EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000011439 (Gene tree)
Gene ID: -
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 13135 bases
Position: chrGeneScaffold_2881:964-14098
Accession: 11157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010112	zf-U1	PF06220.12	3.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000011465	SNRPC-201	540	-	ENSCHOP00000010112	179 (aa)	-	UPI0001FA02DC

Gene Model

Click here to download ENSCHOG00000011439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000011439's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000011439	SNRPC	100	77.778	ENSG00000124562	SNRPC	100	81.132	Homo_sapiens
ENSCHOG00000011439	SNRPC	100	77.348	ENSAMEG00000000963	SNRPC	88	83.125	Ailuropoda_melanoleuca
ENSCHOG00000011439	SNRPC	91	80.368	ENSACAG00000015721	SNRPC	88	81.761	Anolis_carolinensis
ENSCHOG00000011439	SNRPC	100	77.222	ENSANAG00000019696	-	100	81.132	Aotus_nancymaae
ENSCHOG00000011439	SNRPC	88	69.427	ENSANAG00000021026	-	100	61.635	Aotus_nancymaae
ENSCHOG00000011439	SNRPC	88	75.796	ENSANAG00000020588	-	92	75.796	Aotus_nancymaae
ENSCHOG00000011439	SNRPC	88	79.618	ENSANAG00000019157	-	100	78.616	Aotus_nancymaae
ENSCHOG00000011439	SNRPC	88	59.236	ENSANAG00000021444	-	100	57.233	Aotus_nancymaae
ENSCHOG00000011439	SNRPC	88	81.529	ENSANAG00000007843	-	100	80.503	Aotus_nancymaae
ENSCHOG00000011439	SNRPC	94	69.006	ENSANAG00000019726	-	92	71.069	Aotus_nancymaae
ENSCHOG00000011439	SNRPC	88	74.522	ENSAMXG00000032641	snrpc	100	71.069	Astyanax_mexicanus
ENSCHOG00000011439	SNRPC	88	82.166	ENSBTAG00000024549	SNRPC	100	81.132	Bos_taurus
ENSCHOG00000011439	SNRPC	100	77.222	ENSCJAG00000015321	-	100	81.132	Callithrix_jacchus
ENSCHOG00000011439	SNRPC	88	80.255	ENSCJAG00000041822	-	100	79.245	Callithrix_jacchus
ENSCHOG00000011439	SNRPC	88	80.892	ENSCJAG00000043055	-	100	79.874	Callithrix_jacchus
ENSCHOG00000011439	SNRPC	88	78.344	ENSCAFG00000031775	-	100	77.358	Canis_familiaris
ENSCHOG00000011439	SNRPC	88	65.605	ENSCAFG00000025525	-	100	57.225	Canis_familiaris
ENSCHOG00000011439	SNRPC	88	72.152	ENSCAFG00000028988	-	100	71.875	Canis_familiaris
ENSCHOG00000011439	SNRPC	88	78.344	ENSCAFG00020017383	-	100	77.358	Canis_lupus_dingo
ENSCHOG00000011439	SNRPC	88	72.611	ENSCAFG00020009944	-	91	71.698	Canis_lupus_dingo
ENSCHOG00000011439	SNRPC	88	79.618	ENSCAFG00020005758	-	100	78.616	Canis_lupus_dingo
ENSCHOG00000011439	SNRPC	88	82.166	ENSCAFG00020005945	-	100	81.132	Canis_lupus_dingo
ENSCHOG00000011439	SNRPC	88	63.068	ENSCAFG00020026577	-	100	68.539	Canis_lupus_dingo
ENSCHOG00000011439	SNRPC	88	81.529	ENSCHIG00000012087	-	100	80.503	Capra_hircus
ENSCHOG00000011439	SNRPC	88	63.694	ENSCHIG00000005039	-	100	54.598	Capra_hircus
ENSCHOG00000011439	SNRPC	88	72.785	ENSTSYG00000029745	-	62	72.358	Carlito_syrichta
