EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000010522 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 32030 bases
Position: chrGeneScaffold_2399:1011-33040
Accession: 16792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000009326	EST1	PF10374.9	2.1e-23	1	1
ENSCHOP00000009326	EST1_DNA_bind	PF10373.9	7.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000010566	SMG7-201	3357	-	ENSCHOP00000009326	1119 (aa)	-	UPI0001FA02A2

Gene Model

Click here to download ENSCHOG00000010522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000010522's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000010522	SMG7	99	88.541	ENSG00000116698	SMG7	96	93.827	Homo_sapiens
ENSCHOG00000010522	SMG7	77	67.705	ENSAPOG00000009611	smg7	86	67.705	Acanthochromis_polyacanthus
ENSCHOG00000010522	SMG7	93	84.538	ENSAMEG00000002357	SMG7	95	84.081	Ailuropoda_melanoleuca
ENSCHOG00000010522	SMG7	93	56.447	ENSACIG00000015152	smg7	94	56.706	Amphilophus_citrinellus
ENSCHOG00000010522	SMG7	93	58.341	ENSAOCG00000013538	smg7	92	58.519	Amphiprion_ocellaris
ENSCHOG00000010522	SMG7	93	58.289	ENSAPEG00000007851	smg7	92	58.467	Amphiprion_percula
ENSCHOG00000010522	SMG7	88	62.921	ENSATEG00000006931	smg7	89	62.921	Anabas_testudineus
ENSCHOG00000010522	SMG7	93	78.344	ENSAPLG00000015811	SMG7	92	77.889	Anas_platyrhynchos
ENSCHOG00000010522	SMG7	93	76.588	ENSACAG00000014989	SMG7	92	76.679	Anolis_carolinensis
ENSCHOG00000010522	SMG7	98	88.395	ENSANAG00000028114	SMG7	95	87.645	Aotus_nancymaae
ENSCHOG00000010522	SMG7	88	63.043	ENSACLG00000022079	smg7	87	63.043	Astatotilapia_calliptera
ENSCHOG00000010522	SMG7	89	63.711	ENSAMXG00000020809	smg7	92	60.109	Astyanax_mexicanus
ENSCHOG00000010522	SMG7	93	87.870	ENSBTAG00000008003	SMG7	89	87.584	Bos_taurus
ENSCHOG00000010522	SMG7	99	87.914	ENSCJAG00000005135	SMG7	95	87.556	Callithrix_jacchus
ENSCHOG00000010522	SMG7	93	88.539	ENSCAFG00000013276	SMG7	89	88.061	Canis_familiaris
ENSCHOG00000010522	SMG7	93	88.539	ENSCAFG00020015475	SMG7	89	88.061	Canis_lupus_dingo
ENSCHOG00000010522	SMG7	93	87.966	ENSCHIG00000018192	SMG7	92	87.679	Capra_hircus
ENSCHOG00000010522	SMG7	99	87.108	ENSTSYG00000002667	SMG7	94	86.750	Carlito_syrichta
ENSCHOG00000010522	SMG7	93	88.443	ENSCPOG00000008906	SMG7	92	87.966	Cavia_porcellus
ENSCHOG00000010522	SMG7	93	85.910	ENSCCAG00000028596	SMG7	95	85.544	Cebus_capucinus
ENSCHOG00000010522	SMG7	93	89.971	ENSCATG00000011063	SMG7	95	85.819	Cercocebus_atys
ENSCHOG00000010522	SMG7	93	88.634	ENSCLAG00000010751	SMG7	92	88.252	Chinchilla_lanigera
ENSCHOG00000010522	SMG7	93	89.780	ENSCSAG00000012654	SMG7	89	89.398	Chlorocebus_sabaeus
ENSCHOG00000010522	SMG7	93	80.566	ENSCPBG00000015724	SMG7	92	80.109	Chrysemys_picta_bellii
ENSCHOG00000010522	SMG7	93	86.276	ENSCANG00000015680	SMG7	95	85.910	Colobus_angolensis_palliatus
ENSCHOG00000010522	SMG7	93	88.157	ENSCGRG00001013705	Smg7	92	87.870	Cricetulus_griseus_chok1gshd
ENSCHOG00000010522	SMG7	93	88.157	ENSCGRG00000018401	Smg7	91	87.870	Cricetulus_griseus_crigri
