EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000011547 (Gene tree)
Gene ID: -
Gene Symbol: TNPO3
Alias: IPO12|LGMD1F|MTR10A|TRN-SR|TRN-SR2
Full Name: transportin 3
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 88206 bases
Position: chrGeneScaffold_3043:10503-98708
Accession: 17103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010228	Xpo1	PF08389.12	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000011602	TNPO3-201	2877	-	ENSCHOP00000010228	959 (aa)	-	UPI0001FA043C

Gene Model

Click here to download ENSCHOG00000011547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000011547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000011547	TNPO3	99	73.214	ENSG00000064419	TNPO3	99	73.214	Homo_sapiens
ENSCHOG00000011547	TNPO3	99	61.725	ENSAPOG00000018347	tnpo3	99	61.725	Acanthochromis_polyacanthus
ENSCHOG00000011547	TNPO3	100	73.285	ENSAMEG00000005135	TNPO3	99	73.285	Ailuropoda_melanoleuca
ENSCHOG00000011547	TNPO3	89	62.368	ENSACIG00000005897	tnpo3	92	62.368	Amphilophus_citrinellus
ENSCHOG00000011547	TNPO3	99	61.725	ENSAOCG00000008264	tnpo3	99	61.725	Amphiprion_ocellaris
ENSCHOG00000011547	TNPO3	89	64.596	ENSAPEG00000024300	tnpo3	93	64.596	Amphiprion_percula
ENSCHOG00000011547	TNPO3	99	61.304	ENSATEG00000003197	tnpo3	99	61.304	Anabas_testudineus
ENSCHOG00000011547	TNPO3	65	94.340	ENSAPLG00000005946	TNPO3	82	94.340	Anas_platyrhynchos
ENSCHOG00000011547	TNPO3	83	67.128	ENSACAG00000013470	TNPO3	95	67.128	Anolis_carolinensis
ENSCHOG00000011547	TNPO3	99	70.768	ENSANAG00000037940	TNPO3	99	70.768	Aotus_nancymaae
ENSCHOG00000011547	TNPO3	99	61.199	ENSACLG00000005561	tnpo3	99	61.199	Astatotilapia_calliptera
ENSCHOG00000011547	TNPO3	99	61.409	ENSAMXG00000016236	tnpo3	99	61.409	Astyanax_mexicanus
ENSCHOG00000011547	TNPO3	99	70.557	ENSBTAG00000004992	TNPO3	96	73.857	Bos_taurus
ENSCHOG00000011547	TNPO3	99	70.873	ENSCJAG00000018085	TNPO3	99	70.873	Callithrix_jacchus
ENSCHOG00000011547	TNPO3	99	71.083	ENSCAFG00000001543	TNPO3	99	71.083	Canis_familiaris
ENSCHOG00000011547	TNPO3	93	96.154	ENSCAFG00020022462	TNPO3	92	96.154	Canis_lupus_dingo
ENSCHOG00000011547	TNPO3	99	70.452	ENSCHIG00000011721	TNPO3	99	70.452	Capra_hircus
ENSCHOG00000011547	TNPO3	99	71.924	ENSTSYG00000002989	TNPO3	99	71.924	Carlito_syrichta
ENSCHOG00000011547	TNPO3	99	70.662	ENSCPOG00000039784	TNPO3	99	70.662	Cavia_porcellus
ENSCHOG00000011547	TNPO3	99	70.873	ENSCCAG00000033826	TNPO3	96	74.209	Cebus_capucinus
ENSCHOG00000011547	TNPO3	99	70.978	ENSCATG00000030018	TNPO3	96	74.326	Cercocebus_atys
ENSCHOG00000011547	TNPO3	99	70.157	ENSCLAG00000016298	TNPO3	99	70.157	Chinchilla_lanigera
