EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000010249 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 6787 bases
Position: chrscaffold_40324:2069-8855
Accession: 25898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000009077	PseudoU_synth_2	PF00849.22	1.8e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000010274	RPUSD4-201	852	-	ENSCHOP00000009077	283 (aa)	-	UPI0001FA04BE

Gene Model

Click here to download ENSCHOG00000010249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000010249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000010249	RPUSD4	100	82.332	ENSG00000165526	RPUSD4	75	82.332	Homo_sapiens
ENSCHOG00000010249	RPUSD4	95	53.650	ENSAPOG00000011024	rpusd4	68	53.650	Acanthochromis_polyacanthus
ENSCHOG00000010249	RPUSD4	69	86.957	ENSAMEG00000005953	-	86	86.957	Ailuropoda_melanoleuca
ENSCHOG00000010249	RPUSD4	98	84.477	ENSAMEG00000000127	-	73	84.477	Ailuropoda_melanoleuca
ENSCHOG00000010249	RPUSD4	95	50.000	ENSACIG00000003533	rpusd4	80	50.000	Amphilophus_citrinellus
ENSCHOG00000010249	RPUSD4	98	52.837	ENSAOCG00000015409	rpusd4	70	52.837	Amphiprion_ocellaris
ENSCHOG00000010249	RPUSD4	98	53.546	ENSAPEG00000018935	rpusd4	70	53.546	Amphiprion_percula
ENSCHOG00000010249	RPUSD4	94	52.399	ENSATEG00000008059	rpusd4	67	52.399	Anabas_testudineus
ENSCHOG00000010249	RPUSD4	94	62.313	ENSAPLG00000013250	RPUSD4	92	62.313	Anas_platyrhynchos
ENSCHOG00000010249	RPUSD4	96	66.058	ENSACAG00000000189	RPUSD4	75	66.058	Anolis_carolinensis
ENSCHOG00000010249	RPUSD4	98	83.032	ENSANAG00000024050	RPUSD4	74	83.032	Aotus_nancymaae
ENSCHOG00000010249	RPUSD4	96	52.536	ENSACLG00000020996	rpusd4	71	52.536	Astatotilapia_calliptera
ENSCHOG00000010249	RPUSD4	95	50.000	ENSAMXG00000031479	rpusd4	77	50.000	Astyanax_mexicanus
ENSCHOG00000010249	RPUSD4	100	79.152	ENSBTAG00000020900	RPUSD4	75	79.152	Bos_taurus
ENSCHOG00000010249	RPUSD4	98	82.609	ENSCJAG00000042850	RPUSD4	70	82.609	Callithrix_jacchus
ENSCHOG00000010249	RPUSD4	100	83.746	ENSCAFG00000010488	RPUSD4	75	83.746	Canis_familiaris
ENSCHOG00000010249	RPUSD4	100	83.746	ENSCAFG00020010621	RPUSD4	75	83.746	Canis_lupus_dingo
ENSCHOG00000010249	RPUSD4	100	79.505	ENSCHIG00000009975	RPUSD4	75	79.505	Capra_hircus
ENSCHOG00000010249	RPUSD4	100	84.806	ENSTSYG00000008456	RPUSD4	75	84.806	Carlito_syrichta
ENSCHOG00000010249	RPUSD4	91	77.519	ENSCAPG00000006040	RPUSD4	100	77.519	Cavia_aperea
ENSCHOG00000010249	RPUSD4	100	80.919	ENSCPOG00000014971	RPUSD4	75	80.919	Cavia_porcellus
ENSCHOG00000010249	RPUSD4	98	83.696	ENSCCAG00000027838	RPUSD4	74	83.394	Cebus_capucinus
ENSCHOG00000010249	RPUSD4	100	84.099	ENSCATG00000041570	RPUSD4	75	84.099	Cercocebus_atys
