EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000009909 (Gene tree)
Gene ID: -
Gene Symbol: ZNF408
Alias: FLJ12827
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 3586 bases
Position: chrGeneScaffold_6603:3739-7324
Accession: 20041
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000008780	zf-C2H2	PF00096.26	1.5e-36	1	6
ENSCHOP00000008780	zf-C2H2	PF00096.26	1.5e-36	2	6
ENSCHOP00000008780	zf-C2H2	PF00096.26	1.5e-36	3	6
ENSCHOP00000008780	zf-C2H2	PF00096.26	1.5e-36	4	6
ENSCHOP00000008780	zf-C2H2	PF00096.26	1.5e-36	5	6
ENSCHOP00000008780	zf-C2H2	PF00096.26	1.5e-36	6	6
ENSCHOP00000008780	zf-met	PF12874.7	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000009938	ZNF408-201	1581	-	ENSCHOP00000008780	527 (aa)	-	UPI0001F9FCEB

Gene Model

Click here to download ENSCHOG00000009909's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000009909's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000009909	ZNF408	54	40.807	ENSCHOG00000013069	-	73	39.024
ENSCHOG00000009909	ZNF408	54	41.919	ENSCHOG00000004832	-	83	40.588
ENSCHOG00000009909	ZNF408	53	36.331	ENSCHOG00000009162	-	93	36.331
ENSCHOG00000009909	ZNF408	53	40.244	ENSCHOG00000004232	-	82	40.000
ENSCHOG00000009909	ZNF408	53	39.858	ENSCHOG00000003808	-	94	39.858
ENSCHOG00000009909	ZNF408	54	37.687	ENSCHOG00000003898	-	100	37.313
ENSCHOG00000009909	ZNF408	52	34.052	ENSCHOG00000000113	ZFP64	55	31.538
ENSCHOG00000009909	ZNF408	54	39.352	ENSCHOG00000000300	-	53	38.384
ENSCHOG00000009909	ZNF408	54	44.186	ENSCHOG00000003880	ZFP1	69	44.186
ENSCHOG00000009909	ZNF408	54	40.437	ENSCHOG00000010443	ZNF233	65	40.437
ENSCHOG00000009909	ZNF408	54	36.965	ENSCHOG00000008173	-	70	35.370
ENSCHOG00000009909	ZNF408	52	40.789	ENSCHOG00000008899	-	100	40.397
ENSCHOG00000009909	ZNF408	54	41.667	ENSCHOG00000003944	-	70	41.304
ENSCHOG00000009909	ZNF408	54	39.207	ENSCHOG00000004429	-	72	36.525
ENSCHOG00000009909	ZNF408	53	43.827	ENSCHOG00000005861	-	99	38.462
ENSCHOG00000009909	ZNF408	54	36.250	ENSCHOG00000008632	-	71	35.417
ENSCHOG00000009909	ZNF408	54	41.343	ENSCHOG00000010954	-	85	41.343
ENSCHOG00000009909	ZNF408	54	39.474	ENSCHOG00000003925	-	61	37.102
ENSCHOG00000009909	ZNF408	51	38.686	ENSCHOG00000007046	-	53	36.496
ENSCHOG00000009909	ZNF408	53	38.272	ENSCHOG00000012411	ZNF582	55	34.340
ENSCHOG00000009909	ZNF408	54	40.650	ENSCHOG00000012657	ZNF227	72	39.576
ENSCHOG00000009909	ZNF408	54	37.931	ENSCHOG00000004080	ZNF317	65	37.931
ENSCHOG00000009909	ZNF408	54	40.805	ENSCHOG00000011095	ZNF112	73	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000009909	ZNF408	75	96.564	ENSG00000175213	ZNF408	56	96.564	Homo_sapiens
ENSCHOG00000009909	ZNF408	75	95.862	ENSAMEG00000006904	ZNF408	55	95.862	Ailuropoda_melanoleuca
ENSCHOG00000009909	ZNF408	75	96.220	ENSANAG00000036294	ZNF408	61	96.220	Aotus_nancymaae
ENSCHOG00000009909	ZNF408	75	96.907	ENSCJAG00000019859	ZNF408	55	96.907	Callithrix_jacchus
ENSCHOG00000009909	ZNF408	75	96.886	ENSCAFG00000009143	ZNF408	53	96.886	Canis_familiaris
ENSCHOG00000009909	ZNF408	75	96.886	ENSCAFG00020019155	ZNF408	53	96.886	Canis_lupus_dingo
ENSCHOG00000009909	ZNF408	70	93.772	ENSCHIG00000025346	ZNF408	61	93.772	Capra_hircus
ENSCHOG00000009909	ZNF408	75	95.876	ENSTSYG00000025443	ZNF408	58	95.876	Carlito_syrichta
ENSCHOG00000009909	ZNF408	75	96.564	ENSCCAG00000029472	ZNF408	56	96.564	Cebus_capucinus
ENSCHOG00000009909	ZNF408	75	88.396	ENSCGRG00001023588	Zfp408	56	88.055	Cricetulus_griseus_chok1gshd
