EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000011731 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 9955 bases
Position: chrGeneScaffold_5526:19176-29130
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010356	RRM_1	PF00076.22	1.8e-38	1	3
ENSCHOP00000010356	RRM_1	PF00076.22	1.8e-38	2	3
ENSCHOP00000010356	RRM_1	PF00076.22	1.8e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000011755	RBM47-201	1785	-	ENSCHOP00000010356	594 (aa)	-	UPI0001FA0742

Gene Model

Click here to download ENSCHOG00000011731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000011731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000011731	RBM47	51	74.000	ENSCHOG00000003429	RBM46	57	74.000
ENSCHOG00000011731	RBM47	69	56.604	ENSCHOG00000009089	A1CF	51	69.967

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000011731	RBM47	88	92.405	ENSG00000163694	RBM47	100	98.165	Homo_sapiens
ENSCHOG00000011731	RBM47	88	76.682	ENSAPOG00000011062	rbm47	88	74.324	Acanthochromis_polyacanthus
ENSCHOG00000011731	RBM47	88	88.288	ENSAMEG00000009672	RBM47	88	89.414	Ailuropoda_melanoleuca
ENSCHOG00000011731	RBM47	88	77.354	ENSACIG00000011531	rbm47	89	75.000	Amphilophus_citrinellus
ENSCHOG00000011731	RBM47	88	76.906	ENSAOCG00000022245	rbm47	88	74.550	Amphiprion_ocellaris
ENSCHOG00000011731	RBM47	88	76.906	ENSAPEG00000018304	rbm47	89	74.550	Amphiprion_percula
ENSCHOG00000011731	RBM47	88	75.764	ENSATEG00000018400	rbm47	83	77.069	Anabas_testudineus
ENSCHOG00000011731	RBM47	88	84.340	ENSAPLG00000013974	RBM47	88	85.011	Anas_platyrhynchos
ENSCHOG00000011731	RBM47	88	80.269	ENSACAG00000011833	RBM47	88	80.000	Anolis_carolinensis
ENSCHOG00000011731	RBM47	88	93.671	ENSANAG00000029440	RBM47	87	97.674	Aotus_nancymaae
ENSCHOG00000011731	RBM47	88	76.149	ENSACLG00000016902	rbm47	72	88.235	Astatotilapia_calliptera
ENSCHOG00000011731	RBM47	88	75.219	ENSAMXG00000021794	rbm47	84	77.123	Astyanax_mexicanus
ENSCHOG00000011731	RBM47	88	93.671	ENSBTAG00000002356	RBM47	88	93.671	Bos_taurus
ENSCHOG00000011731	RBM47	88	93.671	ENSCJAG00000019385	RBM47	87	97.093	Callithrix_jacchus
ENSCHOG00000011731	RBM47	84	88.124	ENSCAFG00000015898	RBM47	88	87.640	Canis_familiaris
ENSCHOG00000011731	RBM47	71	87.915	ENSCAFG00020010558	RBM47	79	87.640	Canis_lupus_dingo
ENSCHOG00000011731	RBM47	88	94.937	ENSCHIG00000026214	RBM47	88	94.937	Capra_hircus
ENSCHOG00000011731	RBM47	66	93.939	ENSTSYG00000033612	RBM47	75	94.030	Carlito_syrichta
ENSCHOG00000011731	RBM47	88	85.000	ENSCAPG00000008426	RBM47	88	87.500	Cavia_aperea
ENSCHOG00000011731	RBM47	88	89.414	ENSCPOG00000014100	RBM47	81	96.512	Cavia_porcellus
ENSCHOG00000011731	RBM47	86	64.935	ENSCCAG00000024397	-	85	65.924	Cebus_capucinus
ENSCHOG00000011731	RBM47	88	93.671	ENSCCAG00000030129	-	87	97.093	Cebus_capucinus
ENSCHOG00000011731	RBM47	88	93.671	ENSCATG00000042064	RBM47	87	97.965	Cercocebus_atys