ENSCHOG00000011547	TNPO3	99	70.873	ENSCSAG00000009966	TNPO3	99	70.873	Chlorocebus_sabaeus
ENSCHOG00000011547	TNPO3	89	70.926	ENSCPBG00000017497	TNPO3	96	70.926	Chrysemys_picta_bellii
ENSCHOG00000011547	TNPO3	98	34.989	ENSCING00000005042	-	98	34.989	Ciona_intestinalis
ENSCHOG00000011547	TNPO3	86	35.628	ENSCSAVG00000008623	-	56	66.667	Ciona_savignyi
ENSCHOG00000011547	TNPO3	99	70.978	ENSCANG00000033070	TNPO3	96	74.326	Colobus_angolensis_palliatus
ENSCHOG00000011547	TNPO3	99	70.662	ENSCGRG00001015925	Tnpo3	99	70.662	Cricetulus_griseus_chok1gshd
ENSCHOG00000011547	TNPO3	99	70.662	ENSCGRG00000010379	Tnpo3	99	70.662	Cricetulus_griseus_crigri
ENSCHOG00000011547	TNPO3	99	60.673	ENSCSEG00000005952	tnpo3	99	60.673	Cynoglossus_semilaevis
ENSCHOG00000011547	TNPO3	99	60.568	ENSCVAG00000020285	tnpo3	99	60.568	Cyprinodon_variegatus
ENSCHOG00000011547	TNPO3	99	60.673	ENSDARG00000045680	tnpo3	99	60.673	Danio_rerio
ENSCHOG00000011547	TNPO3	99	71.083	ENSDNOG00000002556	TNPO3	99	71.083	Dasypus_novemcinctus
ENSCHOG00000011547	TNPO3	63	66.340	ENSDORG00000002433	Tnpo3	95	66.340	Dipodomys_ordii
ENSCHOG00000011547	TNPO3	82	37.405	FBgn0031456	Tnpo-SR	82	37.405	Drosophila_melanogaster
ENSCHOG00000011547	TNPO3	92	67.757	ENSETEG00000002101	TNPO3	91	67.757	Echinops_telfairi
ENSCHOG00000011547	TNPO3	99	50.473	ENSEBUG00000016931	tnpo3	99	50.473	Eptatretus_burgeri
ENSCHOG00000011547	TNPO3	99	70.873	ENSEASG00005008677	TNPO3	99	70.873	Equus_asinus_asinus
ENSCHOG00000011547	TNPO3	99	70.873	ENSECAG00000012815	TNPO3	96	74.209	Equus_caballus
ENSCHOG00000011547	TNPO3	100	69.927	ENSEEUG00000005178	TNPO3	99	69.927	Erinaceus_europaeus
ENSCHOG00000011547	TNPO3	99	62.302	ENSELUG00000012153	tnpo3	99	62.302	Esox_lucius
ENSCHOG00000011547	TNPO3	99	71.083	ENSFCAG00000018186	TNPO3	96	74.443	Felis_catus
ENSCHOG00000011547	TNPO3	89	66.321	ENSFALG00000010667	TNPO3	93	66.321	Ficedula_albicollis
ENSCHOG00000011547	TNPO3	99	70.619	ENSFDAG00000019578	TNPO3	99	70.619	Fukomys_damarensis
ENSCHOG00000011547	TNPO3	99	60.778	ENSFHEG00000012859	tnpo3	99	60.778	Fundulus_heteroclitus
ENSCHOG00000011547	TNPO3	99	60.883	ENSGMOG00000007324	tnpo3	99	60.883	Gadus_morhua
ENSCHOG00000011547	TNPO3	62	64.034	ENSGALG00000039420	TNPO3	98	64.034	Gallus_gallus
ENSCHOG00000011547	TNPO3	99	61.409	ENSGACG00000000699	tnpo3	99	61.409	Gasterosteus_aculeatus
ENSCHOG00000011547	TNPO3	89	70.809	ENSGAGG00000006777	TNPO3	96	70.809	Gopherus_agassizii
ENSCHOG00000011547	TNPO3	99	70.978	ENSGGOG00000008339	TNPO3	96	74.326	Gorilla_gorilla
ENSCHOG00000011547	TNPO3	99	61.199	ENSHBUG00000008351	tnpo3	99	61.199	Haplochromis_burtoni
ENSCHOG00000011547	TNPO3	99	70.978	ENSHGLG00000004463	TNPO3	99	70.978	Heterocephalus_glaber_female
