EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000011377 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 27338 bases
Position: chrGeneScaffold_6029:2663-30000
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010080	CPSF_A	PF03178.15	8.9e-67	1	2
ENSCHOP00000010080	CPSF_A	PF03178.15	8.9e-67	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000011429	DDB1-201	3291	-	ENSCHOP00000010080	1097 (aa)	-	UPI0001FA049B

Gene Model

Click here to download ENSCHOG00000011377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000011377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000011377	DDB1	90	92.803	ENSG00000167986	DDB1	100	97.849	Homo_sapiens
ENSCHOG00000011377	DDB1	90	84.470	ENSAPOG00000005036	ddb1	85	90.808	Acanthochromis_polyacanthus
ENSCHOG00000011377	DDB1	90	92.803	ENSAMEG00000016518	DDB1	88	92.803	Ailuropoda_melanoleuca
ENSCHOG00000011377	DDB1	74	91.643	ENSACIG00000020624	ddb1	85	91.643	Amphilophus_citrinellus
ENSCHOG00000011377	DDB1	90	84.470	ENSAOCG00000003066	ddb1	88	84.470	Amphiprion_ocellaris
ENSCHOG00000011377	DDB1	90	84.470	ENSAPEG00000000092	ddb1	88	84.470	Amphiprion_percula
ENSCHOG00000011377	DDB1	86	84.286	ENSATEG00000020571	ddb1	85	91.365	Anabas_testudineus
ENSCHOG00000011377	DDB1	88	90.395	ENSAPLG00000007174	DDB1	86	90.395	Anas_platyrhynchos
ENSCHOG00000011377	DDB1	90	91.098	ENSACAG00000017758	DDB1	88	91.098	Anolis_carolinensis
ENSCHOG00000011377	DDB1	90	92.803	ENSANAG00000021878	DDB1	88	92.803	Aotus_nancymaae
ENSCHOG00000011377	DDB1	90	85.038	ENSACLG00000012401	ddb1	87	88.997	Astatotilapia_calliptera
ENSCHOG00000011377	DDB1	90	92.803	ENSBTAG00000021569	DDB1	82	92.803	Bos_taurus
ENSCHOG00000011377	DDB1	89	37.848	WBGene00010890	ddb-1	86	37.593	Caenorhabditis_elegans
ENSCHOG00000011377	DDB1	90	92.803	ENSCJAG00000019319	DDB1	88	92.803	Callithrix_jacchus
ENSCHOG00000011377	DDB1	90	92.803	ENSCAFG00000016264	DDB1	88	92.803	Canis_familiaris
ENSCHOG00000011377	DDB1	86	91.633	ENSCAFG00020012722	DDB1	89	91.633	Canis_lupus_dingo
ENSCHOG00000011377	DDB1	90	92.803	ENSCHIG00000014969	DDB1	88	92.803	Capra_hircus
ENSCHOG00000011377	DDB1	90	92.235	ENSTSYG00000008027	DDB1	88	92.235	Carlito_syrichta
ENSCHOG00000011377	DDB1	89	91.288	ENSCAPG00000010786	DDB1	87	92.235	Cavia_aperea
ENSCHOG00000011377	DDB1	90	92.235	ENSCPOG00000009956	DDB1	88	92.235	Cavia_porcellus
ENSCHOG00000011377	DDB1	90	92.803	ENSCCAG00000035883	DDB1	88	92.803	Cebus_capucinus
ENSCHOG00000011377	DDB1	90	90.720	ENSCATG00000044495	DDB1	88	90.720	Cercocebus_atys
ENSCHOG00000011377	DDB1	90	92.235	ENSCLAG00000004126	DDB1	88	92.235	Chinchilla_lanigera