ENSCHOG00000011439	SNRPC	88	65.605	ENSTSYG00000025721	-	100	64.780	Carlito_syrichta
ENSCHOG00000011439	SNRPC	88	82.166	ENSTSYG00000011216	-	100	81.132	Carlito_syrichta
ENSCHOG00000011439	SNRPC	79	80.986	ENSCAPG00000005161	SNRPC	100	80.986	Cavia_aperea
ENSCHOG00000011439	SNRPC	88	82.166	ENSCPOG00000008563	SNRPC	100	81.132	Cavia_porcellus
ENSCHOG00000011439	SNRPC	87	68.387	ENSCCAG00000026624	-	66	67.516	Cebus_capucinus
ENSCHOG00000011439	SNRPC	89	61.635	ENSCCAG00000022209	-	97	61.635	Cebus_capucinus
ENSCHOG00000011439	SNRPC	89	74.843	ENSCCAG00000022751	-	97	74.843	Cebus_capucinus
ENSCHOG00000011439	SNRPC	94	73.810	ENSCCAG00000036059	-	89	76.101	Cebus_capucinus
ENSCHOG00000011439	SNRPC	94	81.548	ENSCATG00000035787	SNRPC	100	81.132	Cercocebus_atys
ENSCHOG00000011439	SNRPC	88	82.166	ENSCLAG00000016920	SNRPC	100	81.132	Chinchilla_lanigera
ENSCHOG00000011439	SNRPC	87	69.231	ENSCLAG00000010242	-	96	69.231	Chinchilla_lanigera
ENSCHOG00000011439	SNRPC	88	63.068	ENSCSAG00000009821	SNRPC	100	68.539	Chlorocebus_sabaeus
ENSCHOG00000011439	SNRPC	88	80.892	ENSCPBG00000027142	SNRPC	100	79.874	Chrysemys_picta_bellii
ENSCHOG00000011439	SNRPC	88	82.166	ENSCANG00000028035	SNRPC	100	81.132	Colobus_angolensis_palliatus
ENSCHOG00000011439	SNRPC	89	73.585	ENSCGRG00001021483	-	100	73.585	Cricetulus_griseus_chok1gshd
ENSCHOG00000011439	SNRPC	88	82.166	ENSCGRG00001009011	-	100	81.132	Cricetulus_griseus_chok1gshd
ENSCHOG00000011439	SNRPC	89	82.390	ENSCGRG00000005005	Snrpc	100	82.390	Cricetulus_griseus_crigri
ENSCHOG00000011439	SNRPC	88	73.885	ENSDARG00000009871	snrpc	100	72.956	Danio_rerio
ENSCHOG00000011439	SNRPC	88	81.529	ENSDNOG00000034699	-	99	80.503	Dasypus_novemcinctus
ENSCHOG00000011439	SNRPC	86	74.675	ENSETEG00000011265	-	100	73.718	Echinops_telfairi
ENSCHOG00000011439	SNRPC	86	79.221	ENSETEG00000008268	-	100	78.205	Echinops_telfairi
ENSCHOG00000011439	SNRPC	88	82.166	ENSEASG00005021007	SNRPC	100	81.132	Equus_asinus_asinus
ENSCHOG00000011439	SNRPC	88	82.166	ENSECAG00000026848	SNRPC	100	81.132	Equus_caballus
ENSCHOG00000011439	SNRPC	100	89.385	ENSEEUG00000014633	SNRPC	90	97.452	Erinaceus_europaeus
ENSCHOG00000011439	SNRPC	90	66.460	ENSELUG00000000815	SNRPC	61	66.316	Esox_lucius
ENSCHOG00000011439	SNRPC	88	62.733	ENSELUG00000020489	snrpc	60	67.368	Esox_lucius
ENSCHOG00000011439	SNRPC	94	80.357	ENSFCAG00000044077	-	100	81.132	Felis_catus
ENSCHOG00000011439	SNRPC	88	75.159	ENSFCAG00000031775	-	88	73.585	Felis_catus
ENSCHOG00000011439	SNRPC	88	81.529	ENSFALG00000003756	SNRPC	100	80.503	Ficedula_albicollis
ENSCHOG00000011439	SNRPC	88	82.166	ENSFDAG00000018111	SNRPC	100	81.132	Fukomys_damarensis
ENSCHOG00000011439	SNRPC	88	80.380	ENSGALG00000002773	SNRPC	100	79.375	Gallus_gallus
ENSCHOG00000011439	SNRPC	88	80.892	ENSGAGG00000003063	SNRPC	100	79.874	Gopherus_agassizii