ENSCHOG00000011547	TNPO3	99	70.978	ENSHGLG00100005509	TNPO3	99	70.978	Heterocephalus_glaber_male
ENSCHOG00000011547	TNPO3	99	60.673	ENSHCOG00000007221	tnpo3	99	60.673	Hippocampus_comes
ENSCHOG00000011547	TNPO3	99	60.988	ENSIPUG00000014979	TNPO3	99	60.988	Ictalurus_punctatus
ENSCHOG00000011547	TNPO3	99	70.978	ENSSTOG00000004885	TNPO3	96	74.326	Ictidomys_tridecemlineatus
ENSCHOG00000011547	TNPO3	93	97.500	ENSJJAG00000013530	Tnpo3	95	97.500	Jaculus_jaculus
ENSCHOG00000011547	TNPO3	99	61.094	ENSKMAG00000010497	tnpo3	99	61.094	Kryptolebias_marmoratus
ENSCHOG00000011547	TNPO3	89	59.789	ENSLBEG00000011988	-	92	59.789	Labrus_bergylta
ENSCHOG00000011547	TNPO3	89	64.713	ENSLBEG00000016595	tnpo3	95	64.713	Labrus_bergylta
ENSCHOG00000011547	TNPO3	87	65.566	ENSLACG00000002351	TNPO3	99	65.566	Latimeria_chalumnae
ENSCHOG00000011547	TNPO3	99	62.566	ENSLOCG00000015556	tnpo3	99	62.566	Lepisosteus_oculatus
ENSCHOG00000011547	TNPO3	93	94.231	ENSLAFG00000002738	TNPO3	93	94.231	Loxodonta_africana
ENSCHOG00000011547	TNPO3	99	70.978	ENSMFAG00000032385	TNPO3	96	74.326	Macaca_fascicularis
ENSCHOG00000011547	TNPO3	99	70.978	ENSMMUG00000004311	TNPO3	96	74.326	Macaca_mulatta
ENSCHOG00000011547	TNPO3	99	70.978	ENSMNEG00000045277	TNPO3	96	74.326	Macaca_nemestrina
ENSCHOG00000011547	TNPO3	99	70.978	ENSMLEG00000037881	TNPO3	96	74.326	Mandrillus_leucophaeus
ENSCHOG00000011547	TNPO3	99	61.409	ENSMAMG00000021096	tnpo3	99	61.409	Mastacembelus_armatus
ENSCHOG00000011547	TNPO3	99	61.199	ENSMZEG00005015084	tnpo3	99	61.199	Maylandia_zebra
ENSCHOG00000011547	TNPO3	72	67.672	ENSMGAG00000002839	TNPO3	91	67.672	Meleagris_gallopavo
ENSCHOG00000011547	TNPO3	99	70.557	ENSMAUG00000013463	Tnpo3	99	70.557	Mesocricetus_auratus
ENSCHOG00000011547	TNPO3	99	71.083	ENSMICG00000000140	TNPO3	99	71.083	Microcebus_murinus
ENSCHOG00000011547	TNPO3	99	70.662	ENSMOCG00000013264	Tnpo3	99	70.662	Microtus_ochrogaster
ENSCHOG00000011547	TNPO3	99	60.778	ENSMMOG00000005887	tnpo3	99	60.778	Mola_mola
ENSCHOG00000011547	TNPO3	99	69.926	ENSMODG00000014700	TNPO3	99	69.926	Monodelphis_domestica
ENSCHOG00000011547	TNPO3	99	61.199	ENSMALG00000006675	tnpo3	99	61.199	Monopterus_albus
ENSCHOG00000011547	TNPO3	93	96.154	MGP_CAROLIEiJ_G0028176	Tnpo3	93	96.154	Mus_caroli
ENSCHOG00000011547	TNPO3	93	96.154	ENSMUSG00000012535	Tnpo3	93	96.154	Mus_musculus
ENSCHOG00000011547	TNPO3	93	96.154	MGP_PahariEiJ_G0021934	Tnpo3	93	96.154	Mus_pahari
ENSCHOG00000011547	TNPO3	93	96.154	MGP_SPRETEiJ_G0029176	Tnpo3	93	96.154	Mus_spretus
ENSCHOG00000011547	TNPO3	99	71.083	ENSMPUG00000006021	TNPO3	99	71.083	Mustela_putorius_furo