ENSCHOG00000011377	DDB1	90	92.803	ENSCSAG00000006392	DDB1	88	92.803	Chlorocebus_sabaeus
ENSCHOG00000011377	DDB1	90	91.477	ENSCPBG00000017728	DDB1	88	91.477	Chrysemys_picta_bellii
ENSCHOG00000011377	DDB1	89	58.523	ENSCING00000007437	-	87	58.333	Ciona_intestinalis
ENSCHOG00000011377	DDB1	83	54.717	ENSCSAVG00000004783	-	85	59.554	Ciona_savignyi
ENSCHOG00000011377	DDB1	90	92.803	ENSCANG00000019948	DDB1	88	92.803	Colobus_angolensis_palliatus
ENSCHOG00000011377	DDB1	90	92.803	ENSCGRG00001016599	Ddb1	88	92.803	Cricetulus_griseus_chok1gshd
ENSCHOG00000011377	DDB1	90	92.803	ENSCGRG00000013427	Ddb1	88	92.803	Cricetulus_griseus_crigri
ENSCHOG00000011377	DDB1	85	84.034	ENSCSEG00000012499	ddb1	85	90.808	Cynoglossus_semilaevis
ENSCHOG00000011377	DDB1	86	84.016	ENSCVAG00000019531	ddb1	89	84.016	Cyprinodon_variegatus
ENSCHOG00000011377	DDB1	90	84.877	ENSDARG00000074431	ddb1	87	84.877	Danio_rerio
ENSCHOG00000011377	DDB1	86	91.429	ENSDNOG00000014884	DDB1	87	91.429	Dasypus_novemcinctus
ENSCHOG00000011377	DDB1	73	98.361	ENSDORG00000000127	Ddb1	84	98.361	Dipodomys_ordii
ENSCHOG00000011377	DDB1	90	60.526	FBgn0260962	pic	88	60.075	Drosophila_melanogaster
ENSCHOG00000011377	DDB1	61	88.301	ENSETEG00000001053	-	60	88.301	Echinops_telfairi
ENSCHOG00000011377	DDB1	69	82.895	ENSEBUG00000014593	ddb1	85	82.895	Eptatretus_burgeri
ENSCHOG00000011377	DDB1	90	92.614	ENSEASG00005008184	DDB1	88	92.614	Equus_asinus_asinus
ENSCHOG00000011377	DDB1	90	92.424	ENSECAG00000012136	DDB1	88	92.424	Equus_caballus
ENSCHOG00000011377	DDB1	76	89.144	ENSEEUG00000003194	DDB1	75	89.144	Erinaceus_europaeus
ENSCHOG00000011377	DDB1	90	84.470	ENSELUG00000023868	ddb1	88	84.470	Esox_lucius
ENSCHOG00000011377	DDB1	90	92.803	ENSFCAG00000029716	DDB1	88	92.803	Felis_catus
ENSCHOG00000011377	DDB1	90	90.395	ENSFALG00000011981	DDB1	88	90.395	Ficedula_albicollis
ENSCHOG00000011377	DDB1	90	92.424	ENSFDAG00000005128	DDB1	88	92.424	Fukomys_damarensis
ENSCHOG00000011377	DDB1	80	84.737	ENSFHEG00000022133	ddb1	84	89.205	Fundulus_heteroclitus
ENSCHOG00000011377	DDB1	67	91.340	ENSGMOG00000019386	ddb1	78	91.340	Gadus_morhua
ENSCHOG00000011377	DDB1	90	90.909	ENSGALG00000042333	DDB1	88	90.909	Gallus_gallus
ENSCHOG00000011377	DDB1	86	83.607	ENSGAFG00000013142	ddb1	89	83.607	Gambusia_affinis
ENSCHOG00000011377	DDB1	88	82.806	ENSGACG00000017182	ddb1	89	82.806	Gasterosteus_aculeatus
ENSCHOG00000011377	DDB1	84	91.477	ENSGAGG00000014124	DDB1	87	91.477	Gopherus_agassizii
ENSCHOG00000011377	DDB1	90	92.803	ENSGGOG00000004052	DDB1	88	92.803	Gorilla_gorilla
ENSCHOG00000011377	DDB1	90	85.038	ENSHBUG00000008873	ddb1	88	85.038	Haplochromis_burtoni