ENSCHOG00000011439	SNRPC	88	82.166	ENSGGOG00000012499	SNRPC	100	81.132	Gorilla_gorilla
ENSCHOG00000011439	SNRPC	71	55.906	ENSHGLG00000005871	-	100	59.119	Heterocephalus_glaber_female
ENSCHOG00000011439	SNRPC	88	73.248	ENSHGLG00000017741	-	100	73.585	Heterocephalus_glaber_female
ENSCHOG00000011439	SNRPC	88	82.166	ENSHGLG00000013981	SNRPC	99	82.692	Heterocephalus_glaber_female
ENSCHOG00000011439	SNRPC	88	78.344	ENSHGLG00100017764	-	100	77.358	Heterocephalus_glaber_male
ENSCHOG00000011439	SNRPC	88	73.248	ENSHGLG00100010786	-	100	73.585	Heterocephalus_glaber_male
ENSCHOG00000011439	SNRPC	88	82.166	ENSHGLG00100009478	SNRPC	99	82.692	Heterocephalus_glaber_male
ENSCHOG00000011439	SNRPC	88	75.159	ENSIPUG00000024851	snrpc	100	74.214	Ictalurus_punctatus
ENSCHOG00000011439	SNRPC	88	82.166	ENSSTOG00000013786	SNRPC	100	81.132	Ictidomys_tridecemlineatus
ENSCHOG00000011439	SNRPC	88	82.166	ENSJJAG00000021741	Snrpc	100	81.132	Jaculus_jaculus
ENSCHOG00000011439	SNRPC	93	76.786	ENSLACG00000013753	SNRPC	89	78.125	Latimeria_chalumnae
ENSCHOG00000011439	SNRPC	88	82.166	ENSLAFG00000013534	SNRPC	100	81.132	Loxodonta_africana
ENSCHOG00000011439	SNRPC	88	81.529	ENSMFAG00000030525	-	100	80.503	Macaca_fascicularis
ENSCHOG00000011439	SNRPC	88	82.166	ENSMFAG00000031764	-	100	81.132	Macaca_fascicularis
ENSCHOG00000011439	SNRPC	87	82.692	ENSMMUG00000000869	-	97	81.132	Macaca_mulatta
ENSCHOG00000011439	SNRPC	88	80.892	ENSMMUG00000039415	-	100	79.874	Macaca_mulatta
ENSCHOG00000011439	SNRPC	88	73.248	ENSMMUG00000045425	-	100	72.327	Macaca_mulatta
ENSCHOG00000011439	SNRPC	94	81.548	ENSMNEG00000032731	SNRPC	100	81.132	Macaca_nemestrina
ENSCHOG00000011439	SNRPC	87	76.774	ENSMLEG00000040224	-	89	76.774	Mandrillus_leucophaeus
ENSCHOG00000011439	SNRPC	100	76.536	ENSMLEG00000033916	-	100	81.132	Mandrillus_leucophaeus
ENSCHOG00000011439	SNRPC	86	59.740	ENSMLEG00000039724	-	81	57.143	Mandrillus_leucophaeus
ENSCHOG00000011439	SNRPC	88	78.344	ENSMGAG00000006054	SNRPC	100	80.503	Meleagris_gallopavo
ENSCHOG00000011439	SNRPC	92	78.049	ENSMICG00000007339	-	100	81.132	Microcebus_murinus
ENSCHOG00000011439	SNRPC	94	46.746	ENSMICG00000036552	-	88	66.038	Microcebus_murinus
ENSCHOG00000011439	SNRPC	88	71.975	ENSMICG00000009130	-	100	69.811	Microcebus_murinus
ENSCHOG00000011439	SNRPC	88	81.529	ENSMICG00000032183	-	100	80.503	Microcebus_murinus
ENSCHOG00000011439	SNRPC	88	82.166	ENSMOCG00000017609	Snrpc	100	81.132	Microtus_ochrogaster
ENSCHOG00000011439	SNRPC	88	82.166	ENSMODG00000013904	-	100	81.132	Monodelphis_domestica
ENSCHOG00000011439	SNRPC	88	56.051	ENSMALG00000001197	snrpc	100	60.377	Monopterus_albus
ENSCHOG00000011439	SNRPC	88	82.166	MGP_CAROLIEiJ_G0021308	Snrpc	100	81.132	Mus_caroli
ENSCHOG00000011439	SNRPC	88	82.166	ENSMUSG00000024217	Snrpc	100	81.132	Mus_musculus
