EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000010946 (Gene tree)
Gene ID: -
Gene Symbol: LSM11
Alias: FLJ38273
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 2996 bases
Position: chrscaffold_2802:29374-32369
Accession: 30860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000009685	LSM	PF01423.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000010968	LSM11-201	633	-	ENSCHOP00000009685	210 (aa)	-	UPI0001FA0268

Gene Model

Click here to download ENSCHOG00000010946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000010946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000010946	LSM11	100	94.762	ENSCAPG00000009739	LSM11	100	94.762	Cavia_aperea
ENSCHOG00000010946	LSM11	100	94.762	ENSCPOG00000000906	LSM11	99	94.762	Cavia_porcellus
ENSCHOG00000010946	LSM11	100	93.810	ENSCLAG00000017067	LSM11	90	93.810	Chinchilla_lanigera
ENSCHOG00000010946	LSM11	100	94.762	ENSCANG00000040781	LSM11	100	94.762	Colobus_angolensis_palliatus
ENSCHOG00000010946	LSM11	100	94.762	ENSCGRG00000000197	Lsm11	95	94.762	Cricetulus_griseus_crigri
ENSCHOG00000010946	LSM11	98	40.488	ENSCSEG00000019951	lsm11	50	40.291	Cynoglossus_semilaevis
ENSCHOG00000010946	LSM11	100	93.810	ENSEEUG00000010814	LSM11	100	93.810	Erinaceus_europaeus
ENSCHOG00000010946	LSM11	100	95.238	ENSMLEG00000027420	LSM11	100	95.238	Mandrillus_leucophaeus
ENSCHOG00000010946	LSM11	100	71.905	ENSMLUG00000015930	LSM11	95	71.905	Myotis_lucifugus
ENSCHOG00000010946	LSM11	100	94.762	ENSOGAG00000009059	LSM11	99	94.762	Otolemur_garnettii
ENSCHOG00000010946	LSM11	99	62.500	ENSPSIG00000005234	LSM11	99	59.259	Pelodiscus_sinensis
ENSCHOG00000010946	LSM11	98	40.777	ENSPLAG00000019434	lsm11	50	36.493	Poecilia_latipinna
ENSCHOG00000010946	LSM11	100	92.381	ENSPCAG00000016360	LSM11	99	92.381	Procavia_capensis
ENSCHOG00000010946	LSM11	100	94.762	ENSTBEG00000000992	LSM11	100	94.762	Tupaia_belangeri