ENSCHOG00000011377	DDB1	90	92.424	ENSHGLG00000018430	DDB1	88	92.424	Heterocephalus_glaber_female
ENSCHOG00000011377	DDB1	90	90.720	ENSHGLG00100014475	DDB1	87	90.720	Heterocephalus_glaber_male
ENSCHOG00000011377	DDB1	86	83.910	ENSHCOG00000018670	ddb1	88	83.910	Hippocampus_comes
ENSCHOG00000011377	DDB1	90	84.280	ENSIPUG00000005612	DDB1	88	84.280	Ictalurus_punctatus
ENSCHOG00000011377	DDB1	90	92.803	ENSSTOG00000007552	DDB1	88	92.803	Ictidomys_tridecemlineatus
ENSCHOG00000011377	DDB1	90	92.424	ENSJJAG00000017769	Ddb1	88	92.424	Jaculus_jaculus
ENSCHOG00000011377	DDB1	86	83.811	ENSKMAG00000002315	ddb1	89	83.811	Kryptolebias_marmoratus
ENSCHOG00000011377	DDB1	73	91.365	ENSLBEG00000017065	ddb1	84	91.365	Labrus_bergylta
ENSCHOG00000011377	DDB1	90	87.547	ENSLACG00000017611	DDB1	88	87.547	Latimeria_chalumnae
ENSCHOG00000011377	DDB1	77	93.458	ENSLOCG00000000012	ddb1	82	93.458	Lepisosteus_oculatus
ENSCHOG00000011377	DDB1	90	92.803	ENSLAFG00000011513	DDB1	88	92.803	Loxodonta_africana
ENSCHOG00000011377	DDB1	90	92.803	ENSMFAG00000042035	DDB1	88	92.803	Macaca_fascicularis
ENSCHOG00000011377	DDB1	90	92.803	ENSMMUG00000002691	DDB1	100	97.849	Macaca_mulatta
ENSCHOG00000011377	DDB1	90	92.803	ENSMNEG00000031559	DDB1	88	92.803	Macaca_nemestrina
ENSCHOG00000011377	DDB1	90	92.803	ENSMLEG00000044136	DDB1	88	92.803	Mandrillus_leucophaeus
ENSCHOG00000011377	DDB1	90	84.848	ENSMAMG00000014372	ddb1	88	84.848	Mastacembelus_armatus
ENSCHOG00000011377	DDB1	90	84.848	ENSMZEG00005013835	ddb1	88	84.848	Maylandia_zebra
ENSCHOG00000011377	DDB1	83	90.395	ENSMGAG00000004990	DDB1	87	90.395	Meleagris_gallopavo
ENSCHOG00000011377	DDB1	90	92.803	ENSMAUG00000012926	Ddb1	88	92.803	Mesocricetus_auratus
ENSCHOG00000011377	DDB1	90	92.803	ENSMICG00000013703	DDB1	88	92.803	Microcebus_murinus
ENSCHOG00000011377	DDB1	90	92.803	ENSMOCG00000020499	Ddb1	88	92.803	Microtus_ochrogaster
ENSCHOG00000011377	DDB1	74	91.643	ENSMMOG00000001758	ddb1	85	91.643	Mola_mola
ENSCHOG00000011377	DDB1	90	89.094	ENSMODG00000020353	DDB1	88	89.094	Monodelphis_domestica
ENSCHOG00000011377	DDB1	90	84.848	ENSMALG00000014071	ddb1	88	84.848	Monopterus_albus
ENSCHOG00000011377	DDB1	90	92.614	MGP_CAROLIEiJ_G0022695	Ddb1	88	92.614	Mus_caroli
ENSCHOG00000011377	DDB1	90	92.424	ENSMUSG00000024740	Ddb1	88	92.424	Mus_musculus
ENSCHOG00000011377	DDB1	90	92.614	MGP_PahariEiJ_G0014189	Ddb1	88	92.614	Mus_pahari
ENSCHOG00000011377	DDB1	90	92.614	MGP_SPRETEiJ_G0023609	Ddb1	88	92.614	Mus_spretus
ENSCHOG00000011377	DDB1	90	86.932	ENSMPUG00000014200	DDB1	87	86.932	Mustela_putorius_furo
ENSCHOG00000011377	DDB1	90	92.424	ENSMLUG00000013232	DDB1	88	92.424	Myotis_lucifugus