ENSCHOG00000011731	RBM47	88	88.764	ENSCLAG00000001684	RBM47	100	94.340	Chinchilla_lanigera
ENSCHOG00000011731	RBM47	88	93.671	ENSCSAG00000017060	RBM47	100	79.461	Chlorocebus_sabaeus
ENSCHOG00000011731	RBM47	88	86.323	ENSCPBG00000013831	RBM47	89	85.650	Chrysemys_picta_bellii
ENSCHOG00000011731	RBM47	88	93.671	ENSCANG00000019997	RBM47	87	97.674	Colobus_angolensis_palliatus
ENSCHOG00000011731	RBM47	88	87.892	ENSCGRG00001000623	-	88	86.547	Cricetulus_griseus_chok1gshd
ENSCHOG00000011731	RBM47	71	90.116	ENSCGRG00001020102	-	77	90.274	Cricetulus_griseus_chok1gshd
ENSCHOG00000011731	RBM47	88	86.771	ENSCGRG00000007762	-	100	93.711	Cricetulus_griseus_crigri
ENSCHOG00000011731	RBM47	71	89.535	ENSCGRG00000014760	-	73	92.532	Cricetulus_griseus_crigri
ENSCHOG00000011731	RBM47	88	76.116	ENSCSEG00000004545	rbm47	89	73.094	Cynoglossus_semilaevis
ENSCHOG00000011731	RBM47	88	75.730	ENSCVAG00000020144	rbm47	89	74.550	Cyprinodon_variegatus
ENSCHOG00000011731	RBM47	88	74.286	ENSDARG00000061985	rbm47	84	76.777	Danio_rerio
ENSCHOG00000011731	RBM47	88	92.405	ENSDNOG00000046854	RBM47	89	94.937	Dasypus_novemcinctus
ENSCHOG00000011731	RBM47	88	91.139	ENSDORG00000010144	Rbm47	88	91.139	Dipodomys_ordii
ENSCHOG00000011731	RBM47	88	88.616	ENSETEG00000009194	RBM47	88	91.250	Echinops_telfairi
ENSCHOG00000011731	RBM47	65	73.669	ENSEBUG00000011912	rbm47	75	65.060	Eptatretus_burgeri
ENSCHOG00000011731	RBM47	88	94.937	ENSEASG00005008443	RBM47	88	94.937	Equus_asinus_asinus
ENSCHOG00000011731	RBM47	88	94.937	ENSECAG00000004400	RBM47	88	94.937	Equus_caballus
ENSCHOG00000011731	RBM47	63	95.671	ENSEEUG00000001194	RBM47	64	95.671	Erinaceus_europaeus
ENSCHOG00000011731	RBM47	88	74.893	ENSELUG00000006148	rbm47	83	77.570	Esox_lucius
ENSCHOG00000011731	RBM47	88	94.937	ENSFCAG00000012399	RBM47	89	94.937	Felis_catus
ENSCHOG00000011731	RBM47	88	84.753	ENSFALG00000002861	RBM47	88	85.426	Ficedula_albicollis
ENSCHOG00000011731	RBM47	88	88.750	ENSFDAG00000016326	RBM47	89	86.937	Fukomys_damarensis
ENSCHOG00000011731	RBM47	88	77.303	ENSFHEG00000007938	rbm47	89	74.550	Fundulus_heteroclitus
ENSCHOG00000011731	RBM47	88	73.707	ENSGMOG00000014802	rbm47	82	75.765	Gadus_morhua
ENSCHOG00000011731	RBM47	55	93.921	ENSGALG00000014267	RBM47	87	93.313	Gallus_gallus
ENSCHOG00000011731	RBM47	57	85.207	ENSGAFG00000020571	rbm47	81	88.197	Gambusia_affinis
ENSCHOG00000011731	RBM47	88	73.913	ENSGACG00000016223	rbm47	73	85.948	Gasterosteus_aculeatus
ENSCHOG00000011731	RBM47	88	86.771	ENSGAGG00000020051	RBM47	89	85.874	Gopherus_agassizii
ENSCHOG00000011731	RBM47	88	93.671	ENSGGOG00000001367	RBM47	87	97.965	Gorilla_gorilla
ENSCHOG00000011731	RBM47	88	76.149	ENSHBUG00000003520	rbm47	72	88.235	Haplochromis_burtoni
ENSCHOG00000011731	RBM47	71	84.810	ENSHGLG00000016914	RBM47	100	93.082	Heterocephalus_glaber_female
ENSCHOG00000011731	RBM47	88	81.306	ENSHGLG00100003071	-	87	80.856	Heterocephalus_glaber_male