ENSCHOG00000010522	SMG7	86	64.242	ENSCVAG00000011842	smg7	93	63.636	Cyprinodon_variegatus
ENSCHOG00000010522	SMG7	89	63.079	ENSDARG00000060767	smg7	92	59.386	Danio_rerio
ENSCHOG00000010522	SMG7	93	87.870	ENSDORG00000007331	Smg7	92	87.488	Dipodomys_ordii
ENSCHOG00000010522	SMG7	93	88.230	ENSETEG00000002654	SMG7	95	87.847	Echinops_telfairi
ENSCHOG00000010522	SMG7	93	89.494	ENSEASG00005006524	SMG7	92	89.112	Equus_asinus_asinus
ENSCHOG00000010522	SMG7	87	97.834	ENSECAG00000004313	SMG7	89	97.491	Equus_caballus
ENSCHOG00000010522	SMG7	99	86.213	ENSEEUG00000002024	SMG7	95	85.855	Erinaceus_europaeus
ENSCHOG00000010522	SMG7	93	58.365	ENSELUG00000010293	smg7	94	57.923	Esox_lucius
ENSCHOG00000010522	SMG7	99	86.482	ENSFCAG00000010900	SMG7	96	88.061	Felis_catus
ENSCHOG00000010522	SMG7	93	75.364	ENSFALG00000003047	SMG7	93	74.909	Ficedula_albicollis
ENSCHOG00000010522	SMG7	93	88.825	ENSFDAG00000012121	SMG7	92	88.443	Fukomys_damarensis
ENSCHOG00000010522	SMG7	87	61.364	ENSFHEG00000011073	smg7	92	55.417	Fundulus_heteroclitus
ENSCHOG00000010522	SMG7	72	63.233	ENSGMOG00000004916	smg7	75	63.233	Gadus_morhua
ENSCHOG00000010522	SMG7	93	78.364	ENSGALG00000004667	SMG7	92	78.000	Gallus_gallus
ENSCHOG00000010522	SMG7	93	56.143	ENSGAFG00000019000	smg7	92	55.845	Gambusia_affinis
ENSCHOG00000010522	SMG7	87	62.222	ENSGACG00000001634	smg7	92	58.947	Gasterosteus_aculeatus
ENSCHOG00000010522	SMG7	93	89.780	ENSGGOG00000002342	SMG7	95	85.636	Gorilla_gorilla
ENSCHOG00000010522	SMG7	86	66.871	ENSHBUG00000003726	smg7	93	66.871	Haplochromis_burtoni
ENSCHOG00000010522	SMG7	93	88.921	ENSHGLG00000009353	SMG7	93	88.539	Heterocephalus_glaber_female
ENSCHOG00000010522	SMG7	93	81.662	ENSHGLG00100004878	-	91	81.202	Heterocephalus_glaber_male
ENSCHOG00000010522	SMG7	93	87.202	ENSHGLG00100009637	-	93	86.819	Heterocephalus_glaber_male
ENSCHOG00000010522	SMG7	93	59.745	ENSIPUG00000016997	smg7	93	59.836	Ictalurus_punctatus
ENSCHOG00000010522	SMG7	93	89.303	ENSSTOG00000000401	SMG7	92	88.921	Ictidomys_tridecemlineatus
ENSCHOG00000010522	SMG7	93	87.202	ENSJJAG00000012351	Smg7	92	86.819	Jaculus_jaculus
ENSCHOG00000010522	SMG7	86	64.242	ENSKMAG00000004900	smg7	91	64.242	Kryptolebias_marmoratus
ENSCHOG00000010522	SMG7	89	61.905	ENSLBEG00000002983	smg7	91	61.905	Labrus_bergylta
ENSCHOG00000010522	SMG7	89	73.684	ENSLACG00000000972	SMG7	87	73.684	Latimeria_chalumnae
ENSCHOG00000010522	SMG7	89	68.254	ENSLOCG00000002010	smg7	87	68.254	Lepisosteus_oculatus
ENSCHOG00000010522	SMG7	93	89.016	ENSLAFG00000008186	SMG7	92	88.634	Loxodonta_africana
ENSCHOG00000010522	SMG7	93	89.876	ENSMFAG00000031653	SMG7	92	89.494	Macaca_fascicularis
ENSCHOG00000010522	SMG7	99	88.630	ENSMMUG00000018458	SMG7	95	88.272	Macaca_mulatta
ENSCHOG00000010522	SMG7	93	86.185	ENSMNEG00000034798	SMG7	95	85.819	Macaca_nemestrina
ENSCHOG00000010522	SMG7	93	89.971	ENSMLEG00000037170	SMG7	95	85.819	Mandrillus_leucophaeus
ENSCHOG00000010522	SMG7	76	66.102	ENSMAMG00000018733	smg7	78	66.102	Mastacembelus_armatus