ENSCHOG00000011547	TNPO3	88	80.040	ENSMLUG00000000947	TNPO3	96	80.040	Myotis_lucifugus
ENSCHOG00000011547	TNPO3	99	70.978	ENSNGAG00000008722	Tnpo3	99	70.978	Nannospalax_galili
ENSCHOG00000011547	TNPO3	99	59.621	ENSNBRG00000019001	tnpo3	100	60.217	Neolamprologus_brichardi
ENSCHOG00000011547	TNPO3	99	73.004	ENSNLEG00000012491	TNPO3	99	73.004	Nomascus_leucogenys
ENSCHOG00000011547	TNPO3	75	96.269	ENSMEUG00000002445	TNPO3	74	96.269	Notamacropus_eugenii
ENSCHOG00000011547	TNPO3	89	83.010	ENSOPRG00000006163	TNPO3	88	83.010	Ochotona_princeps
ENSCHOG00000011547	TNPO3	97	70.267	ENSODEG00000012826	TNPO3	100	70.267	Octodon_degus
ENSCHOG00000011547	TNPO3	99	61.514	ENSONIG00000007604	tnpo3	99	61.514	Oreochromis_niloticus
ENSCHOG00000011547	TNPO3	89	73.001	ENSOANG00000011451	TNPO3	93	73.117	Ornithorhynchus_anatinus
ENSCHOG00000011547	TNPO3	100	71.904	ENSOCUG00000010105	TNPO3	99	71.904	Oryctolagus_cuniculus
ENSCHOG00000011547	TNPO3	99	60.568	ENSORLG00000029369	tnpo3	99	60.568	Oryzias_latipes
ENSCHOG00000011547	TNPO3	99	60.568	ENSORLG00020003464	tnpo3	99	60.568	Oryzias_latipes_hni
ENSCHOG00000011547	TNPO3	99	60.673	ENSORLG00015002610	tnpo3	99	60.673	Oryzias_latipes_hsok
ENSCHOG00000011547	TNPO3	99	60.673	ENSOMEG00000021006	tnpo3	99	60.673	Oryzias_melastigma
ENSCHOG00000011547	TNPO3	99	70.873	ENSOGAG00000015340	TNPO3	99	70.873	Otolemur_garnettii
ENSCHOG00000011547	TNPO3	99	71.904	ENSOARG00000004026	TNPO3	99	71.904	Ovis_aries
ENSCHOG00000011547	TNPO3	99	70.978	ENSPPAG00000034975	TNPO3	96	74.326	Pan_paniscus
ENSCHOG00000011547	TNPO3	99	71.083	ENSPPRG00000002050	TNPO3	99	71.083	Panthera_pardus
ENSCHOG00000011547	TNPO3	99	71.083	ENSPTIG00000016167	TNPO3	99	71.083	Panthera_tigris_altaica
ENSCHOG00000011547	TNPO3	99	70.978	ENSPTRG00000019676	TNPO3	96	74.326	Pan_troglodytes
ENSCHOG00000011547	TNPO3	99	73.214	ENSPANG00000022226	TNPO3	99	73.214	Papio_anubis
ENSCHOG00000011547	TNPO3	99	57.862	ENSPKIG00000008628	-	99	57.862	Paramormyrops_kingsleyae
ENSCHOG00000011547	TNPO3	99	59.937	ENSPKIG00000023234	tnpo3	99	59.937	Paramormyrops_kingsleyae
ENSCHOG00000011547	TNPO3	62	57.238	ENSPMGG00000009763	tnpo3	99	57.238	Periophthalmus_magnuspinnatus
ENSCHOG00000011547	TNPO3	99	70.662	ENSPEMG00000000422	Tnpo3	99	70.662	Peromyscus_maniculatus_bairdii
ENSCHOG00000011547	TNPO3	89	54.854	ENSPMAG00000008621	tnpo3	93	54.854	Petromyzon_marinus
ENSCHOG00000011547	TNPO3	99	69.401	ENSPCIG00000011366	TNPO3	99	69.401	Phascolarctos_cinereus
ENSCHOG00000011547	TNPO3	99	60.988	ENSPFOG00000013592	tnpo3	99	60.988	Poecilia_formosa
ENSCHOG00000011547	TNPO3	99	60.988	ENSPLAG00000010188	tnpo3	99	60.988	Poecilia_latipinna
ENSCHOG00000011547	TNPO3	99	60.988	ENSPMEG00000022731	tnpo3	99	60.988	Poecilia_mexicana