ENSCHOG00000009909	ZNF408	75	88.396	ENSCGRG00000017618	Zfp408	56	88.055	Cricetulus_griseus_crigri
ENSCHOG00000009909	ZNF408	73	95.406	ENSDNOG00000047669	ZNF408	55	95.406	Dasypus_novemcinctus
ENSCHOG00000009909	ZNF408	73	91.901	ENSDORG00000000387	Zfp408	60	90.722	Dipodomys_ordii
ENSCHOG00000009909	ZNF408	62	91.469	ENSETEG00000017621	-	59	91.469	Echinops_telfairi
ENSCHOG00000009909	ZNF408	75	94.158	ENSEASG00005015461	ZNF408	55	94.158	Equus_asinus_asinus
ENSCHOG00000009909	ZNF408	75	94.158	ENSECAG00000010878	ZNF408	58	94.158	Equus_caballus
ENSCHOG00000009909	ZNF408	70	90.690	ENSEEUG00000010466	ZNF408	53	91.034	Erinaceus_europaeus
ENSCHOG00000009909	ZNF408	75	96.897	ENSFCAG00000029105	ZNF408	55	96.897	Felis_catus
ENSCHOG00000009909	ZNF408	53	57.801	ENSGMOG00000007809	-	100	57.801	Gadus_morhua
ENSCHOG00000009909	ZNF408	75	96.564	ENSGGOG00000010152	ZNF408	56	96.564	Gorilla_gorilla
ENSCHOG00000009909	ZNF408	75	96.220	ENSLAFG00000027848	ZNF408	64	96.220	Loxodonta_africana
ENSCHOG00000009909	ZNF408	75	97.595	ENSMICG00000045320	ZNF408	55	97.595	Microcebus_murinus
ENSCHOG00000009909	ZNF408	72	90.780	ENSMODG00000019895	-	55	90.780	Monodelphis_domestica
ENSCHOG00000009909	ZNF408	75	96.207	ENSMPUG00000005490	ZNF408	57	96.207	Mustela_putorius_furo
ENSCHOG00000009909	ZNF408	73	91.815	ENSNGAG00000000309	Zfp408	56	91.003	Nannospalax_galili
ENSCHOG00000009909	ZNF408	75	96.564	ENSNLEG00000014132	ZNF408	56	96.564	Nomascus_leucogenys
ENSCHOG00000009909	ZNF408	75	91.781	ENSOPRG00000009225	ZNF408	60	91.781	Ochotona_princeps
ENSCHOG00000009909	ZNF408	74	96.181	ENSOCUG00000010953	ZNF408	55	96.181	Oryctolagus_cuniculus
ENSCHOG00000009909	ZNF408	75	97.251	ENSOGAG00000034080	ZNF408	64	97.251	Otolemur_garnettii
ENSCHOG00000009909	ZNF408	75	96.564	ENSPPAG00000034993	ZNF408	56	96.564	Pan_paniscus
ENSCHOG00000009909	ZNF408	75	96.897	ENSPPRG00000016866	ZNF408	55	96.897	Panthera_pardus
ENSCHOG00000009909	ZNF408	75	96.897	ENSPTIG00000015467	ZNF408	55	96.897	Panthera_tigris_altaica
ENSCHOG00000009909	ZNF408	75	96.564	ENSPTRG00000003551	ZNF408	56	96.564	Pan_troglodytes
ENSCHOG00000009909	ZNF408	74	89.619	ENSPEMG00000016757	Zfp408	72	89.619	Peromyscus_maniculatus_bairdii
ENSCHOG00000009909	ZNF408	55	59.233	ENSPFOG00000001760	-	69	59.233	Poecilia_formosa
ENSCHOG00000009909	ZNF408	54	59.364	ENSPMEG00000021147	-	55	59.364	Poecilia_mexicana
ENSCHOG00000009909	ZNF408	75	96.220	ENSPPYG00000003318	ZNF408	66	96.220	Pongo_abelii
ENSCHOG00000009909	ZNF408	75	96.907	ENSPCAG00000014001	ZNF408	56	96.907	Procavia_capensis
ENSCHOG00000009909	ZNF408	75	97.251	ENSPCOG00000028698	ZNF408	56	97.251	Propithecus_coquereli
ENSCHOG00000009909	ZNF408	75	95.876	ENSPVAG00000015791	ZNF408	57	95.876	Pteropus_vampyrus
ENSCHOG00000009909	ZNF408	75	95.876	ENSSBOG00000033023	ZNF408	64	95.876	Saimiri_boliviensis_boliviensis
ENSCHOG00000009909	ZNF408	74	96.194	ENSSSCG00000023097	ZNF408	53	96.194	Sus_scrofa
ENSCHOG00000009909	ZNF408	73	96.279	ENSTBEG00000004260	ZNF408	58	96.279	Tupaia_belangeri
ENSCHOG00000009909	ZNF408	75	95.517	ENSUAMG00000026154	ZNF408	57	95.517	Ursus_americanus
ENSCHOG00000009909	ZNF408	75	95.517	ENSUMAG00000014405	ZNF408	57	95.517	Ursus_maritimus
ENSCHOG00000009909	ZNF408	75	96.886	ENSVVUG00000026805	ZNF408	53	96.886	Vulpes_vulpes
ENSCHOG00000009909	ZNF408	54	62.587	ENSXETG00000001980	znf408	78	61.189	Xenopus_tropicalis
ENSCHOG00000009909	ZNF408	54	59.364	ENSXCOG00000002869	-	57	58.657	Xiphophorus_couchianus
ENSCHOG00000009909	ZNF408	54	58.503	ENSXMAG00000018347	-	60	58.503	Xiphophorus_maculatus