EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000011432 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 26134 bases
Position: chrGeneScaffold_1532:714-26847
Accession: 30129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010114	POP1	PF06978.11	1.9e-38	1	2
ENSCHOP00000010114	POP1	PF06978.11	1.9e-38	2	2
ENSCHOP00000010114	POPLD	PF08170.12	1.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000011467	POP1-201	2880	-	ENSCHOP00000010114	959 (aa)	-	UPI0001FA02D6

Gene Model

Click here to download ENSCHOG00000011432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000011432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000011432	POP1	100	80.225	ENSG00000104356	POP1	95	80.635	Homo_sapiens
ENSCHOG00000011432	POP1	96	47.336	ENSAPOG00000008198	pop1	94	47.336	Acanthochromis_polyacanthus
ENSCHOG00000011432	POP1	96	86.287	ENSAMEG00000000556	POP1	87	86.287	Ailuropoda_melanoleuca
ENSCHOG00000011432	POP1	94	47.821	ENSACIG00000004169	POP1	93	47.609	Amphilophus_citrinellus
ENSCHOG00000011432	POP1	96	46.516	ENSAOCG00000010991	pop1	94	46.516	Amphiprion_ocellaris
ENSCHOG00000011432	POP1	96	44.990	ENSAPEG00000007607	pop1	99	44.501	Amphiprion_percula
ENSCHOG00000011432	POP1	96	45.697	ENSATEG00000024814	POP1	95	45.902	Anabas_testudineus
ENSCHOG00000011432	POP1	96	58.898	ENSAPLG00000014418	POP1	99	58.581	Anas_platyrhynchos
ENSCHOG00000011432	POP1	99	53.947	ENSACAG00000016083	POP1	95	54.070	Anolis_carolinensis
ENSCHOG00000011432	POP1	88	91.349	ENSANAG00000026360	POP1	96	91.349	Aotus_nancymaae
ENSCHOG00000011432	POP1	89	51.813	ENSACLG00000010951	pop1	95	46.856	Astatotilapia_calliptera
ENSCHOG00000011432	POP1	97	44.831	ENSAMXG00000014483	POP1	94	43.483	Astyanax_mexicanus
ENSCHOG00000011432	POP1	99	74.615	ENSBTAG00000012596	POP1	95	74.615	Bos_taurus
ENSCHOG00000011432	POP1	100	78.279	ENSCJAG00000015567	POP1	96	78.484	Callithrix_jacchus
ENSCHOG00000011432	POP1	100	75.487	ENSCAFG00000000469	POP1	95	75.487	Canis_familiaris
ENSCHOG00000011432	POP1	100	77.026	ENSCAFG00020026765	POP1	95	77.026	Canis_lupus_dingo
ENSCHOG00000011432	POP1	99	74.641	ENSCHIG00000017066	POP1	95	74.641	Capra_hircus
ENSCHOG00000011432	POP1	99	78.154	ENSTSYG00000003097	POP1	95	78.154	Carlito_syrichta
ENSCHOG00000011432	POP1	96	79.070	ENSCAPG00000007251	POP1	90	79.070	Cavia_aperea
ENSCHOG00000011432	POP1	100	74.693	ENSCPOG00000002901	POP1	95	74.488	Cavia_porcellus
ENSCHOG00000011432	POP1	100	79.406	ENSCCAG00000018939	POP1	97	79.406	Cebus_capucinus
ENSCHOG00000011432	POP1	100	79.611	ENSCATG00000040916	POP1	95	79.611	Cercocebus_atys
