EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000010634 (Gene tree)
Gene ID: -
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 24969 bases
Position: chrGeneScaffold_384:159-25127
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000009405	MRP-S27	PF10037.9	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000010654	PTCD2-201	1041	-	ENSCHOP00000009405	347 (aa)	-	UPI0001FA0416

Gene Model

Click here to download ENSCHOG00000010634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000010634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000010634	PTCD2	100	60.632	ENSG00000049883	PTCD2	68	95.652	Homo_sapiens
ENSCHOG00000010634	PTCD2	73	54.706	ENSAPOG00000020682	ptcd2	67	54.706	Acanthochromis_polyacanthus
ENSCHOG00000010634	PTCD2	100	58.908	ENSAMEG00000007194	PTCD2	89	58.908	Ailuropoda_melanoleuca
ENSCHOG00000010634	PTCD2	79	49.412	ENSACIG00000002053	ptcd2	79	49.412	Amphilophus_citrinellus
ENSCHOG00000010634	PTCD2	73	54.118	ENSAOCG00000006616	ptcd2	65	54.118	Amphiprion_ocellaris
ENSCHOG00000010634	PTCD2	73	54.706	ENSAPEG00000022926	ptcd2	65	54.706	Amphiprion_percula
ENSCHOG00000010634	PTCD2	79	58.235	ENSACAG00000009747	PTCD2	71	58.235	Anolis_carolinensis
ENSCHOG00000010634	PTCD2	100	58.621	ENSANAG00000029353	PTCD2	89	58.621	Aotus_nancymaae
ENSCHOG00000010634	PTCD2	79	50.588	ENSACLG00000027742	ptcd2	71	50.588	Astatotilapia_calliptera
ENSCHOG00000010634	PTCD2	100	59.483	ENSBTAG00000014675	PTCD2	90	59.483	Bos_taurus
ENSCHOG00000010634	PTCD2	100	58.046	ENSCJAG00000016364	PTCD2	89	58.046	Callithrix_jacchus
ENSCHOG00000010634	PTCD2	100	57.759	ENSCAFG00000007982	PTCD2	81	57.759	Canis_familiaris
ENSCHOG00000010634	PTCD2	100	57.759	ENSCAFG00020019147	PTCD2	97	57.759	Canis_lupus_dingo
ENSCHOG00000010634	PTCD2	100	59.483	ENSCHIG00000017118	PTCD2	90	59.483	Capra_hircus
ENSCHOG00000010634	PTCD2	100	56.322	ENSCPOG00000040168	PTCD2	90	56.322	Cavia_porcellus
ENSCHOG00000010634	PTCD2	82	76.471	ENSCCAG00000029389	-	73	76.471	Cebus_capucinus
ENSCHOG00000010634	PTCD2	100	59.195	ENSCATG00000019069	PTCD2	90	59.195	Cercocebus_atys
ENSCHOG00000010634	PTCD2	100	58.621	ENSCLAG00000000072	PTCD2	90	58.621	Chinchilla_lanigera
ENSCHOG00000010634	PTCD2	100	59.195	ENSCSAG00000015623	PTCD2	90	59.195	Chlorocebus_sabaeus
ENSCHOG00000010634	PTCD2	79	62.941	ENSCPBG00000000216	PTCD2	78	62.941	Chrysemys_picta_bellii
ENSCHOG00000010634	PTCD2	100	58.908	ENSCANG00000035636	PTCD2	89	58.908	Colobus_angolensis_palliatus
ENSCHOG00000010634	PTCD2	100	54.598	ENSCGRG00001015289	Ptcd2	76	54.598	Cricetulus_griseus_chok1gshd
ENSCHOG00000010634	PTCD2	100	54.598	ENSCGRG00000006193	Ptcd2	76	54.598	Cricetulus_griseus_crigri
ENSCHOG00000010634	PTCD2	79	48.824	ENSCVAG00000001285	ptcd2	71	48.824	Cyprinodon_variegatus
