZEG00005021254	sf3b1	76	91.676	Maylandia_zebra
ENSCHOG00000009860	SF3B1	75	94.231	ENSMGAG00000007017	SF3B1	76	94.231	Meleagris_gallopavo
ENSCHOG00000009860	SF3B1	76	98.462	ENSMAUG00000009071	Sf3b1	75	98.462	Mesocricetus_auratus
ENSCHOG00000009860	SF3B1	76	98.438	ENSMICG00000013879	SF3B1	76	98.462	Microcebus_murinus
ENSCHOG00000009860	SF3B1	75	96.429	ENSMOCG00000000455	Sf3b1	75	96.491	Microtus_ochrogaster
ENSCHOG00000009860	SF3B1	65	91.741	ENSMMOG00000000475	sf3b1	78	91.741	Mola_mola
ENSCHOG00000009860	SF3B1	76	96.875	ENSMODG00000012275	SF3B1	76	96.923	Monodelphis_domestica
ENSCHOG00000009860	SF3B1	76	92.588	ENSMALG00000017211	sf3b1	76	92.588	Monopterus_albus
ENSCHOG00000009860	SF3B1	76	98.438	MGP_CAROLIEiJ_G0014141	Sf3b1	76	98.462	Mus_caroli
ENSCHOG00000009860	SF3B1	76	98.438	ENSMUSG00000025982	Sf3b1	76	98.462	Mus_musculus
ENSCHOG00000009860	SF3B1	76	98.438	MGP_SPRETEiJ_G0014947	Sf3b1	76	98.462	Mus_spretus
ENSCHOG00000009860	SF3B1	76	98.438	ENSMPUG00000007799	SF3B1	76	98.462	Mustela_putorius_furo
ENSCHOG00000009860	SF3B1	76	98.438	ENSMLUG00000000840	SF3B1	76	98.462	Myotis_lucifugus
ENSCHOG00000009860	SF3B1	76	96.154	ENSNGAG00000021884	-	76	96.154	Nannospalax_galili
ENSCHOG00000009860	SF3B1	76	91.676	ENSNBRG00000015816	sf3b1	78	91.676	Neolamprologus_brichardi
ENSCHOG00000009860	SF3B1	76	98.438	ENSNLEG00000006861	SF3B1	76	98.462	Nomascus_leucogenys
ENSCHOG00000009860	SF3B1	76	98.462	ENSOPRG00000008596	SF3B1	76	98.462	Ochotona_princeps
ENSCHOG00000009860	SF3B1	76	98.438	ENSODEG00000011153	-	76	98.462	Octodon_degus
ENSCHOG00000009860	SF3B1	76	91.676	ENSONIG00000013758	sf3b1	76	91.676	Oreochromis_niloticus
ENSCHOG00000009860	SF3B1	71	96.154	ENSOCUG00000012722	-	82	96.154	Oryctolagus_cuniculus
ENSCHOG00000009860	SF3B1	76	92.360	ENSORLG00000020219	sf3b1	76	92.360	Oryzias_latipes
ENSCHOG00000009860	SF3B1	76	92.360	ENSORLG00020001746	sf3b1	76	92.360	Oryzias_latipes_hni
ENSCHOG00000009860	SF3B1	76	92.360	ENSOMEG00000019231	sf3b1	76	92.360	Oryzias_melastigma
ENSCHOG00000009860	SF3B1	76	98.438	ENSOARG00000015374	SF3B1	76	98.462	Ovis_aries
ENSCHOG00000009860	SF3B1	76	98.438	ENSPPAG00000035007	SF3B1	76	98.462	Pan_paniscus
ENSCHOG00000009860	SF3B1	76	98.438	ENSPPRG00000009090	SF3B1	76	98.462	Panthera_pardus
ENSCHOG00000009860	SF3B1	76	98.438	ENSPTIG00000021557	SF3B1	76	98.462	Panthera_tigris_altaica
ENSCHOG00000009860	SF3B1	75	98.182	ENSPTRG00000012771	SF3B1	77	98.214	Pan_troglodytes
ENSCHOG00000009860	SF3B1	76	98.438	ENSPANG00000013417	SF3B1	76	98.462	Papio_anubis
ENSCHOG00000009860	SF3B1	76	92.816	ENSPKIG00000000784	sf3b1	76	92.816	Paramormyrops_kingsleyae
ENSCHOG00000009860	SF3B1	75	98.148	ENSPSIG00000017222	SF3B1	76	98.182	Pelodiscus_sinensis
ENSCHOG00000009860	SF3B1	72	92.702	ENSPMGG00000004330	sf3b1	79	92.702	Periophthalmus_magnuspinnatus
ENSCHOG00000009860	SF3B1	75	98.182	ENSPEMG00000010699	Sf3b1	76	98.214	Peromyscus_maniculatus_bairdii
ENSCHOG00000009860	SF3B1	76	90.557	ENSPMAG00000001311	sf3b1	76	90.557	Petromyzon_marinus
ENSCHOG00000009860	SF3B1	76	95.385	ENSPCIG00000010642	SF3B1	76	95.385	Phascolarctos_cinereus