ENSCHOG00000010249	RPUSD4	100	83.392	ENSCLAG00000016553	RPUSD4	75	83.392	Chinchilla_lanigera
ENSCHOG00000010249	RPUSD4	100	84.806	ENSCSAG00000002274	RPUSD4	75	84.806	Chlorocebus_sabaeus
ENSCHOG00000010249	RPUSD4	95	67.778	ENSCPBG00000011175	RPUSD4	93	67.778	Chrysemys_picta_bellii
ENSCHOG00000010249	RPUSD4	94	42.701	ENSCSAVG00000000872	-	53	42.701	Ciona_savignyi
ENSCHOG00000010249	RPUSD4	100	83.392	ENSCANG00000039684	RPUSD4	75	83.392	Colobus_angolensis_palliatus
ENSCHOG00000010249	RPUSD4	100	83.746	ENSCGRG00001024141	Rpusd4	75	83.746	Cricetulus_griseus_chok1gshd
ENSCHOG00000010249	RPUSD4	100	83.746	ENSCGRG00000014415	Rpusd4	75	83.746	Cricetulus_griseus_crigri
ENSCHOG00000010249	RPUSD4	94	52.941	ENSCVAG00000000392	rpusd4	77	52.941	Cyprinodon_variegatus
ENSCHOG00000010249	RPUSD4	94	52.574	ENSCVAG00000008761	rpusd4	69	52.574	Cyprinodon_variegatus
ENSCHOG00000010249	RPUSD4	95	51.095	ENSDARG00000012674	rpusd4	76	51.095	Danio_rerio
ENSCHOG00000010249	RPUSD4	100	86.219	ENSDNOG00000020026	RPUSD4	75	86.219	Dasypus_novemcinctus
ENSCHOG00000010249	RPUSD4	100	84.099	ENSDORG00000016717	Rpusd4	75	84.099	Dipodomys_ordii
ENSCHOG00000010249	RPUSD4	99	83.688	ENSETEG00000013953	RPUSD4	75	83.688	Echinops_telfairi
ENSCHOG00000010249	RPUSD4	100	84.806	ENSEASG00005022982	RPUSD4	75	84.806	Equus_asinus_asinus
ENSCHOG00000010249	RPUSD4	100	84.452	ENSECAG00000000557	RPUSD4	75	84.452	Equus_caballus
ENSCHOG00000010249	RPUSD4	98	56.989	ENSELUG00000008075	rpusd4	72	56.989	Esox_lucius
ENSCHOG00000010249	RPUSD4	100	84.452	ENSFCAG00000029789	RPUSD4	75	84.452	Felis_catus
ENSCHOG00000010249	RPUSD4	95	62.963	ENSFALG00000005171	RPUSD4	79	63.197	Ficedula_albicollis
ENSCHOG00000010249	RPUSD4	100	82.332	ENSFDAG00000014307	RPUSD4	76	82.332	Fukomys_damarensis
ENSCHOG00000010249	RPUSD4	94	52.941	ENSFHEG00000004329	rpusd4	70	52.941	Fundulus_heteroclitus
ENSCHOG00000010249	RPUSD4	94	50.185	ENSGMOG00000017726	rpusd4	81	50.185	Gadus_morhua
ENSCHOG00000010249	RPUSD4	94	63.806	ENSGALG00000024326	RPUSD4	76	63.806	Gallus_gallus
ENSCHOG00000010249	RPUSD4	94	49.265	ENSGAFG00000021559	rpusd4	69	49.265	Gambusia_affinis
ENSCHOG00000010249	RPUSD4	95	51.636	ENSGACG00000001657	rpusd4	95	51.636	Gasterosteus_aculeatus
ENSCHOG00000010249	RPUSD4	94	68.401	ENSGAGG00000000132	RPUSD4	75	68.401	Gopherus_agassizii
ENSCHOG00000010249	RPUSD4	100	82.332	ENSGGOG00000016494	RPUSD4	75	82.332	Gorilla_gorilla
ENSCHOG00000010249	RPUSD4	96	52.536	ENSHBUG00000022838	rpusd4	71	52.536	Haplochromis_burtoni
ENSCHOG00000010249	RPUSD4	100	81.979	ENSHGLG00000002285	RPUSD4	75	81.979	Heterocephalus_glaber_female
ENSCHOG00000010249	RPUSD4	100	81.979	ENSHGLG00100006385	RPUSD4	75	81.979	Heterocephalus_glaber_male