ENSCHOG00000011547	TNPO3	99	70.978	ENSPPYG00000017990	TNPO3	99	70.978	Pongo_abelii
ENSCHOG00000011547	TNPO3	92	100.000	ENSPCAG00000010158	TNPO3	91	100.000	Procavia_capensis
ENSCHOG00000011547	TNPO3	76	74.194	ENSPCOG00000023901	TNPO3	90	74.194	Propithecus_coquereli
ENSCHOG00000011547	TNPO3	100	69.854	ENSPVAG00000015757	TNPO3	99	69.854	Pteropus_vampyrus
ENSCHOG00000011547	TNPO3	99	61.199	ENSPNYG00000002349	tnpo3	99	61.199	Pundamilia_nyererei
ENSCHOG00000011547	TNPO3	99	62.250	ENSPNAG00000001142	tnpo3	99	62.250	Pygocentrus_nattereri
ENSCHOG00000011547	TNPO3	99	70.662	ENSRNOG00000021758	Tnpo3	96	73.974	Rattus_norvegicus
ENSCHOG00000011547	TNPO3	99	70.873	ENSRBIG00000042549	TNPO3	96	74.209	Rhinopithecus_bieti
ENSCHOG00000011547	TNPO3	99	70.873	ENSRROG00000039264	TNPO3	99	70.873	Rhinopithecus_roxellana
ENSCHOG00000011547	TNPO3	82	96.154	ENSSBOG00000029642	TNPO3	92	96.154	Saimiri_boliviensis_boliviensis
ENSCHOG00000011547	TNPO3	89	73.388	ENSSHAG00000006837	TNPO3	93	73.388	Sarcophilus_harrisii
ENSCHOG00000011547	TNPO3	99	57.884	ENSSFOG00015004256	tnpo3	99	57.884	Scleropages_formosus
ENSCHOG00000011547	TNPO3	99	60.988	ENSSFOG00015001474	tnpo3	99	60.988	Scleropages_formosus
ENSCHOG00000011547	TNPO3	99	61.514	ENSSMAG00000010422	tnpo3	97	61.514	Scophthalmus_maximus
ENSCHOG00000011547	TNPO3	99	61.830	ENSSDUG00000004850	tnpo3	99	61.830	Seriola_dumerili
ENSCHOG00000011547	TNPO3	99	61.830	ENSSLDG00000016927	tnpo3	99	61.830	Seriola_lalandi_dorsalis
ENSCHOG00000011547	TNPO3	69	87.589	ENSSARG00000013893	TNPO3	71	87.589	Sorex_araneus
ENSCHOG00000011547	TNPO3	93	90.385	ENSSPUG00000007457	TNPO3	92	90.385	Sphenodon_punctatus
ENSCHOG00000011547	TNPO3	79	62.451	ENSSPAG00000014209	tnpo3	99	62.451	Stegastes_partitus
ENSCHOG00000011547	TNPO3	99	70.978	ENSSSCG00000016572	TNPO3	96	74.443	Sus_scrofa
ENSCHOG00000011547	TNPO3	99	59.958	ENSTNIG00000003347	tnpo3	99	59.958	Tetraodon_nigroviridis
ENSCHOG00000011547	TNPO3	81	76.923	ENSTBEG00000007220	TNPO3	84	76.923	Tupaia_belangeri
ENSCHOG00000011547	TNPO3	100	73.493	ENSTTRG00000014618	TNPO3	99	73.493	Tursiops_truncatus
ENSCHOG00000011547	TNPO3	99	71.083	ENSUAMG00000021281	TNPO3	99	71.083	Ursus_americanus
ENSCHOG00000011547	TNPO3	99	71.083	ENSUMAG00000006882	TNPO3	99	71.083	Ursus_maritimus
ENSCHOG00000011547	TNPO3	70	71.828	ENSVPAG00000006166	TNPO3	72	71.828	Vicugna_pacos
ENSCHOG00000011547	TNPO3	93	96.154	ENSVVUG00000011004	TNPO3	99	100.000	Vulpes_vulpes
ENSCHOG00000011547	TNPO3	92	65.919	ENSXETG00000015009	tnpo3	99	58.491	Xenopus_tropicalis
ENSCHOG00000011547	TNPO3	99	60.778	ENSXMAG00000013062	tnpo3	99	60.778	Xiphophorus_maculatus