ENSCHOG00000011377	DDB1	90	92.235	ENSNGAG00000009384	Ddb1	88	92.235	Nannospalax_galili
ENSCHOG00000011377	DDB1	90	85.227	ENSNBRG00000019581	ddb1	88	85.227	Neolamprologus_brichardi
ENSCHOG00000011377	DDB1	90	91.856	ENSNLEG00000002022	DDB1	88	91.856	Nomascus_leucogenys
ENSCHOG00000011377	DDB1	79	98.864	ENSMEUG00000001099	DDB1	79	98.864	Notamacropus_eugenii
ENSCHOG00000011377	DDB1	71	100.000	ENSOPRG00000008254	DDB1	69	100.000	Ochotona_princeps
ENSCHOG00000011377	DDB1	90	92.045	ENSODEG00000002419	DDB1	88	92.045	Octodon_degus
ENSCHOG00000011377	DDB1	90	85.038	ENSONIG00000005804	ddb1	88	85.038	Oreochromis_niloticus
ENSCHOG00000011377	DDB1	79	91.667	ENSOANG00000004897	DDB1	86	91.667	Ornithorhynchus_anatinus
ENSCHOG00000011377	DDB1	90	92.614	ENSOCUG00000001667	DDB1	88	92.614	Oryctolagus_cuniculus
ENSCHOG00000011377	DDB1	88	81.621	ENSORLG00000001399	ddb1	87	83.553	Oryzias_latipes
ENSCHOG00000011377	DDB1	88	81.621	ENSORLG00020001277	ddb1	87	81.621	Oryzias_latipes_hni
ENSCHOG00000011377	DDB1	86	83.673	ENSORLG00015002080	ddb1	88	83.673	Oryzias_latipes_hsok
ENSCHOG00000011377	DDB1	88	81.055	ENSOMEG00000006181	ddb1	86	85.574	Oryzias_melastigma
ENSCHOG00000011377	DDB1	90	92.803	ENSOGAG00000016103	DDB1	88	92.803	Otolemur_garnettii
ENSCHOG00000011377	DDB1	90	92.803	ENSOARG00000011716	DDB1	87	92.803	Ovis_aries
ENSCHOG00000011377	DDB1	90	92.803	ENSPPAG00000035343	DDB1	88	92.803	Pan_paniscus
ENSCHOG00000011377	DDB1	90	92.803	ENSPPRG00000013300	DDB1	88	92.803	Panthera_pardus
ENSCHOG00000011377	DDB1	88	92.803	ENSPTIG00000006909	DDB1	86	92.803	Panthera_tigris_altaica
ENSCHOG00000011377	DDB1	90	92.803	ENSPTRG00000003737	DDB1	88	92.803	Pan_troglodytes
ENSCHOG00000011377	DDB1	90	92.803	ENSPANG00000000242	DDB1	88	92.803	Papio_anubis
ENSCHOG00000011377	DDB1	86	84.016	ENSPKIG00000019213	ddb1	84	84.016	Paramormyrops_kingsleyae
ENSCHOG00000011377	DDB1	88	90.943	ENSPSIG00000013275	DDB1	87	90.943	Pelodiscus_sinensis
ENSCHOG00000011377	DDB1	74	91.365	ENSPMGG00000021179	ddb1	85	91.365	Periophthalmus_magnuspinnatus
ENSCHOG00000011377	DDB1	90	92.803	ENSPEMG00000012241	Ddb1	88	92.803	Peromyscus_maniculatus_bairdii
ENSCHOG00000011377	DDB1	81	80.353	ENSPMAG00000008479	ddb1	89	80.353	Petromyzon_marinus
ENSCHOG00000011377	DDB1	90	92.045	ENSPCIG00000002643	DDB1	88	92.045	Phascolarctos_cinereus
ENSCHOG00000011377	DDB1	89	83.902	ENSPFOG00000002768	ddb1	87	83.902	Poecilia_formosa
ENSCHOG00000011377	DDB1	89	83.491	ENSPLAG00000017227	ddb1	88	83.673	Poecilia_latipinna
ENSCHOG00000011377	DDB1	89	83.491	ENSPMEG00000011398	ddb1	88	83.673	Poecilia_mexicana