ENSCHOG00000010522	SMG7	88	63.043	ENSMZEG00005015247	smg7	87	63.043	Maylandia_zebra
ENSCHOG00000010522	SMG7	93	78.162	ENSMGAG00000001561	SMG7	92	77.707	Meleagris_gallopavo
ENSCHOG00000010522	SMG7	93	88.348	ENSMAUG00000019484	Smg7	92	88.061	Mesocricetus_auratus
ENSCHOG00000010522	SMG7	93	89.589	ENSMICG00000007145	SMG7	91	88.539	Microcebus_murinus
ENSCHOG00000010522	SMG7	93	87.966	ENSMOCG00000020748	Smg7	92	87.679	Microtus_ochrogaster
ENSCHOG00000010522	SMG7	86	65.244	ENSMMOG00000001524	smg7	89	65.244	Mola_mola
ENSCHOG00000010522	SMG7	89	82.263	ENSMODG00000007139	SMG7	94	81.879	Monodelphis_domestica
ENSCHOG00000010522	SMG7	93	57.909	ENSMALG00000000061	smg7	84	63.690	Monopterus_albus
ENSCHOG00000010522	SMG7	93	87.679	MGP_CAROLIEiJ_G0014704	Smg7	92	87.106	Mus_caroli
ENSCHOG00000010522	SMG7	93	87.488	ENSMUSG00000042772	Smg7	92	87.202	Mus_musculus
ENSCHOG00000010522	SMG7	93	87.584	MGP_PahariEiJ_G0027940	Smg7	92	87.297	Mus_pahari
ENSCHOG00000010522	SMG7	93	87.584	MGP_SPRETEiJ_G0015511	Smg7	92	87.297	Mus_spretus
ENSCHOG00000010522	SMG7	93	88.252	ENSMPUG00000011732	SMG7	90	87.775	Mustela_putorius_furo
ENSCHOG00000010522	SMG7	93	88.539	ENSMLUG00000015417	SMG7	92	88.157	Myotis_lucifugus
ENSCHOG00000010522	SMG7	93	87.966	ENSNGAG00000009836	Smg7	92	87.011	Nannospalax_galili
ENSCHOG00000010522	SMG7	84	64.571	ENSNBRG00000024343	smg7	90	64.205	Neolamprologus_brichardi
ENSCHOG00000010522	SMG7	93	89.971	ENSNLEG00000018018	SMG7	95	85.819	Nomascus_leucogenys
ENSCHOG00000010522	SMG7	74	75.000	ENSMEUG00000004681	SMG7	72	75.487	Notamacropus_eugenii
ENSCHOG00000010522	SMG7	100	75.446	ENSOPRG00000013942	SMG7	95	75.357	Ochotona_princeps
ENSCHOG00000010522	SMG7	93	88.921	ENSODEG00000010390	SMG7	92	88.539	Octodon_degus
ENSCHOG00000010522	SMG7	93	57.168	ENSONIG00000000277	smg7	92	57.524	Oreochromis_niloticus
ENSCHOG00000010522	SMG7	88	90.476	ENSOANG00000000994	SMG7	88	89.947	Ornithorhynchus_anatinus
ENSCHOG00000010522	SMG7	93	82.904	ENSOCUG00000005887	SMG7	85	82.521	Oryctolagus_cuniculus
ENSCHOG00000010522	SMG7	82	60.345	ENSORLG00000007314	smg7	91	54.874	Oryzias_latipes
ENSCHOG00000010522	SMG7	82	61.494	ENSORLG00020015779	smg7	91	55.415	Oryzias_latipes_hni
ENSCHOG00000010522	SMG7	81	64.417	ENSORLG00015012289	smg7	91	55.216	Oryzias_latipes_hsok
ENSCHOG00000010522	SMG7	82	60.988	ENSOMEG00000002328	smg7	86	58.947	Oryzias_melastigma
ENSCHOG00000010522	SMG7	99	86.929	ENSOGAG00000003107	SMG7	95	86.303	Otolemur_garnettii
ENSCHOG00000010522	SMG7	93	87.679	ENSOARG00000001352	SMG7	93	87.393	Ovis_aries
ENSCHOG00000010522	SMG7	93	86.185	ENSPPAG00000031619	SMG7	95	85.819	Pan_paniscus
ENSCHOG00000010522	SMG7	99	86.571	ENSPPRG00000011222	SMG7	94	86.124	Panthera_pardus
ENSCHOG00000010522	SMG7	99	86.571	ENSPTIG00000007242	SMG7	94	86.124	Panthera_tigris_altaica
ENSCHOG00000010522	SMG7	99	88.720	ENSPTRG00000001764	SMG7	95	88.362	Pan_troglodytes
ENSCHOG00000010522	SMG7	99	88.630	ENSPANG00000004520	SMG7	95	88.272	Papio_anubis
