EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000009886 (Gene tree)
Gene ID: -
Gene Symbol: RAB5C
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 3156 bases
Position: chrscaffold_47198:6260-9415
Accession: 9785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000008746	MMR_HSR1	PF01926.23	3.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000009901	RAB5C-201	534	-	ENSCHOP00000008746	178 (aa)	-	UPI0001F9FCD5

Gene Model

Click here to download ENSCHOG00000009886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000009886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000009886	RAB5C	94	36.527	ENSCHOG00000000992	RAB6A	78	36.527
ENSCHOG00000009886	RAB5C	88	30.818	ENSCHOG00000009871	RAB34	61	30.818
ENSCHOG00000009886	RAB5C	88	43.210	ENSCHOG00000000365	RAB7A	91	43.210
ENSCHOG00000009886	RAB5C	87	38.750	ENSCHOG00000009633	RAB33B	82	38.750
ENSCHOG00000009886	RAB5C	87	37.107	ENSCHOG00000012678	RAB9B	79	37.107
ENSCHOG00000009886	RAB5C	87	45.161	ENSCHOG00000000710	RAB2B	78	45.161
ENSCHOG00000009886	RAB5C	89	32.075	ENSCHOG00000012754	NRAS	83	32.075
ENSCHOG00000009886	RAB5C	88	39.241	ENSCHOG00000013525	RAB11B	71	39.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000009886	RAB5C	100	99.438	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSCHOG00000009886	RAB5C	100	94.944	ENSAPOG00000016864	rab5c	81	94.944	Acanthochromis_polyacanthus
ENSCHOG00000009886	RAB5C	100	99.438	ENSAMEG00000006003	RAB5C	82	99.438	Ailuropoda_melanoleuca
ENSCHOG00000009886	RAB5C	100	94.382	ENSACIG00000010896	rab5c	81	94.382	Amphilophus_citrinellus
ENSCHOG00000009886	RAB5C	100	94.944	ENSAOCG00000016614	rab5c	81	94.944	Amphiprion_ocellaris
ENSCHOG00000009886	RAB5C	96	95.906	ENSAPEG00000017868	-	78	95.906	Amphiprion_percula
ENSCHOG00000009886	RAB5C	100	95.506	ENSATEG00000001937	rab5c	82	95.506	Anabas_testudineus
ENSCHOG00000009886	RAB5C	100	98.876	ENSANAG00000025390	RAB5C	87	98.876	Aotus_nancymaae
ENSCHOG00000009886	RAB5C	100	93.820	ENSACLG00000002706	rab5c	81	93.820	Astatotilapia_calliptera
ENSCHOG00000009886	RAB5C	97	95.930	ENSACLG00000008615	-	81	94.444	Astatotilapia_calliptera
ENSCHOG00000009886	RAB5C	100	95.531	ENSAMXG00000043717	rab5c	81	95.531	Astyanax_mexicanus
ENSCHOG00000009886	RAB5C	97	96.512	ENSAMXG00000037267	-	82	96.512	Astyanax_mexicanus
ENSCHOG00000009886	RAB5C	100	98.876	ENSBTAG00000006982	RAB5C	82	98.876	Bos_taurus
ENSCHOG00000009886	RAB5C	100	84.358	WBGene00004268	rab-5	85	84.358	Caenorhabditis_elegans
ENSCHOG00000009886	RAB5C	100	99.438	ENSCAFG00000015629	RAB5C	82	99.438	Canis_familiaris
ENSCHOG00000009886	RAB5C	100	99.438	ENSCAFG00020013537	RAB5C	82	99.438	Canis_lupus_dingo