ENSCHOG00000011731	RBM47	88	88.488	ENSHGLG00100014028	-	100	93.082	Heterocephalus_glaber_male
ENSCHOG00000011731	RBM47	88	76.906	ENSHCOG00000002074	rbm47	89	75.281	Hippocampus_comes
ENSCHOG00000011731	RBM47	88	76.543	ENSIPUG00000004743	rbm47	86	77.512	Ictalurus_punctatus
ENSCHOG00000011731	RBM47	88	87.865	ENSSTOG00000004727	RBM47	100	96.226	Ictidomys_tridecemlineatus
ENSCHOG00000011731	RBM47	88	88.608	ENSJJAG00000013823	Rbm47	100	77.517	Jaculus_jaculus
ENSCHOG00000011731	RBM47	88	76.957	ENSKMAG00000000084	rbm47	89	74.215	Kryptolebias_marmoratus
ENSCHOG00000011731	RBM47	88	75.615	ENSLBEG00000008436	rbm47	89	74.324	Labrus_bergylta
ENSCHOG00000011731	RBM47	88	81.941	ENSLACG00000007196	RBM47	89	81.941	Latimeria_chalumnae
ENSCHOG00000011731	RBM47	88	80.405	ENSLOCG00000012966	rbm47	85	78.829	Lepisosteus_oculatus
ENSCHOG00000011731	RBM47	88	90.337	ENSLAFG00000011998	RBM47	90	91.250	Loxodonta_africana
ENSCHOG00000011731	RBM47	88	93.671	ENSMFAG00000037967	RBM47	87	97.965	Macaca_fascicularis
ENSCHOG00000011731	RBM47	88	93.671	ENSMMUG00000012036	RBM47	100	97.938	Macaca_mulatta
ENSCHOG00000011731	RBM47	88	93.671	ENSMNEG00000040774	RBM47	87	98.256	Macaca_nemestrina
ENSCHOG00000011731	RBM47	88	98.734	ENSMLEG00000041432	RBM47	96	98.734	Mandrillus_leucophaeus
ENSCHOG00000011731	RBM47	88	75.877	ENSMAMG00000019143	rbm47	73	87.908	Mastacembelus_armatus
ENSCHOG00000011731	RBM47	88	76.149	ENSMZEG00005023659	rbm47	83	77.069	Maylandia_zebra
ENSCHOG00000011731	RBM47	88	84.753	ENSMGAG00000012226	RBM47	88	85.426	Meleagris_gallopavo
ENSCHOG00000011731	RBM47	88	87.472	ENSMAUG00000006493	Rbm47	100	93.711	Mesocricetus_auratus
ENSCHOG00000011731	RBM47	88	93.671	ENSMICG00000026417	RBM47	89	93.671	Microcebus_murinus
ENSCHOG00000011731	RBM47	88	88.117	ENSMOCG00000021170	Rbm47	100	93.082	Microtus_ochrogaster
ENSCHOG00000011731	RBM47	88	74.836	ENSMMOG00000007260	rbm47	84	77.069	Mola_mola
ENSCHOG00000011731	RBM47	52	82.315	ENSMODG00000015426	-	97	80.064	Monodelphis_domestica
ENSCHOG00000011731	RBM47	88	86.261	ENSMODG00000007003	RBM47	88	85.135	Monodelphis_domestica
ENSCHOG00000011731	RBM47	88	78.104	ENSMODG00000020561	-	85	79.147	Monodelphis_domestica
ENSCHOG00000011731	RBM47	88	75.561	ENSMALG00000005167	rbm47	89	74.550	Monopterus_albus
ENSCHOG00000011731	RBM47	88	87.220	MGP_CAROLIEiJ_G0027258	Rbm47	100	91.824	Mus_caroli
ENSCHOG00000011731	RBM47	88	87.640	ENSMUSG00000070780	Rbm47	100	91.824	Mus_musculus
ENSCHOG00000011731	RBM47	88	87.640	MGP_PahariEiJ_G0017040	Rbm47	100	92.453	Mus_pahari
ENSCHOG00000011731	RBM47	88	87.640	MGP_SPRETEiJ_G0028253	Rbm47	100	91.824	Mus_spretus
ENSCHOG00000011731	RBM47	88	89.865	ENSMPUG00000006177	RBM47	83	91.139	Mustela_putorius_furo
ENSCHOG00000011731	RBM47	88	88.608	ENSMLUG00000000889	RBM47	89	91.139	Myotis_lucifugus
ENSCHOG00000011731	RBM47	88	88.989	ENSNGAG00000003325	Rbm47	100	77.349	Nannospalax_galili