ENSCHOG00000010249	RPUSD4	96	53.069	ENSHCOG00000006612	rpusd4	70	53.069	Hippocampus_comes
ENSCHOG00000010249	RPUSD4	95	53.309	ENSIPUG00000023879	rusd4	70	53.309	Ictalurus_punctatus
ENSCHOG00000010249	RPUSD4	95	87.407	ENSSTOG00000025280	RPUSD4	74	87.407	Ictidomys_tridecemlineatus
ENSCHOG00000010249	RPUSD4	98	85.199	ENSJJAG00000018673	Rpusd4	75	85.199	Jaculus_jaculus
ENSCHOG00000010249	RPUSD4	96	55.235	ENSKMAG00000021805	rpusd4	72	55.235	Kryptolebias_marmoratus
ENSCHOG00000010249	RPUSD4	95	51.825	ENSLBEG00000020394	rpusd4	76	51.825	Labrus_bergylta
ENSCHOG00000010249	RPUSD4	95	65.926	ENSLACG00000011028	RPUSD4	68	65.926	Latimeria_chalumnae
ENSCHOG00000010249	RPUSD4	94	49.259	ENSLOCG00000003124	rpusd4	71	48.889	Lepisosteus_oculatus
ENSCHOG00000010249	RPUSD4	100	84.452	ENSLAFG00000005211	RPUSD4	99	73.077	Loxodonta_africana
ENSCHOG00000010249	RPUSD4	100	84.806	ENSMFAG00000039513	RPUSD4	75	84.806	Macaca_fascicularis
ENSCHOG00000010249	RPUSD4	100	84.452	ENSMMUG00000007933	RPUSD4	75	84.452	Macaca_mulatta
ENSCHOG00000010249	RPUSD4	100	84.452	ENSMNEG00000027414	RPUSD4	75	84.452	Macaca_nemestrina
ENSCHOG00000010249	RPUSD4	100	84.099	ENSMLEG00000042461	RPUSD4	75	84.099	Mandrillus_leucophaeus
ENSCHOG00000010249	RPUSD4	95	50.000	ENSMAMG00000023839	rpusd4	70	50.000	Mastacembelus_armatus
ENSCHOG00000010249	RPUSD4	96	52.536	ENSMZEG00005011999	rpusd4	71	52.536	Maylandia_zebra
ENSCHOG00000010249	RPUSD4	94	63.433	ENSMGAG00000000840	RPUSD4	83	63.433	Meleagris_gallopavo
ENSCHOG00000010249	RPUSD4	100	82.686	ENSMAUG00000010280	Rpusd4	75	82.686	Mesocricetus_auratus
ENSCHOG00000010249	RPUSD4	100	85.159	ENSMICG00000015979	RPUSD4	85	85.159	Microcebus_murinus
ENSCHOG00000010249	RPUSD4	98	81.227	ENSMOCG00000000661	Rpusd4	73	81.227	Microtus_ochrogaster
ENSCHOG00000010249	RPUSD4	96	53.069	ENSMMOG00000021731	rpusd4	82	53.069	Mola_mola
ENSCHOG00000010249	RPUSD4	89	80.237	ENSMODG00000004521	RPUSD4	65	80.237	Monodelphis_domestica
ENSCHOG00000010249	RPUSD4	96	50.725	ENSMALG00000005839	rpusd4	83	50.725	Monopterus_albus
ENSCHOG00000010249	RPUSD4	100	83.039	MGP_CAROLIEiJ_G0031954	Rpusd4	75	83.039	Mus_caroli
ENSCHOG00000010249	RPUSD4	99	82.857	ENSMUSG00000032044	Rpusd4	74	82.857	Mus_musculus
ENSCHOG00000010249	RPUSD4	100	82.686	MGP_PahariEiJ_G0014819	Rpusd4	75	82.686	Mus_pahari
ENSCHOG00000010249	RPUSD4	99	83.571	MGP_SPRETEiJ_G0033078	Rpusd4	74	83.571	Mus_spretus
ENSCHOG00000010249	RPUSD4	99	82.206	ENSMPUG00000006608	RPUSD4	75	82.206	Mustela_putorius_furo
ENSCHOG00000010249	RPUSD4	90	85.827	ENSMLUG00000029348	-	100	85.827	Myotis_lucifugus
ENSCHOG00000010249	RPUSD4	95	87.407	ENSMLUG00000017328	-	71	87.407	Myotis_lucifugus
ENSCHOG00000010249	RPUSD4	98	83.813	ENSNGAG00000020847	Rpusd4	74	83.813	Nannospalax_galili