ENSCHOG00000009886	RAB5C	100	98.876	ENSCHIG00000012960	RAB5C	82	98.876	Capra_hircus
ENSCHOG00000009886	RAB5C	100	99.438	ENSTSYG00000030531	RAB5C	82	99.438	Carlito_syrichta
ENSCHOG00000009886	RAB5C	100	98.876	ENSCCAG00000025940	RAB5C	82	98.876	Cebus_capucinus
ENSCHOG00000009886	RAB5C	100	99.438	ENSCATG00000040873	RAB5C	82	99.438	Cercocebus_atys
ENSCHOG00000009886	RAB5C	100	98.315	ENSCLAG00000016650	RAB5C	82	98.315	Chinchilla_lanigera
ENSCHOG00000009886	RAB5C	100	84.270	ENSCING00000003340	-	82	84.270	Ciona_intestinalis
ENSCHOG00000009886	RAB5C	100	84.270	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSCHOG00000009886	RAB5C	100	99.438	ENSCGRG00001014226	Rab5c	82	99.438	Cricetulus_griseus_chok1gshd
ENSCHOG00000009886	RAB5C	100	99.438	ENSCGRG00000007534	Rab5c	82	99.438	Cricetulus_griseus_crigri
ENSCHOG00000009886	RAB5C	100	94.944	ENSCSEG00000017024	rab5c	81	94.944	Cynoglossus_semilaevis
ENSCHOG00000009886	RAB5C	100	94.944	ENSCVAG00000009550	rab5c	81	94.944	Cyprinodon_variegatus
ENSCHOG00000009886	RAB5C	100	98.876	ENSDNOG00000038853	RAB5C	88	98.876	Dasypus_novemcinctus
ENSCHOG00000009886	RAB5C	100	98.315	ENSDORG00000006819	Rab5c	82	98.315	Dipodomys_ordii
ENSCHOG00000009886	RAB5C	99	81.356	FBgn0014010	Rab5	80	81.356	Drosophila_melanogaster
ENSCHOG00000009886	RAB5C	100	86.517	ENSEBUG00000014794	rab5c	84	86.517	Eptatretus_burgeri
ENSCHOG00000009886	RAB5C	100	99.438	ENSEASG00005009281	RAB5C	82	99.438	Equus_asinus_asinus
ENSCHOG00000009886	RAB5C	100	99.438	ENSECAG00000025054	RAB5C	82	99.438	Equus_caballus
ENSCHOG00000009886	RAB5C	100	98.876	ENSEEUG00000002790	RAB5C	82	98.876	Erinaceus_europaeus
ENSCHOG00000009886	RAB5C	100	95.506	ENSELUG00000018516	rab5c	82	95.506	Esox_lucius
ENSCHOG00000009886	RAB5C	100	94.382	ENSELUG00000010439	-	81	94.382	Esox_lucius
ENSCHOG00000009886	RAB5C	100	98.876	ENSFCAG00000002148	RAB5C	82	98.876	Felis_catus
ENSCHOG00000009886	RAB5C	100	97.191	ENSFDAG00000021541	RAB5C	82	97.191	Fukomys_damarensis
ENSCHOG00000009886	RAB5C	100	94.413	ENSFHEG00000015268	-	81	94.413	Fundulus_heteroclitus
ENSCHOG00000009886	RAB5C	100	94.944	ENSFHEG00000012117	rab5c	81	94.944	Fundulus_heteroclitus
ENSCHOG00000009886	RAB5C	100	93.820	ENSGMOG00000015096	rab5c	81	93.820	Gadus_morhua
ENSCHOG00000009886	RAB5C	97	87.209	ENSGMOG00000001876	-	99	87.209	Gadus_morhua
ENSCHOG00000009886	RAB5C	100	95.506	ENSGAFG00000000884	rab5c	81	95.506	Gambusia_affinis
ENSCHOG00000009886	RAB5C	100	94.413	ENSGAFG00000003642	-	80	94.413	Gambusia_affinis
ENSCHOG00000009886	RAB5C	100	93.820	ENSGACG00000008659	rab5c	81	93.820	Gasterosteus_aculeatus
ENSCHOG00000009886	RAB5C	100	99.438	ENSGGOG00000005472	RAB5C	82	99.438	Gorilla_gorilla
ENSCHOG00000009886	RAB5C	97	95.930	ENSHBUG00000006823	-	81	94.444	Haplochromis_burtoni