ENSCHOG00000011432	POP1	100	76.230	ENSCLAG00000007208	POP1	92	76.230	Chinchilla_lanigera
ENSCHOG00000011432	POP1	94	79.176	ENSCSAG00000012340	POP1	99	79.393	Chlorocebus_sabaeus
ENSCHOG00000011432	POP1	99	60.861	ENSCPBG00000006373	POP1	95	60.861	Chrysemys_picta_bellii
ENSCHOG00000011432	POP1	70	38.911	ENSCING00000008323	-	90	37.102	Ciona_intestinalis
ENSCHOG00000011432	POP1	100	79.508	ENSCANG00000001647	POP1	95	79.508	Colobus_angolensis_palliatus
ENSCHOG00000011432	POP1	96	79.281	ENSCGRG00001017308	Pop1	95	72.737	Cricetulus_griseus_chok1gshd
ENSCHOG00000011432	POP1	96	73.614	ENSCGRG00000010824	Pop1	95	66.975	Cricetulus_griseus_crigri
ENSCHOG00000011432	POP1	96	45.567	ENSCSEG00000008737	POP1	93	45.670	Cynoglossus_semilaevis
ENSCHOG00000011432	POP1	96	47.107	ENSCVAG00000022248	pop1	94	47.004	Cyprinodon_variegatus
ENSCHOG00000011432	POP1	94	89.934	ENSDNOG00000019974	POP1	86	89.934	Dasypus_novemcinctus
ENSCHOG00000011432	POP1	96	74.000	ENSDORG00000015384	Pop1	95	67.456	Dipodomys_ordii
ENSCHOG00000011432	POP1	64	32.437	FBgn0026702	l(1)G0045	70	32.500	Drosophila_melanogaster
ENSCHOG00000011432	POP1	84	69.703	ENSETEG00000007839	POP1	79	69.703	Echinops_telfairi
ENSCHOG00000011432	POP1	100	79.179	ENSEASG00005003189	POP1	94	79.179	Equus_asinus_asinus
ENSCHOG00000011432	POP1	100	78.872	ENSECAG00000024236	POP1	95	78.872	Equus_caballus
ENSCHOG00000011432	POP1	71	78.378	ENSEEUG00000003050	-	70	78.378	Erinaceus_europaeus
ENSCHOG00000011432	POP1	98	46.279	ENSELUG00000003526	pop1	96	46.334	Esox_lucius
ENSCHOG00000011432	POP1	99	79.012	ENSFCAG00000002168	POP1	95	79.012	Felis_catus
ENSCHOG00000011432	POP1	95	59.442	ENSFALG00000005711	POP1	92	59.236	Ficedula_albicollis
ENSCHOG00000011432	POP1	100	76.151	ENSFDAG00000017068	POP1	95	76.151	Fukomys_damarensis
ENSCHOG00000011432	POP1	88	50.847	ENSFHEG00000019518	pop1	95	46.281	Fundulus_heteroclitus
ENSCHOG00000011432	POP1	99	43.383	ENSGMOG00000000659	POP1	99	43.284	Gadus_morhua
ENSCHOG00000011432	POP1	96	46.646	ENSGAFG00000019770	POP1	93	46.646	Gambusia_affinis
ENSCHOG00000011432	POP1	96	45.691	ENSGACG00000003499	pop1	92	45.691	Gasterosteus_aculeatus
ENSCHOG00000011432	POP1	96	62.433	ENSGAGG00000011737	POP1	90	61.955	Gopherus_agassizii
ENSCHOG00000011432	POP1	100	80.225	ENSGGOG00000003176	POP1	95	80.225	Gorilla_gorilla
ENSCHOG00000011432	POP1	98	46.957	ENSHBUG00000021583	pop1	95	46.957	Haplochromis_burtoni
ENSCHOG00000011432	POP1	100	75.615	ENSHGLG00000006029	POP1	95	75.615	Heterocephalus_glaber_female