ENSCHOG00000011439	SNRPC	89	83.019	ENSMPUG00000003210	SNRPC	100	83.019	Mustela_putorius_furo
ENSCHOG00000011439	SNRPC	89	83.019	ENSMLUG00000002488	SNRPC	100	83.019	Myotis_lucifugus
ENSCHOG00000011439	SNRPC	88	82.166	ENSNGAG00000019686	Snrpc	100	81.132	Nannospalax_galili
ENSCHOG00000011439	SNRPC	88	82.166	ENSNLEG00000034810	SNRPC	100	81.132	Nomascus_leucogenys
ENSCHOG00000011439	SNRPC	79	80.986	ENSMEUG00000009300	SNRPC	100	80.986	Notamacropus_eugenii
ENSCHOG00000011439	SNRPC	88	82.166	ENSODEG00000020370	-	100	81.132	Octodon_degus
ENSCHOG00000011439	SNRPC	88	82.166	ENSODEG00000018985	-	100	81.132	Octodon_degus
ENSCHOG00000011439	SNRPC	88	80.892	ENSODEG00000019633	-	100	79.874	Octodon_degus
ENSCHOG00000011439	SNRPC	88	82.166	ENSODEG00000020201	-	100	81.132	Octodon_degus
ENSCHOG00000011439	SNRPC	68	71.074	ENSODEG00000006008	-	88	69.919	Octodon_degus
ENSCHOG00000011439	SNRPC	88	82.166	ENSODEG00000017080	-	100	81.132	Octodon_degus
ENSCHOG00000011439	SNRPC	80	78.231	ENSOANG00000003405	SNRPC	100	77.703	Ornithorhynchus_anatinus
ENSCHOG00000011439	SNRPC	88	82.166	ENSOCUG00000026668	-	100	81.132	Oryctolagus_cuniculus
ENSCHOG00000011439	SNRPC	88	80.255	ENSOCUG00000023292	-	100	79.245	Oryctolagus_cuniculus
ENSCHOG00000011439	SNRPC	90	80.124	ENSOCUG00000026430	-	99	80.503	Oryctolagus_cuniculus
ENSCHOG00000011439	SNRPC	58	68.932	ENSORLG00020012607	SNRPC	65	68.571	Oryzias_latipes_hni
ENSCHOG00000011439	SNRPC	58	69.903	ENSOMEG00000012014	snrpc	86	70.440	Oryzias_melastigma
ENSCHOG00000011439	SNRPC	87	82.581	ENSOGAG00000008755	-	88	82.803	Otolemur_garnettii
ENSCHOG00000011439	SNRPC	85	41.667	ENSOGAG00000028405	-	99	66.013	Otolemur_garnettii
ENSCHOG00000011439	SNRPC	88	80.255	ENSOGAG00000026269	-	100	79.245	Otolemur_garnettii
ENSCHOG00000011439	SNRPC	88	82.166	ENSOARG00000010823	SNRPC	100	81.132	Ovis_aries
ENSCHOG00000011439	SNRPC	88	82.166	ENSPPAG00000043871	SNRPC	100	81.132	Pan_paniscus
ENSCHOG00000011439	SNRPC	94	80.357	ENSPPRG00000008647	-	100	81.132	Panthera_pardus
ENSCHOG00000011439	SNRPC	85	46.795	ENSPTIG00000013329	-	62	55.789	Panthera_tigris_altaica
ENSCHOG00000011439	SNRPC	94	80.357	ENSPTIG00000021867	-	100	81.132	Panthera_tigris_altaica
ENSCHOG00000011439	SNRPC	88	82.166	ENSPTRG00000018070	SNRPC	100	81.132	Pan_troglodytes
ENSCHOG00000011439	SNRPC	91	69.939	ENSPANG00000018228	-	94	71.069	Papio_anubis
ENSCHOG00000011439	SNRPC	94	81.548	ENSPANG00000022802	-	100	81.132	Papio_anubis
ENSCHOG00000011439	SNRPC	88	70.701	ENSPKIG00000001671	SNRPC	99	71.154	Paramormyrops_kingsleyae
ENSCHOG00000011439	SNRPC	51	68.478	ENSPKIG00000003136	snrpc	61	67.368	Paramormyrops_kingsleyae
ENSCHOG00000011439	SNRPC	88	81.529	ENSPSIG00000004876	SNRPC	77	81.013	Pelodiscus_sinensis
ENSCHOG00000011439	SNRPC	88	63.694	ENSPMGG00000022162	snrpc	99	64.331	Periophthalmus_magnuspinnatus