ENSCHOG00000011377	DDB1	86	83.673	ENSPREG00000004440	ddb1	87	83.673	Poecilia_reticulata
ENSCHOG00000011377	DDB1	89	87.054	ENSPPYG00000003193	DDB1	88	87.054	Pongo_abelii
ENSCHOG00000011377	DDB1	71	92.614	ENSPCAG00000011040	DDB1	69	92.614	Procavia_capensis
ENSCHOG00000011377	DDB1	90	89.434	ENSPCOG00000015176	DDB1	88	89.434	Propithecus_coquereli
ENSCHOG00000011377	DDB1	90	92.803	ENSPVAG00000003847	DDB1	88	92.803	Pteropus_vampyrus
ENSCHOG00000011377	DDB1	86	84.221	ENSPNAG00000006635	ddb1	87	84.221	Pygocentrus_nattereri
ENSCHOG00000011377	DDB1	90	92.803	ENSRNOG00000020715	Ddb1	88	92.803	Rattus_norvegicus
ENSCHOG00000011377	DDB1	90	92.803	ENSRBIG00000033611	DDB1	88	92.803	Rhinopithecus_bieti
ENSCHOG00000011377	DDB1	90	92.803	ENSRROG00000041407	DDB1	88	92.803	Rhinopithecus_roxellana
ENSCHOG00000011377	DDB1	90	92.614	ENSSBOG00000019775	DDB1	88	92.614	Saimiri_boliviensis_boliviensis
ENSCHOG00000011377	DDB1	83	92.235	ENSSHAG00000011600	DDB1	87	92.235	Sarcophilus_harrisii
ENSCHOG00000011377	DDB1	86	84.521	ENSSFOG00015011151	ddb1	86	84.521	Scleropages_formosus
ENSCHOG00000011377	DDB1	90	84.659	ENSSMAG00000009495	ddb1	88	84.659	Scophthalmus_maximus
ENSCHOG00000011377	DDB1	90	84.848	ENSSDUG00000004642	ddb1	88	84.848	Seriola_dumerili
ENSCHOG00000011377	DDB1	90	84.848	ENSSLDG00000015804	ddb1	88	84.848	Seriola_lalandi_dorsalis
ENSCHOG00000011377	DDB1	57	100.000	ENSSARG00000003290	-	56	100.000	Sorex_araneus
ENSCHOG00000011377	DDB1	90	91.288	ENSSPUG00000019338	DDB1	88	91.288	Sphenodon_punctatus
ENSCHOG00000011377	DDB1	86	84.082	ENSSPAG00000009888	ddb1	82	91.667	Stegastes_partitus
ENSCHOG00000011377	DDB1	90	90.909	ENSSSCG00000013094	DDB1	87	90.909	Sus_scrofa
ENSCHOG00000011377	DDB1	90	89.773	ENSTGUG00000006414	DDB1	88	89.773	Taeniopygia_guttata
ENSCHOG00000011377	DDB1	86	82.582	ENSTRUG00000016682	ddb1	85	89.415	Takifugu_rubripes
ENSCHOG00000011377	DDB1	77	76.038	ENSTNIG00000009565	ddb1	86	76.038	Tetraodon_nigroviridis
ENSCHOG00000011377	DDB1	76	98.361	ENSTTRG00000011055	DDB1	76	98.361	Tursiops_truncatus
ENSCHOG00000011377	DDB1	86	91.633	ENSUAMG00000017793	DDB1	83	91.633	Ursus_americanus
ENSCHOG00000011377	DDB1	86	91.633	ENSUMAG00000011788	DDB1	87	91.633	Ursus_maritimus
ENSCHOG00000011377	DDB1	79	100.000	ENSVPAG00000007963	DDB1	79	100.000	Vicugna_pacos
ENSCHOG00000011377	DDB1	90	92.614	ENSVVUG00000004987	DDB1	88	92.614	Vulpes_vulpes
ENSCHOG00000011377	DDB1	90	87.970	ENSXETG00000008820	ddb1	88	87.970	Xenopus_tropicalis
ENSCHOG00000011377	DDB1	74	90.808	ENSXCOG00000013956	ddb1	85	90.808	Xiphophorus_couchianus
ENSCHOG00000011377	DDB1	86	83.811	ENSXMAG00000000022	ddb1	89	83.811	Xiphophorus_maculatus