ENSCHOG00000009886	RAB5C	100	93.820	ENSHBUG00000002014	rab5c	81	93.820	Haplochromis_burtoni
ENSCHOG00000009886	RAB5C	100	97.191	ENSHGLG00000012067	RAB5C	82	97.191	Heterocephalus_glaber_female
ENSCHOG00000009886	RAB5C	97	89.017	ENSHCOG00000020238	-	83	87.845	Hippocampus_comes
ENSCHOG00000009886	RAB5C	100	94.972	ENSHCOG00000004662	rab5c	80	94.972	Hippocampus_comes
ENSCHOG00000009886	RAB5C	97	93.023	ENSIPUG00000020082	rab5c	81	93.333	Ictalurus_punctatus
ENSCHOG00000009886	RAB5C	100	99.438	ENSSTOG00000006620	RAB5C	82	99.438	Ictidomys_tridecemlineatus
ENSCHOG00000009886	RAB5C	100	99.438	ENSJJAG00000021181	Rab5c	82	99.438	Jaculus_jaculus
ENSCHOG00000009886	RAB5C	100	92.737	ENSKMAG00000017417	-	81	92.737	Kryptolebias_marmoratus
ENSCHOG00000009886	RAB5C	100	94.382	ENSKMAG00000020038	rab5c	81	94.382	Kryptolebias_marmoratus
ENSCHOG00000009886	RAB5C	100	95.506	ENSLBEG00000004128	rab5c	81	95.506	Labrus_bergylta
ENSCHOG00000009886	RAB5C	100	92.737	ENSLBEG00000010408	-	81	92.737	Labrus_bergylta
ENSCHOG00000009886	RAB5C	100	96.629	ENSLOCG00000012566	rab5c	83	96.629	Lepisosteus_oculatus
ENSCHOG00000009886	RAB5C	100	99.438	ENSMFAG00000039627	RAB5C	82	99.438	Macaca_fascicularis
ENSCHOG00000009886	RAB5C	100	99.438	ENSMNEG00000000355	RAB5C	82	99.438	Macaca_nemestrina
ENSCHOG00000009886	RAB5C	100	92.737	ENSMAMG00000016207	-	81	92.737	Mastacembelus_armatus
ENSCHOG00000009886	RAB5C	100	94.944	ENSMAMG00000022322	rab5c	81	94.944	Mastacembelus_armatus
ENSCHOG00000009886	RAB5C	97	95.930	ENSMZEG00005021090	-	81	94.444	Maylandia_zebra
ENSCHOG00000009886	RAB5C	100	93.820	ENSMZEG00005022735	rab5c	81	93.820	Maylandia_zebra
ENSCHOG00000009886	RAB5C	100	99.438	ENSMAUG00000015005	Rab5c	82	99.438	Mesocricetus_auratus
ENSCHOG00000009886	RAB5C	100	98.876	ENSMICG00000041608	RAB5C	82	98.876	Microcebus_murinus
ENSCHOG00000009886	RAB5C	100	99.438	ENSMOCG00000018531	-	82	99.438	Microtus_ochrogaster
ENSCHOG00000009886	RAB5C	100	94.944	ENSMMOG00000020621	rab5c	81	94.944	Mola_mola
ENSCHOG00000009886	RAB5C	96	90.058	ENSMALG00000006052	rab5c	78	89.831	Monopterus_albus
ENSCHOG00000009886	RAB5C	100	92.179	ENSMALG00000022348	-	81	92.179	Monopterus_albus
ENSCHOG00000009886	RAB5C	100	99.438	MGP_CAROLIEiJ_G0017184	Rab5c	82	99.438	Mus_caroli
ENSCHOG00000009886	RAB5C	100	99.438	ENSMUSG00000019173	Rab5c	82	99.438	Mus_musculus
ENSCHOG00000009886	RAB5C	100	99.438	MGP_PahariEiJ_G0018314	Rab5c	82	99.438	Mus_pahari
ENSCHOG00000009886	RAB5C	100	99.438	MGP_SPRETEiJ_G0018027	Rab5c	82	99.438	Mus_spretus
ENSCHOG00000009886	RAB5C	100	99.438	ENSMPUG00000010554	RAB5C	82	99.438	Mustela_putorius_furo
ENSCHOG00000009886	RAB5C	100	98.315	ENSNGAG00000010286	Rab5c	82	98.315	Nannospalax_galili