ENSCHOG00000010522	SMG7	89	59.893	ENSPKIG00000007242	smg7	91	60.606	Paramormyrops_kingsleyae
ENSCHOG00000010522	SMG7	93	84.160	ENSPSIG00000012201	SMG7	92	83.397	Pelodiscus_sinensis
ENSCHOG00000010522	SMG7	93	86.819	ENSPEMG00000011315	Smg7	92	86.533	Peromyscus_maniculatus_bairdii
ENSCHOG00000010522	SMG7	87	89.571	ENSPCIG00000003786	SMG7	91	88.957	Phascolarctos_cinereus
ENSCHOG00000010522	SMG7	89	59.375	ENSPFOG00000019219	smg7	87	59.375	Poecilia_formosa
ENSCHOG00000010522	SMG7	93	56.541	ENSPLAG00000001446	smg7	92	56.334	Poecilia_latipinna
ENSCHOG00000010522	SMG7	93	56.643	ENSPMEG00000005218	smg7	94	56.436	Poecilia_mexicana
ENSCHOG00000010522	SMG7	84	53.460	ENSPREG00000019039	smg7	86	53.707	Poecilia_reticulata
ENSCHOG00000010522	SMG7	93	86.276	ENSPPYG00000000427	SMG7	92	85.910	Pongo_abelii
ENSCHOG00000010522	SMG7	98	76.551	ENSPCAG00000008360	SMG7	95	76.186	Procavia_capensis
ENSCHOG00000010522	SMG7	99	88.720	ENSPCOG00000011996	SMG7	95	87.735	Propithecus_coquereli
ENSCHOG00000010522	SMG7	99	77.370	ENSPVAG00000000851	SMG7	95	77.013	Pteropus_vampyrus
ENSCHOG00000010522	SMG7	93	57.475	ENSPNYG00000007643	smg7	92	57.475	Pundamilia_nyererei
ENSCHOG00000010522	SMG7	93	59.819	ENSPNAG00000011374	smg7	90	64.417	Pygocentrus_nattereri
ENSCHOG00000010522	SMG7	93	87.405	ENSRNOG00000027962	Smg7	96	91.907	Rattus_norvegicus
ENSCHOG00000010522	SMG7	93	90.067	ENSRBIG00000036316	SMG7	95	85.910	Rhinopithecus_bieti
ENSCHOG00000010522	SMG7	93	90.067	ENSRROG00000035719	SMG7	92	89.685	Rhinopithecus_roxellana
ENSCHOG00000010522	SMG7	93	89.589	ENSSBOG00000023454	SMG7	92	89.207	Saimiri_boliviensis_boliviensis
ENSCHOG00000010522	SMG7	93	82.084	ENSSHAG00000013147	SMG7	92	81.461	Sarcophilus_harrisii
ENSCHOG00000010522	SMG7	86	70.323	ENSSFOG00015017252	smg7	92	70.323	Scleropages_formosus
ENSCHOG00000010522	SMG7	93	57.194	ENSSMAG00000006067	smg7	95	59.839	Scophthalmus_maximus
ENSCHOG00000010522	SMG7	93	57.332	ENSSDUG00000017543	smg7	89	64.375	Seriola_dumerili
ENSCHOG00000010522	SMG7	93	79.216	ENSSPUG00000002064	SMG7	92	78.851	Sphenodon_punctatus
ENSCHOG00000010522	SMG7	88	63.587	ENSSPAG00000008733	smg7	90	63.587	Stegastes_partitus
ENSCHOG00000010522	SMG7	93	89.016	ENSSSCG00000015558	SMG7	92	88.634	Sus_scrofa
ENSCHOG00000010522	SMG7	93	78.091	ENSTGUG00000003928	SMG7	92	77.636	Taeniopygia_guttata
ENSCHOG00000010522	SMG7	88	61.456	ENSTNIG00000002802	smg7	86	61.271	Tetraodon_nigroviridis
ENSCHOG00000010522	SMG7	72	92.593	ENSTBEG00000003220	SMG7	69	92.593	Tupaia_belangeri
ENSCHOG00000010522	SMG7	100	87.433	ENSTTRG00000014778	SMG7	96	87.166	Tursiops_truncatus
ENSCHOG00000010522	SMG7	93	88.443	ENSUAMG00000017473	SMG7	95	87.966	Ursus_americanus
ENSCHOG00000010522	SMG7	93	88.443	ENSUMAG00000016389	SMG7	95	87.966	Ursus_maritimus
ENSCHOG00000010522	SMG7	94	88.319	ENSVVUG00000008976	SMG7	91	92.336	Vulpes_vulpes
ENSCHOG00000010522	SMG7	93	62.399	ENSXETG00000012528	smg7	92	62.579	Xenopus_tropicalis
ENSCHOG00000010522	SMG7	93	56.429	ENSXMAG00000007123	smg7	92	56.491	Xiphophorus_maculatus