ENSCHOG00000010634	PTCD2	77	53.529	ENSDARG00000035391	ptcd2	70	53.529	Danio_rerio
ENSCHOG00000010634	PTCD2	100	62.644	ENSDNOG00000008719	PTCD2	90	62.644	Dasypus_novemcinctus
ENSCHOG00000010634	PTCD2	100	59.770	ENSDORG00000004921	Ptcd2	89	59.770	Dipodomys_ordii
ENSCHOG00000010634	PTCD2	82	73.099	ENSETEG00000016542	PTCD2	73	73.099	Echinops_telfairi
ENSCHOG00000010634	PTCD2	100	58.908	ENSEASG00005018038	PTCD2	90	58.908	Equus_asinus_asinus
ENSCHOG00000010634	PTCD2	100	59.195	ENSECAG00000007022	PTCD2	89	59.195	Equus_caballus
ENSCHOG00000010634	PTCD2	100	54.885	ENSEEUG00000014031	PTCD2	89	54.885	Erinaceus_europaeus
ENSCHOG00000010634	PTCD2	77	53.529	ENSELUG00000003584	ptcd2	70	53.529	Esox_lucius
ENSCHOG00000010634	PTCD2	88	58.958	ENSFCAG00000045432	PTCD2	71	58.958	Felis_catus
ENSCHOG00000010634	PTCD2	67	64.844	ENSFALG00000010299	PTCD2	71	64.844	Ficedula_albicollis
ENSCHOG00000010634	PTCD2	100	57.471	ENSFDAG00000018461	PTCD2	90	57.471	Fukomys_damarensis
ENSCHOG00000010634	PTCD2	76	53.757	ENSGMOG00000003637	ptcd2	69	53.757	Gadus_morhua
ENSCHOG00000010634	PTCD2	79	56.471	ENSGALG00000038260	PTCD2	72	56.471	Gallus_gallus
ENSCHOG00000010634	PTCD2	79	64.118	ENSGAGG00000021952	PTCD2	71	64.118	Gopherus_agassizii
ENSCHOG00000010634	PTCD2	100	60.632	ENSGGOG00000010695	PTCD2	89	60.632	Gorilla_gorilla
ENSCHOG00000010634	PTCD2	79	50.000	ENSHBUG00000009191	ptcd2	71	50.000	Haplochromis_burtoni
ENSCHOG00000010634	PTCD2	100	57.471	ENSHGLG00000001234	PTCD2	90	57.471	Heterocephalus_glaber_female
ENSCHOG00000010634	PTCD2	100	57.471	ENSHGLG00100015419	PTCD2	90	57.471	Heterocephalus_glaber_male
ENSCHOG00000010634	PTCD2	73	52.353	ENSHCOG00000001703	ptcd2	66	52.353	Hippocampus_comes
ENSCHOG00000010634	PTCD2	100	58.453	ENSSTOG00000006596	PTCD2	90	58.453	Ictidomys_tridecemlineatus
ENSCHOG00000010634	PTCD2	100	56.034	ENSJJAG00000024388	Ptcd2	90	56.609	Jaculus_jaculus
ENSCHOG00000010634	PTCD2	79	48.824	ENSKMAG00000009329	ptcd2	75	48.824	Kryptolebias_marmoratus
ENSCHOG00000010634	PTCD2	79	48.235	ENSLBEG00000024871	ptcd2	71	48.235	Labrus_bergylta
ENSCHOG00000010634	PTCD2	78	60.000	ENSLOCG00000011122	ptcd2	71	60.000	Lepisosteus_oculatus
ENSCHOG00000010634	PTCD2	79	56.522	ENSLAFG00000004115	PTCD2	88	56.522	Loxodonta_africana
ENSCHOG00000010634	PTCD2	100	58.621	ENSMFAG00000031516	PTCD2	89	58.621	Macaca_fascicularis
ENSCHOG00000010634	PTCD2	100	58.908	ENSMNEG00000007537	PTCD2	90	58.908	Macaca_nemestrina
ENSCHOG00000010634	PTCD2	100	59.195	ENSMLEG00000031093	PTCD2	89	59.195	Mandrillus_leucophaeus
ENSCHOG00000010634	PTCD2	77	52.353	ENSMAMG00000018529	ptcd2	70	52.353	Mastacembelus_armatus
ENSCHOG00000010634	PTCD2	79	50.588	ENSMZEG00005003625	ptcd2	71	50.588	Maylandia_zebra
ENSCHOG00000010634	PTCD2	79	57.647	ENSMGAG00000005033	PTCD2	79	57.647	Meleagris_gallopavo