ENSCHOG00000011432	POP1	100	75.615	ENSHGLG00100016879	POP1	95	75.615	Heterocephalus_glaber_male
ENSCHOG00000011432	POP1	96	46.154	ENSHCOG00000013888	pop1	98	46.154	Hippocampus_comes
ENSCHOG00000011432	POP1	96	44.544	ENSIPUG00000018336	pop1	87	61.176	Ictalurus_punctatus
ENSCHOG00000011432	POP1	99	78.154	ENSSTOG00000011455	POP1	92	78.154	Ictidomys_tridecemlineatus
ENSCHOG00000011432	POP1	100	72.119	ENSJJAG00000013325	Pop1	95	72.119	Jaculus_jaculus
ENSCHOG00000011432	POP1	96	46.680	ENSKMAG00000001346	POP1	94	46.369	Kryptolebias_marmoratus
ENSCHOG00000011432	POP1	93	45.622	ENSLBEG00000024457	POP1	95	45.648	Labrus_bergylta
ENSCHOG00000011432	POP1	93	59.519	ENSLACG00000012498	POP1	91	59.519	Latimeria_chalumnae
ENSCHOG00000011432	POP1	96	50.000	ENSLOCG00000009817	POP1	92	50.106	Lepisosteus_oculatus
ENSCHOG00000011432	POP1	96	87.738	ENSLAFG00000010770	POP1	88	87.738	Loxodonta_africana
ENSCHOG00000011432	POP1	100	79.713	ENSMFAG00000000347	POP1	95	79.713	Macaca_fascicularis
ENSCHOG00000011432	POP1	100	79.303	ENSMNEG00000036870	POP1	95	79.303	Macaca_nemestrina
ENSCHOG00000011432	POP1	100	79.611	ENSMLEG00000034986	POP1	95	79.611	Mandrillus_leucophaeus
ENSCHOG00000011432	POP1	96	47.053	ENSMAMG00000004040	pop1	93	46.949	Mastacembelus_armatus
ENSCHOG00000011432	POP1	98	46.856	ENSMZEG00005025448	pop1	95	46.856	Maylandia_zebra
ENSCHOG00000011432	POP1	91	68.605	ENSMGAG00000012167	POP1	88	64.407	Meleagris_gallopavo
ENSCHOG00000011432	POP1	96	79.493	ENSMAUG00000017537	Pop1	88	79.493	Mesocricetus_auratus
ENSCHOG00000011432	POP1	100	79.816	ENSMICG00000004361	POP1	96	79.816	Microcebus_murinus
ENSCHOG00000011432	POP1	96	78.224	ENSMOCG00000006356	Pop1	95	73.299	Microtus_ochrogaster
ENSCHOG00000011432	POP1	94	45.425	ENSMMOG00000018242	pop1	93	45.534	Mola_mola
ENSCHOG00000011432	POP1	100	65.990	ENSMODG00000006561	POP1	95	65.178	Monodelphis_domestica
ENSCHOG00000011432	POP1	88	52.100	ENSMALG00000012621	POP1	93	46.868	Monopterus_albus
ENSCHOG00000011432	POP1	96	80.550	MGP_CAROLIEiJ_G0019726	Pop1	88	80.550	Mus_caroli
ENSCHOG00000011432	POP1	96	81.395	ENSMUSG00000022325	Pop1	88	81.395	Mus_musculus
ENSCHOG00000011432	POP1	96	80.127	MGP_PahariEiJ_G0019735	Pop1	95	73.326	Mus_pahari
ENSCHOG00000011432	POP1	96	80.338	MGP_SPRETEiJ_G0020622	Pop1	88	80.338	Mus_spretus
ENSCHOG00000011432	POP1	100	76.380	ENSMPUG00000015250	POP1	95	76.380	Mustela_putorius_furo
ENSCHOG00000011432	POP1	100	71.996	ENSMLUG00000010204	POP1	95	72.671	Myotis_lucifugus
ENSCHOG00000011432	POP1	99	76.931	ENSNGAG00000001582	Pop1	95	76.004	Nannospalax_galili