ENSCHOG00000009886	RAB5C	97	95.930	ENSNBRG00000016922	-	81	94.444	Neolamprologus_brichardi
ENSCHOG00000009886	RAB5C	100	94.382	ENSNBRG00000018165	rab5c	81	94.382	Neolamprologus_brichardi
ENSCHOG00000009886	RAB5C	100	92.135	ENSOPRG00000008255	RAB5C	100	92.135	Ochotona_princeps
ENSCHOG00000009886	RAB5C	100	97.753	ENSODEG00000017920	RAB5C	82	97.753	Octodon_degus
ENSCHOG00000009886	RAB5C	100	94.382	ENSONIG00000001113	rab5c	81	94.382	Oreochromis_niloticus
ENSCHOG00000009886	RAB5C	100	93.820	ENSORLG00000003882	rab5c	82	93.820	Oryzias_latipes
ENSCHOG00000009886	RAB5C	100	93.820	ENSORLG00020008388	rab5c	82	93.820	Oryzias_latipes_hni
ENSCHOG00000009886	RAB5C	100	93.820	ENSORLG00015021900	rab5c	82	93.820	Oryzias_latipes_hsok
ENSCHOG00000009886	RAB5C	100	93.820	ENSOMEG00000023078	rab5c	82	93.820	Oryzias_melastigma
ENSCHOG00000009886	RAB5C	100	98.876	ENSOGAG00000009456	RAB5C	82	98.876	Otolemur_garnettii
ENSCHOG00000009886	RAB5C	100	98.876	ENSOARG00000018768	RAB5C	82	98.876	Ovis_aries
ENSCHOG00000009886	RAB5C	100	99.438	ENSPPAG00000037206	RAB5C	82	99.438	Pan_paniscus
ENSCHOG00000009886	RAB5C	100	98.876	ENSPPRG00000005745	RAB5C	82	98.876	Panthera_pardus
ENSCHOG00000009886	RAB5C	100	98.876	ENSPTIG00000008177	RAB5C	82	98.876	Panthera_tigris_altaica
ENSCHOG00000009886	RAB5C	100	99.438	ENSPTRG00000009194	RAB5C	82	99.438	Pan_troglodytes
ENSCHOG00000009886	RAB5C	100	94.944	ENSPKIG00000001237	-	82	94.944	Paramormyrops_kingsleyae
ENSCHOG00000009886	RAB5C	100	95.506	ENSPKIG00000020112	-	82	95.506	Paramormyrops_kingsleyae
ENSCHOG00000009886	RAB5C	100	91.011	ENSPMGG00000010792	rab5c	78	94.706	Periophthalmus_magnuspinnatus
ENSCHOG00000009886	RAB5C	100	99.438	ENSPEMG00000017971	Rab5c	82	99.438	Peromyscus_maniculatus_bairdii
ENSCHOG00000009886	RAB5C	100	86.517	ENSPMAG00000001399	rab5c	85	86.517	Petromyzon_marinus
ENSCHOG00000009886	RAB5C	100	87.978	ENSPMAG00000000008	rab5c	84	87.978	Petromyzon_marinus
ENSCHOG00000009886	RAB5C	100	85.955	ENSPMAG00000007867	rab5c	84	85.955	Petromyzon_marinus
ENSCHOG00000009886	RAB5C	100	98.876	ENSPCIG00000020225	-	82	98.876	Phascolarctos_cinereus
ENSCHOG00000009886	RAB5C	100	95.506	ENSPLAG00000004790	rab5c	81	95.506	Poecilia_latipinna
ENSCHOG00000009886	RAB5C	100	93.855	ENSPLAG00000016333	-	82	93.855	Poecilia_latipinna
ENSCHOG00000009886	RAB5C	100	95.506	ENSPMEG00000011336	rab5c	81	95.506	Poecilia_mexicana
ENSCHOG00000009886	RAB5C	100	94.413	ENSPMEG00000012614	-	80	94.413	Poecilia_mexicana
ENSCHOG00000009886	RAB5C	100	95.506	ENSPREG00000010146	rab5c	81	95.506	Poecilia_reticulata
ENSCHOG00000009886	RAB5C	100	94.413	ENSPREG00000022167	-	86	95.833	Poecilia_reticulata