ENSCHOG00000010634	PTCD2	82	71.765	ENSMAUG00000020253	Ptcd2	89	71.765	Mesocricetus_auratus
ENSCHOG00000010634	PTCD2	82	75.294	ENSMICG00000004535	PTCD2	73	75.294	Microcebus_murinus
ENSCHOG00000010634	PTCD2	100	54.310	ENSMOCG00000019985	Ptcd2	91	54.310	Microtus_ochrogaster
ENSCHOG00000010634	PTCD2	100	46.839	ENSMODG00000001695	PTCD2	90	46.839	Monodelphis_domestica
ENSCHOG00000010634	PTCD2	77	51.176	ENSMALG00000022372	ptcd2	70	51.176	Monopterus_albus
ENSCHOG00000010634	PTCD2	82	71.765	MGP_CAROLIEiJ_G0018829	Ptcd2	74	71.765	Mus_caroli
ENSCHOG00000010634	PTCD2	82	71.765	ENSMUSG00000021650	Ptcd2	74	71.765	Mus_musculus
ENSCHOG00000010634	PTCD2	82	73.529	MGP_PahariEiJ_G0015904	Ptcd2	74	73.529	Mus_pahari
ENSCHOG00000010634	PTCD2	82	71.765	MGP_SPRETEiJ_G0019711	Ptcd2	74	71.765	Mus_spretus
ENSCHOG00000010634	PTCD2	100	58.621	ENSMPUG00000014401	PTCD2	90	58.621	Mustela_putorius_furo
ENSCHOG00000010634	PTCD2	100	56.897	ENSMLUG00000007374	PTCD2	89	56.897	Myotis_lucifugus
ENSCHOG00000010634	PTCD2	100	58.333	ENSNGAG00000005027	Ptcd2	90	58.333	Nannospalax_galili
ENSCHOG00000010634	PTCD2	79	50.588	ENSNBRG00000008174	ptcd2	72	50.588	Neolamprologus_brichardi
ENSCHOG00000010634	PTCD2	75	50.968	ENSNBRG00000000092	-	78	50.968	Neolamprologus_brichardi
ENSCHOG00000010634	PTCD2	100	58.908	ENSNLEG00000004516	PTCD2	89	58.908	Nomascus_leucogenys
ENSCHOG00000010634	PTCD2	57	76.000	ENSMEUG00000014012	-	52	76.000	Notamacropus_eugenii
ENSCHOG00000010634	PTCD2	82	73.529	ENSOPRG00000007290	PTCD2	73	73.529	Ochotona_princeps
ENSCHOG00000010634	PTCD2	100	57.471	ENSODEG00000016417	PTCD2	90	57.471	Octodon_degus
ENSCHOG00000010634	PTCD2	100	57.759	ENSOCUG00000007970	PTCD2	90	57.759	Oryctolagus_cuniculus
ENSCHOG00000010634	PTCD2	73	51.765	ENSORLG00000003851	ptcd2	70	51.765	Oryzias_latipes
ENSCHOG00000010634	PTCD2	73	51.176	ENSORLG00020009823	ptcd2	71	51.176	Oryzias_latipes_hni
ENSCHOG00000010634	PTCD2	73	50.588	ENSORLG00015016777	ptcd2	72	50.588	Oryzias_latipes_hsok
ENSCHOG00000010634	PTCD2	73	49.412	ENSOMEG00000012396	ptcd2	62	49.412	Oryzias_melastigma
ENSCHOG00000010634	PTCD2	100	57.759	ENSOGAG00000008390	PTCD2	89	57.759	Otolemur_garnettii
ENSCHOG00000010634	PTCD2	100	59.195	ENSOARG00000005087	PTCD2	89	59.195	Ovis_aries
ENSCHOG00000010634	PTCD2	100	60.345	ENSPPAG00000028480	PTCD2	89	60.345	Pan_paniscus
ENSCHOG00000010634	PTCD2	100	60.345	ENSPTRG00000016968	PTCD2	89	60.345	Pan_troglodytes
ENSCHOG00000010634	PTCD2	82	73.529	ENSPANG00000006611	PTCD2	73	73.529	Papio_anubis
ENSCHOG00000010634	PTCD2	78	55.294	ENSPKIG00000019896	ptcd2	71	55.294	Paramormyrops_kingsleyae
ENSCHOG00000010634	PTCD2	67	62.353	ENSPSIG00000014559	PTCD2	72	62.353	Pelodiscus_sinensis