ENSCHOG00000011439	SNRPC	88	72.611	ENSPEMG00000002763	-	100	71.698	Peromyscus_maniculatus_bairdii
ENSCHOG00000011439	SNRPC	88	82.166	ENSPEMG00000010773	Snrpc	100	81.132	Peromyscus_maniculatus_bairdii
ENSCHOG00000011439	SNRPC	100	76.536	ENSPCAG00000016885	SNRPC	91	82.390	Procavia_capensis
ENSCHOG00000011439	SNRPC	100	75.419	ENSPCOG00000004904	SNRPC	100	81.132	Propithecus_coquereli
ENSCHOG00000011439	SNRPC	93	80.120	ENSPVAG00000015597	SNRPC	88	81.761	Pteropus_vampyrus
ENSCHOG00000011439	SNRPC	75	64.179	ENSPNYG00000004900	snrpc	60	64.211	Pundamilia_nyererei
ENSCHOG00000011439	SNRPC	88	68.790	ENSPNAG00000012799	snrpc	100	67.925	Pygocentrus_nattereri
ENSCHOG00000011439	SNRPC	88	82.166	ENSRNOG00000000493	Snrpc	100	81.132	Rattus_norvegicus
ENSCHOG00000011439	SNRPC	88	81.529	ENSRBIG00000022998	-	100	80.503	Rhinopithecus_bieti
ENSCHOG00000011439	SNRPC	96	69.364	ENSRBIG00000036353	-	83	72.956	Rhinopithecus_bieti
ENSCHOG00000011439	SNRPC	88	81.529	ENSRBIG00000014819	-	100	80.503	Rhinopithecus_bieti
ENSCHOG00000011439	SNRPC	100	78.333	ENSRBIG00000037567	-	100	81.132	Rhinopithecus_bieti
ENSCHOG00000011439	SNRPC	100	77.778	ENSRROG00000041300	SNRPC	100	81.132	Rhinopithecus_roxellana
ENSCHOG00000011439	SNRPC	86	68.831	ENSSBOG00000023189	-	91	67.949	Saimiri_boliviensis_boliviensis
ENSCHOG00000011439	SNRPC	100	77.222	ENSSBOG00000031528	-	100	81.132	Saimiri_boliviensis_boliviensis
ENSCHOG00000011439	SNRPC	83	66.892	ENSSBOG00000032361	-	75	62.295	Saimiri_boliviensis_boliviensis
ENSCHOG00000011439	SNRPC	92	66.061	ENSSBOG00000032882	-	93	65.385	Saimiri_boliviensis_boliviensis
ENSCHOG00000011439	SNRPC	96	77.778	ENSSHAG00000000945	-	87	82.803	Sarcophilus_harrisii
ENSCHOG00000011439	SNRPC	63	59.292	ENSSFOG00015022422	snrpc	79	73.171	Scleropages_formosus
ENSCHOG00000011439	SNRPC	88	71.975	ENSSFOG00015019150	snrpc	100	71.069	Scleropages_formosus
ENSCHOG00000011439	SNRPC	88	81.529	ENSSPUG00000002502	SNRPC	100	80.503	Sphenodon_punctatus
ENSCHOG00000011439	SNRPC	88	82.166	ENSSSCG00000001531	SNRPC	100	81.132	Sus_scrofa
ENSCHOG00000011439	SNRPC	88	82.166	ENSTGUG00000001773	SNRPC	100	81.132	Taeniopygia_guttata
ENSCHOG00000011439	SNRPC	88	66.250	ENSTNIG00000018307	snrpc	100	64.596	Tetraodon_nigroviridis
ENSCHOG00000011439	SNRPC	79	91.549	ENSTBEG00000016759	-	79	91.549	Tupaia_belangeri
ENSCHOG00000011439	SNRPC	86	57.143	ENSTBEG00000015356	-	68	63.542	Tupaia_belangeri
ENSCHOG00000011439	SNRPC	86	75.325	ENSTBEG00000013022	-	100	74.359	Tupaia_belangeri
ENSCHOG00000011439	SNRPC	100	75.824	ENSTTRG00000007827	SNRPC	87	83.019	Tursiops_truncatus
ENSCHOG00000011439	SNRPC	88	80.892	ENSVVUG00000021947	-	100	79.874	Vulpes_vulpes
ENSCHOG00000011439	SNRPC	96	70.391	ENSVVUG00000010467	-	87	77.564	Vulpes_vulpes
ENSCHOG00000011439	SNRPC	88	75.796	ENSXETG00000024721	snrpc	100	74.843	Xenopus_tropicalis