ENSCHOG00000011432	POP1	93	46.855	ENSNBRG00000002356	pop1	94	46.731	Neolamprologus_brichardi
ENSCHOG00000011432	POP1	100	79.713	ENSNLEG00000002541	POP1	95	79.713	Nomascus_leucogenys
ENSCHOG00000011432	POP1	98	63.996	ENSMEUG00000003118	POP1	98	63.996	Notamacropus_eugenii
ENSCHOG00000011432	POP1	100	71.721	ENSOPRG00000007667	POP1	95	71.516	Ochotona_princeps
ENSCHOG00000011432	POP1	100	75.460	ENSODEG00000003984	POP1	95	75.460	Octodon_degus
ENSCHOG00000011432	POP1	98	47.614	ENSONIG00000016445	pop1	95	47.262	Oreochromis_niloticus
ENSCHOG00000011432	POP1	57	70.796	ENSOANG00000001278	-	86	70.796	Ornithorhynchus_anatinus
ENSCHOG00000011432	POP1	100	76.254	ENSOCUG00000017400	POP1	95	76.459	Oryctolagus_cuniculus
ENSCHOG00000011432	POP1	96	46.708	ENSORLG00000002839	pop1	95	46.800	Oryzias_latipes
ENSCHOG00000011432	POP1	94	46.328	ENSORLG00020022450	POP1	96	46.394	Oryzias_latipes_hni
ENSCHOG00000011432	POP1	96	46.708	ENSORLG00015012746	POP1	94	46.905	Oryzias_latipes_hsok
ENSCHOG00000011432	POP1	96	46.519	ENSOMEG00000006915	pop1	94	46.730	Oryzias_melastigma
ENSCHOG00000011432	POP1	100	78.484	ENSOGAG00000001466	POP1	95	78.484	Otolemur_garnettii
ENSCHOG00000011432	POP1	100	80.328	ENSPPAG00000018410	POP1	95	80.738	Pan_paniscus
ENSCHOG00000011432	POP1	99	78.623	ENSPPRG00000005002	POP1	95	78.623	Panthera_pardus
ENSCHOG00000011432	POP1	99	79.137	ENSPTIG00000016527	POP1	95	79.137	Panthera_tigris_altaica
ENSCHOG00000011432	POP1	100	80.020	ENSPTRG00000020458	POP1	95	80.430	Pan_troglodytes
ENSCHOG00000011432	POP1	100	79.611	ENSPANG00000009704	POP1	95	79.611	Papio_anubis
ENSCHOG00000011432	POP1	95	50.158	ENSPKIG00000016325	POP1	92	50.158	Paramormyrops_kingsleyae
ENSCHOG00000011432	POP1	91	71.824	ENSPSIG00000012343	POP1	88	67.775	Pelodiscus_sinensis
ENSCHOG00000011432	POP1	90	53.721	ENSPMGG00000022253	POP1	88	54.884	Periophthalmus_magnuspinnatus
ENSCHOG00000011432	POP1	96	81.395	ENSPEMG00000023633	Pop1	89	81.395	Peromyscus_maniculatus_bairdii
ENSCHOG00000011432	POP1	94	42.206	ENSPMAG00000003209	POP1	100	42.267	Petromyzon_marinus
ENSCHOG00000011432	POP1	99	63.174	ENSPCIG00000012216	POP1	95	63.238	Phascolarctos_cinereus
ENSCHOG00000011432	POP1	96	47.539	ENSPFOG00000012490	POP1	93	47.188	Poecilia_formosa
ENSCHOG00000011432	POP1	96	47.435	ENSPLAG00000004646	POP1	93	47.083	Poecilia_latipinna
ENSCHOG00000011432	POP1	96	47.555	ENSPMEG00000019592	POP1	93	47.451	Poecilia_mexicana
ENSCHOG00000011432	POP1	96	47.424	ENSPREG00000020951	POP1	93	47.213	Poecilia_reticulata