ENSCHOG00000010249	RPUSD4	96	52.899	ENSNBRG00000005207	rpusd4	80	52.899	Neolamprologus_brichardi
ENSCHOG00000010249	RPUSD4	100	82.686	ENSNLEG00000007465	RPUSD4	75	82.686	Nomascus_leucogenys
ENSCHOG00000010249	RPUSD4	98	75.362	ENSMEUG00000004370	RPUSD4	74	75.362	Notamacropus_eugenii
ENSCHOG00000010249	RPUSD4	52	81.507	ENSOPRG00000013141	-	55	81.507	Ochotona_princeps
ENSCHOG00000010249	RPUSD4	100	82.332	ENSODEG00000004577	RPUSD4	75	82.332	Octodon_degus
ENSCHOG00000010249	RPUSD4	96	52.536	ENSONIG00000018879	rpusd4	74	52.536	Oreochromis_niloticus
ENSCHOG00000010249	RPUSD4	94	68.401	ENSOANG00000007247	RPUSD4	87	68.266	Ornithorhynchus_anatinus
ENSCHOG00000010249	RPUSD4	99	84.643	ENSOCUG00000017039	RPUSD4	74	84.643	Oryctolagus_cuniculus
ENSCHOG00000010249	RPUSD4	97	50.179	ENSORLG00000002750	rpusd4	76	50.179	Oryzias_latipes
ENSCHOG00000010249	RPUSD4	97	49.821	ENSORLG00020002044	rpusd4	69	49.821	Oryzias_latipes_hni
ENSCHOG00000010249	RPUSD4	97	50.179	ENSORLG00015020034	rpusd4	69	50.179	Oryzias_latipes_hsok
ENSCHOG00000010249	RPUSD4	100	50.865	ENSOMEG00000004861	rpusd4	71	50.865	Oryzias_melastigma
ENSCHOG00000010249	RPUSD4	100	85.159	ENSOGAG00000008922	RPUSD4	75	85.159	Otolemur_garnettii
ENSCHOG00000010249	RPUSD4	100	79.859	ENSOARG00000012238	RPUSD4	75	79.859	Ovis_aries
ENSCHOG00000010249	RPUSD4	100	82.332	ENSPPAG00000042883	RPUSD4	70	82.332	Pan_paniscus
ENSCHOG00000010249	RPUSD4	100	84.452	ENSPPRG00000003081	RPUSD4	75	84.452	Panthera_pardus
ENSCHOG00000010249	RPUSD4	100	84.452	ENSPTIG00000012059	RPUSD4	81	84.452	Panthera_tigris_altaica
ENSCHOG00000010249	RPUSD4	100	82.332	ENSPTRG00000004454	RPUSD4	75	82.332	Pan_troglodytes
ENSCHOG00000010249	RPUSD4	100	84.099	ENSPANG00000015040	RPUSD4	75	84.099	Papio_anubis
ENSCHOG00000010249	RPUSD4	95	61.029	ENSPKIG00000023986	rpusd4	70	61.029	Paramormyrops_kingsleyae
ENSCHOG00000010249	RPUSD4	94	67.658	ENSPSIG00000014268	RPUSD4	85	67.658	Pelodiscus_sinensis
ENSCHOG00000010249	RPUSD4	94	50.735	ENSPMGG00000002806	rpusd4	75	50.554	Periophthalmus_magnuspinnatus
ENSCHOG00000010249	RPUSD4	100	74.205	ENSPEMG00000000278	Rpusd4	74	74.205	Peromyscus_maniculatus_bairdii
ENSCHOG00000010249	RPUSD4	96	43.750	ENSPMAG00000008183	rpusd4	88	42.105	Petromyzon_marinus
ENSCHOG00000010249	RPUSD4	95	77.407	ENSPCIG00000010212	RPUSD4	74	77.407	Phascolarctos_cinereus
ENSCHOG00000010249	RPUSD4	94	50.365	ENSPFOG00000019030	rpusd4	71	50.365	Poecilia_formosa
ENSCHOG00000010249	RPUSD4	94	51.103	ENSPLAG00000016848	rpusd4	69	51.103	Poecilia_latipinna
ENSCHOG00000010249	RPUSD4	94	49.632	ENSPMEG00000017534	rpusd4	69	49.632	Poecilia_mexicana
ENSCHOG00000010249	RPUSD4	93	49.627	ENSPREG00000005689	rpusd4	69	49.627	Poecilia_reticulata