ENSCHOG00000010634	PTCD2	100	53.714	ENSPEMG00000000884	Ptcd2	91	53.714	Peromyscus_maniculatus_bairdii
ENSCHOG00000010634	PTCD2	82	64.118	ENSPCIG00000029047	PTCD2	74	64.118	Phascolarctos_cinereus
ENSCHOG00000010634	PTCD2	71	50.588	ENSPLAG00000010456	ptcd2	70	50.588	Poecilia_latipinna
ENSCHOG00000010634	PTCD2	77	50.588	ENSPREG00000021797	ptcd2	68	50.588	Poecilia_reticulata
ENSCHOG00000010634	PTCD2	82	68.696	ENSPPYG00000015543	PTCD2	69	68.696	Pongo_abelii
ENSCHOG00000010634	PTCD2	79	51.825	ENSPCAG00000006806	PTCD2	86	51.825	Procavia_capensis
ENSCHOG00000010634	PTCD2	100	55.460	ENSPVAG00000010935	PTCD2	89	55.460	Pteropus_vampyrus
ENSCHOG00000010634	PTCD2	79	50.000	ENSPNYG00000003122	ptcd2	71	50.000	Pundamilia_nyererei
ENSCHOG00000010634	PTCD2	74	53.529	ENSPNAG00000021490	ptcd2	67	53.529	Pygocentrus_nattereri
ENSCHOG00000010634	PTCD2	100	57.759	ENSRNOG00000028403	Ptcd2	91	57.759	Rattus_norvegicus
ENSCHOG00000010634	PTCD2	100	53.736	ENSRBIG00000032929	PTCD2	88	53.736	Rhinopithecus_bieti
ENSCHOG00000010634	PTCD2	100	58.908	ENSRROG00000000080	PTCD2	90	58.908	Rhinopithecus_roxellana
ENSCHOG00000010634	PTCD2	100	56.609	ENSSBOG00000018911	PTCD2	90	56.609	Saimiri_boliviensis_boliviensis
ENSCHOG00000010634	PTCD2	100	48.276	ENSSHAG00000003833	PTCD2	89	48.276	Sarcophilus_harrisii
ENSCHOG00000010634	PTCD2	74	51.765	ENSSFOG00015015415	ptcd2	67	51.765	Scleropages_formosus
ENSCHOG00000010634	PTCD2	79	52.941	ENSSMAG00000010350	ptcd2	72	52.941	Scophthalmus_maximus
ENSCHOG00000010634	PTCD2	73	53.529	ENSSDUG00000008142	ptcd2	64	53.529	Seriola_dumerili
ENSCHOG00000010634	PTCD2	73	53.529	ENSSLDG00000015284	ptcd2	67	53.529	Seriola_lalandi_dorsalis
ENSCHOG00000010634	PTCD2	61	75.294	ENSSARG00000004983	PTCD2	67	75.294	Sorex_araneus
ENSCHOG00000010634	PTCD2	79	57.647	ENSSPUG00000000176	PTCD2	69	57.647	Sphenodon_punctatus
ENSCHOG00000010634	PTCD2	79	55.294	ENSSPAG00000008591	ptcd2	70	55.294	Stegastes_partitus
ENSCHOG00000010634	PTCD2	100	58.621	ENSSSCG00000016975	PTCD2	81	58.621	Sus_scrofa
ENSCHOG00000010634	PTCD2	74	58.235	ENSTGUG00000005705	PTCD2	75	58.235	Taeniopygia_guttata
ENSCHOG00000010634	PTCD2	100	54.598	ENSTBEG00000016559	PTCD2	89	55.172	Tupaia_belangeri
ENSCHOG00000010634	PTCD2	100	58.621	ENSTTRG00000011851	PTCD2	89	58.621	Tursiops_truncatus
ENSCHOG00000010634	PTCD2	100	58.621	ENSUAMG00000007583	PTCD2	81	58.621	Ursus_americanus
ENSCHOG00000010634	PTCD2	100	58.621	ENSUMAG00000007666	PTCD2	90	58.621	Ursus_maritimus
ENSCHOG00000010634	PTCD2	100	58.046	ENSVPAG00000009597	PTCD2	89	58.046	Vicugna_pacos
ENSCHOG00000010634	PTCD2	100	57.759	ENSVVUG00000007299	-	90	57.759	Vulpes_vulpes
ENSCHOG00000010634	PTCD2	82	59.412	ENSXETG00000031652	PTCD2	74	59.412	Xenopus_tropicalis
ENSCHOG00000010634	PTCD2	71	50.588	ENSXMAG00000005940	ptcd2	64	50.588	Xiphophorus_maculatus