ENSCHOG00000009886	RAB5C	100	99.438	ENSPPYG00000008398	RAB5C	82	99.438	Pongo_abelii
ENSCHOG00000009886	RAB5C	100	98.315	ENSPCAG00000016412	RAB5C	83	98.315	Procavia_capensis
ENSCHOG00000009886	RAB5C	100	98.315	ENSPCOG00000026327	RAB5C	82	98.315	Propithecus_coquereli
ENSCHOG00000009886	RAB5C	100	99.438	ENSPVAG00000003867	RAB5C	82	99.438	Pteropus_vampyrus
ENSCHOG00000009886	RAB5C	97	95.930	ENSPNYG00000015851	-	81	94.444	Pundamilia_nyererei
ENSCHOG00000009886	RAB5C	100	93.820	ENSPNYG00000010615	rab5c	81	93.820	Pundamilia_nyererei
ENSCHOG00000009886	RAB5C	97	94.767	ENSPNAG00000002218	-	81	94.767	Pygocentrus_nattereri
ENSCHOG00000009886	RAB5C	100	95.531	ENSPNAG00000028138	rab5c	81	95.531	Pygocentrus_nattereri
ENSCHOG00000009886	RAB5C	100	99.438	ENSRNOG00000018568	Rab5c	82	99.438	Rattus_norvegicus
ENSCHOG00000009886	RAB5C	100	99.438	ENSRBIG00000031376	RAB5C	82	99.438	Rhinopithecus_bieti
ENSCHOG00000009886	RAB5C	100	99.438	ENSRROG00000032895	RAB5C	82	99.438	Rhinopithecus_roxellana
ENSCHOG00000009886	RAB5C	100	98.876	ENSSBOG00000032552	-	82	98.876	Saimiri_boliviensis_boliviensis
ENSCHOG00000009886	RAB5C	100	98.876	ENSSHAG00000005267	-	82	98.876	Sarcophilus_harrisii
ENSCHOG00000009886	RAB5C	100	92.135	ENSSFOG00015009988	-	81	92.135	Scleropages_formosus
ENSCHOG00000009886	RAB5C	100	94.944	ENSSMAG00000007323	rab5c	81	94.944	Scophthalmus_maximus
ENSCHOG00000009886	RAB5C	100	95.506	ENSSDUG00000023008	rab5c	81	95.506	Seriola_dumerili
ENSCHOG00000009886	RAB5C	100	94.944	ENSSLDG00000017771	rab5c	81	94.944	Seriola_lalandi_dorsalis
ENSCHOG00000009886	RAB5C	100	98.876	ENSSPUG00000012950	-	82	98.876	Sphenodon_punctatus
ENSCHOG00000009886	RAB5C	100	95.506	ENSSPAG00000006436	rab5c	81	95.506	Stegastes_partitus
ENSCHOG00000009886	RAB5C	100	98.876	ENSSSCG00000032467	RAB5C	82	98.876	Sus_scrofa
ENSCHOG00000009886	RAB5C	100	93.820	ENSTRUG00000015590	rab5c	81	93.820	Takifugu_rubripes
ENSCHOG00000009886	RAB5C	99	93.333	ENSTNIG00000011711	rab5c	81	93.333	Tetraodon_nigroviridis
ENSCHOG00000009886	RAB5C	100	99.438	ENSTBEG00000007092	RAB5C	82	99.438	Tupaia_belangeri
ENSCHOG00000009886	RAB5C	100	98.876	ENSTTRG00000006673	RAB5C	82	98.876	Tursiops_truncatus
ENSCHOG00000009886	RAB5C	100	99.438	ENSUAMG00000024343	RAB5C	82	99.438	Ursus_americanus
ENSCHOG00000009886	RAB5C	100	99.438	ENSUMAG00000023270	RAB5C	82	99.438	Ursus_maritimus
ENSCHOG00000009886	RAB5C	100	94.972	ENSXCOG00000006300	-	80	94.972	Xiphophorus_couchianus
ENSCHOG00000009886	RAB5C	100	95.506	ENSXCOG00000016788	rab5c	81	95.506	Xiphophorus_couchianus
ENSCHOG00000009886	RAB5C	100	94.972	ENSXMAG00000022179	-	82	94.972	Xiphophorus_maculatus
ENSCHOG00000009886	RAB5C	100	95.506	ENSXMAG00000003266	rab5c	81	95.506	Xiphophorus_maculatus