ENSCHOG00000010249	RPUSD4	100	83.039	ENSPPYG00000004043	RPUSD4	75	83.039	Pongo_abelii
ENSCHOG00000010249	RPUSD4	74	87.500	ENSPCAG00000000753	RPUSD4	57	87.500	Procavia_capensis
ENSCHOG00000010249	RPUSD4	98	78.339	ENSPCOG00000020694	RPUSD4	73	78.339	Propithecus_coquereli
ENSCHOG00000010249	RPUSD4	100	84.099	ENSPVAG00000000988	RPUSD4	75	84.099	Pteropus_vampyrus
ENSCHOG00000010249	RPUSD4	96	51.449	ENSPNYG00000009652	rpusd4	71	51.449	Pundamilia_nyererei
ENSCHOG00000010249	RPUSD4	95	50.368	ENSPNAG00000012264	rpusd4	72	50.368	Pygocentrus_nattereri
ENSCHOG00000010249	RPUSD4	99	83.571	ENSRNOG00000011567	Rpusd4	74	83.571	Rattus_norvegicus
ENSCHOG00000010249	RPUSD4	100	83.746	ENSRBIG00000034842	RPUSD4	75	83.746	Rhinopithecus_bieti
ENSCHOG00000010249	RPUSD4	100	83.746	ENSRROG00000039753	RPUSD4	75	83.746	Rhinopithecus_roxellana
ENSCHOG00000010249	RPUSD4	98	82.671	ENSSBOG00000030413	RPUSD4	74	82.671	Saimiri_boliviensis_boliviensis
ENSCHOG00000010249	RPUSD4	95	78.148	ENSSHAG00000008304	RPUSD4	89	78.148	Sarcophilus_harrisii
ENSCHOG00000010249	RPUSD4	95	62.132	ENSSFOG00015006203	rpusd4	73	62.132	Scleropages_formosus
ENSCHOG00000010249	RPUSD4	95	51.825	ENSSMAG00000020978	rpusd4	71	52.434	Scophthalmus_maximus
ENSCHOG00000010249	RPUSD4	94	49.815	ENSSDUG00000013399	rpusd4	71	49.815	Seriola_dumerili
ENSCHOG00000010249	RPUSD4	94	49.815	ENSSLDG00000023507	rpusd4	71	49.815	Seriola_lalandi_dorsalis
ENSCHOG00000010249	RPUSD4	95	67.647	ENSSPUG00000001401	RPUSD4	75	67.647	Sphenodon_punctatus
ENSCHOG00000010249	RPUSD4	95	55.273	ENSSPAG00000012163	rpusd4	70	55.273	Stegastes_partitus
ENSCHOG00000010249	RPUSD4	100	84.806	ENSSSCG00000015233	RPUSD4	75	84.806	Sus_scrofa
ENSCHOG00000010249	RPUSD4	94	63.197	ENSTGUG00000000773	RPUSD4	90	63.197	Taeniopygia_guttata
ENSCHOG00000010249	RPUSD4	96	52.536	ENSTRUG00000012283	rpusd4	71	52.536	Takifugu_rubripes
ENSCHOG00000010249	RPUSD4	96	51.264	ENSTNIG00000014676	rpusd4	71	51.264	Tetraodon_nigroviridis
ENSCHOG00000010249	RPUSD4	51	86.364	ENSTBEG00000014664	-	55	86.364	Tupaia_belangeri
ENSCHOG00000010249	RPUSD4	100	82.686	ENSTTRG00000001555	RPUSD4	75	82.686	Tursiops_truncatus
ENSCHOG00000010249	RPUSD4	54	79.221	ENSUAMG00000005500	-	96	79.221	Ursus_americanus
ENSCHOG00000010249	RPUSD4	98	84.477	ENSUMAG00000002219	RPUSD4	73	84.477	Ursus_maritimus
ENSCHOG00000010249	RPUSD4	60	88.304	ENSVPAG00000001066	RPUSD4	65	88.304	Vicugna_pacos
ENSCHOG00000010249	RPUSD4	100	84.452	ENSVVUG00000020101	RPUSD4	75	84.452	Vulpes_vulpes
ENSCHOG00000010249	RPUSD4	94	51.103	ENSXCOG00000004676	rpusd4	71	50.735	Xiphophorus_couchianus
ENSCHOG00000010249	RPUSD4	94	51.103	ENSXMAG00000023351	rpusd4	69	51.103	Xiphophorus_maculatus