ENSCHOG00000011432	POP1	100	79.611	ENSPPYG00000018777	POP1	95	79.611	Pongo_abelii
ENSCHOG00000011432	POP1	99	73.668	ENSPCAG00000016662	POP1	95	73.668	Procavia_capensis
ENSCHOG00000011432	POP1	100	81.045	ENSPCOG00000019420	POP1	96	81.045	Propithecus_coquereli
ENSCHOG00000011432	POP1	99	78.726	ENSPVAG00000014468	POP1	95	78.726	Pteropus_vampyrus
ENSCHOG00000011432	POP1	93	46.703	ENSPNYG00000004476	pop1	97	46.162	Pundamilia_nyererei
ENSCHOG00000011432	POP1	99	44.112	ENSPNAG00000000265	pop1	97	41.699	Pygocentrus_nattereri
ENSCHOG00000011432	POP1	96	80.338	ENSRNOG00000005243	Pop1	88	80.338	Rattus_norvegicus
ENSCHOG00000011432	POP1	100	79.508	ENSRBIG00000007996	POP1	95	79.508	Rhinopithecus_bieti
ENSCHOG00000011432	POP1	100	79.508	ENSRROG00000012334	POP1	95	79.508	Rhinopithecus_roxellana
ENSCHOG00000011432	POP1	100	78.484	ENSSBOG00000020830	POP1	96	78.484	Saimiri_boliviensis_boliviensis
ENSCHOG00000011432	POP1	96	73.319	ENSSHAG00000000296	POP1	87	73.319	Sarcophilus_harrisii
ENSCHOG00000011432	POP1	97	47.320	ENSSFOG00015007429	pop1	93	46.830	Scleropages_formosus
ENSCHOG00000011432	POP1	89	49.770	ENSSMAG00000010467	POP1	98	45.605	Scophthalmus_maximus
ENSCHOG00000011432	POP1	98	45.976	ENSSDUG00000007817	POP1	95	46.317	Seriola_dumerili
ENSCHOG00000011432	POP1	98	46.076	ENSSLDG00000012565	POP1	95	46.115	Seriola_lalandi_dorsalis
ENSCHOG00000011432	POP1	99	55.204	ENSSPUG00000003550	-	95	55.759	Sphenodon_punctatus
ENSCHOG00000011432	POP1	94	47.634	ENSSPAG00000014955	pop1	94	47.583	Stegastes_partitus
ENSCHOG00000011432	POP1	100	75.592	ENSSSCG00000006078	POP1	95	75.592	Sus_scrofa
ENSCHOG00000011432	POP1	96	52.810	ENSTGUG00000012011	-	100	53.022	Taeniopygia_guttata
ENSCHOG00000011432	POP1	91	52.644	ENSTRUG00000010856	pop1	88	52.644	Takifugu_rubripes
ENSCHOG00000011432	POP1	92	51.876	ENSTNIG00000013297	pop1	99	46.347	Tetraodon_nigroviridis
ENSCHOG00000011432	POP1	100	74.719	ENSTBEG00000014214	POP1	100	74.719	Tupaia_belangeri
ENSCHOG00000011432	POP1	100	75.282	ENSTTRG00000016071	POP1	95	75.282	Tursiops_truncatus
ENSCHOG00000011432	POP1	96	76.414	ENSUAMG00000017309	POP1	95	76.414	Ursus_americanus
ENSCHOG00000011432	POP1	91	90.816	ENSUMAG00000016952	POP1	95	90.816	Ursus_maritimus
ENSCHOG00000011432	POP1	81	87.611	ENSVPAG00000008278	POP1	77	87.611	Vicugna_pacos
ENSCHOG00000011432	POP1	100	77.333	ENSVVUG00000010994	POP1	95	77.333	Vulpes_vulpes
ENSCHOG00000011432	POP1	82	53.027	ENSXCOG00000017043	POP1	79	53.191	Xiphophorus_couchianus
ENSCHOG00000011432	POP1	98	45.641	ENSXMAG00000002472	POP1	95	45.659	Xiphophorus_maculatus