ENSCHOG00000009860	SF3B1	76	92.474	ENSPFOG00000000073	sf3b1	76	92.474	Poecilia_formosa
ENSCHOG00000009860	SF3B1	76	92.474	ENSPLAG00000002293	sf3b1	76	92.474	Poecilia_latipinna
ENSCHOG00000009860	SF3B1	76	92.474	ENSPMEG00000000446	sf3b1	74	92.474	Poecilia_mexicana
ENSCHOG00000009860	SF3B1	76	92.474	ENSPREG00000019652	sf3b1	76	92.474	Poecilia_reticulata
ENSCHOG00000009860	SF3B1	75	98.276	ENSPPYG00000013044	SF3B1	87	98.276	Pongo_abelii
ENSCHOG00000009860	SF3B1	76	98.438	ENSPCAG00000009292	SF3B1	76	98.462	Procavia_capensis
ENSCHOG00000009860	SF3B1	76	98.438	ENSPCOG00000024074	SF3B1	76	98.462	Propithecus_coquereli
ENSCHOG00000009860	SF3B1	76	98.438	ENSPVAG00000008302	SF3B1	76	98.462	Pteropus_vampyrus
ENSCHOG00000009860	SF3B1	76	91.676	ENSPNYG00000014939	sf3b1	76	91.676	Pundamilia_nyererei
ENSCHOG00000009860	SF3B1	76	92.816	ENSPNAG00000008288	sf3b1	76	92.816	Pygocentrus_nattereri
ENSCHOG00000009860	SF3B1	76	98.438	ENSRNOG00000013516	Sf3b1	76	98.462	Rattus_norvegicus
ENSCHOG00000009860	SF3B1	76	96.154	ENSRBIG00000026096	SF3B1	76	96.154	Rhinopithecus_bieti
ENSCHOG00000009860	SF3B1	76	98.438	ENSRROG00000031308	SF3B1	76	98.462	Rhinopithecus_roxellana
ENSCHOG00000009860	SF3B1	76	98.438	ENSSBOG00000020080	SF3B1	76	98.462	Saimiri_boliviensis_boliviensis
ENSCHOG00000009860	SF3B1	76	96.875	ENSSHAG00000017564	SF3B1	76	96.923	Sarcophilus_harrisii
ENSCHOG00000009860	SF3B1	76	93.044	ENSSFOG00015021535	sf3b1	76	93.044	Scleropages_formosus
ENSCHOG00000009860	SF3B1	75	92.588	ENSSMAG00000013977	sf3b1	82	92.588	Scophthalmus_maximus
ENSCHOG00000009860	SF3B1	76	92.588	ENSSDUG00000017422	sf3b1	76	92.588	Seriola_dumerili
ENSCHOG00000009860	SF3B1	76	92.588	ENSSLDG00000019495	sf3b1	76	92.588	Seriola_lalandi_dorsalis
ENSCHOG00000009860	SF3B1	58	96.154	ENSSARG00000007016	SF3B1	58	96.154	Sorex_araneus
ENSCHOG00000009860	SF3B1	76	98.438	ENSSPUG00000000410	SF3B1	76	98.462	Sphenodon_punctatus
ENSCHOG00000009860	SF3B1	76	92.588	ENSSPAG00000010451	sf3b1	75	92.588	Stegastes_partitus
ENSCHOG00000009860	SF3B1	72	98.438	ENSSSCG00000016075	SF3B1	78	98.462	Sus_scrofa
ENSCHOG00000009860	SF3B1	76	96.923	ENSTGUG00000010553	SF3B1	76	96.923	Taeniopygia_guttata
ENSCHOG00000009860	SF3B1	76	92.360	ENSTRUG00000015534	sf3b1	76	92.360	Takifugu_rubripes
ENSCHOG00000009860	SF3B1	72	98.438	ENSTBEG00000008714	SF3B1	79	98.462	Tupaia_belangeri
ENSCHOG00000009860	SF3B1	68	100.000	ENSTTRG00000003414	SF3B1	69	100.000	Tursiops_truncatus
ENSCHOG00000009860	SF3B1	60	98.182	ENSUAMG00000018506	SF3B1	75	98.214	Ursus_americanus
ENSCHOG00000009860	SF3B1	76	98.438	ENSUMAG00000020945	SF3B1	76	98.462	Ursus_maritimus
ENSCHOG00000009860	SF3B1	72	98.438	ENSVPAG00000005798	SF3B1	73	98.462	Vicugna_pacos
ENSCHOG00000009860	SF3B1	76	98.438	ENSVVUG00000025948	SF3B1	72	98.462	Vulpes_vulpes
ENSCHOG00000009860	SF3B1	76	94.231	ENSXETG00000013339	sf3b1	76	94.231	Xenopus_tropicalis
ENSCHOG00000009860	SF3B1	76	89.966	ENSXCOG00000018086	sf3b1	78	89.966	Xiphophorus_couchianus
ENSCHOG00000009860	SF3B1	76	92.474	ENSXMAG00000007369	sf3b1	76	92.474	Xiphophorus_maculatus