ENSCHOG00000011731	RBM47	88	76.368	ENSNBRG00000015092	rbm47	83	77.305	Neolamprologus_brichardi
ENSCHOG00000011731	RBM47	88	91.139	ENSNLEG00000017151	RBM47	87	97.965	Nomascus_leucogenys
ENSCHOG00000011731	RBM47	61	97.436	ENSMEUG00000009516	-	81	97.436	Notamacropus_eugenii
ENSCHOG00000011731	RBM47	58	96.651	ENSOPRG00000016507	-	58	96.651	Ochotona_princeps
ENSCHOG00000011731	RBM47	88	88.764	ENSODEG00000004873	RBM47	88	88.964	Octodon_degus
ENSCHOG00000011731	RBM47	88	75.000	ENSONIG00000009061	rbm47	83	76.596	Oreochromis_niloticus
ENSCHOG00000011731	RBM47	88	83.259	ENSOANG00000008978	RBM47	89	85.185	Ornithorhynchus_anatinus
ENSCHOG00000011731	RBM47	88	92.405	ENSOCUG00000012034	RBM47	88	92.405	Oryctolagus_cuniculus
ENSCHOG00000011731	RBM47	88	76.906	ENSORLG00000005847	rbm47	89	74.157	Oryzias_latipes
ENSCHOG00000011731	RBM47	88	76.906	ENSORLG00020005154	rbm47	89	74.157	Oryzias_latipes_hni
ENSCHOG00000011731	RBM47	88	77.130	ENSORLG00015000066	rbm47	89	74.382	Oryzias_latipes_hsok
ENSCHOG00000011731	RBM47	88	77.079	ENSOMEG00000010730	rbm47	89	75.000	Oryzias_melastigma
ENSCHOG00000011731	RBM47	88	83.371	ENSOGAG00000025193	-	89	84.810	Otolemur_garnettii
ENSCHOG00000011731	RBM47	88	90.315	ENSOGAG00000029367	-	88	91.139	Otolemur_garnettii
ENSCHOG00000011731	RBM47	88	86.076	ENSOARG00000012711	RBM47	87	87.342	Ovis_aries
ENSCHOG00000011731	RBM47	88	92.405	ENSPPAG00000029763	RBM47	87	97.965	Pan_paniscus
ENSCHOG00000011731	RBM47	88	94.937	ENSPPRG00000012873	RBM47	91	94.937	Panthera_pardus
ENSCHOG00000011731	RBM47	73	87.006	ENSPTIG00000017046	RBM47	89	88.418	Panthera_tigris_altaica
ENSCHOG00000011731	RBM47	88	93.671	ENSPTRG00000016006	RBM47	87	97.965	Pan_troglodytes
ENSCHOG00000011731	RBM47	88	93.671	ENSPANG00000005980	RBM47	87	97.965	Papio_anubis
ENSCHOG00000011731	RBM47	84	78.199	ENSPKIG00000005037	rbm47	84	76.066	Paramormyrops_kingsleyae
ENSCHOG00000011731	RBM47	84	75.765	ENSPKIG00000013431	RBM47	96	71.812	Paramormyrops_kingsleyae
ENSCHOG00000011731	RBM47	75	85.650	ENSPSIG00000017516	RBM47	82	84.978	Pelodiscus_sinensis
ENSCHOG00000011731	RBM47	88	76.180	ENSPMGG00000018540	rbm47	89	74.324	Periophthalmus_magnuspinnatus
ENSCHOG00000011731	RBM47	88	88.090	ENSPEMG00000011088	Rbm47	100	76.510	Peromyscus_maniculatus_bairdii
ENSCHOG00000011731	RBM47	84	80.095	ENSPFOG00000007997	rbm47	82	77.488	Poecilia_formosa
ENSCHOG00000011731	RBM47	84	79.858	ENSPLAG00000002072	rbm47	74	87.869	Poecilia_latipinna
ENSCHOG00000011731	RBM47	88	77.528	ENSPMEG00000017492	rbm47	85	77.488	Poecilia_mexicana
ENSCHOG00000011731	RBM47	84	80.095	ENSPREG00000008456	rbm47	74	88.197	Poecilia_reticulata
ENSCHOG00000011731	RBM47	86	79.128	ENSPPYG00000014688	RBM47	98	65.404	Pongo_abelii
ENSCHOG00000011731	RBM47	81	89.000	ENSPCAG00000011879	RBM47	81	88.000	Procavia_capensis
ENSCHOG00000011731	RBM47	88	87.342	ENSPCOG00000023451	RBM47	89	91.139	Propithecus_coquereli
ENSCHOG00000011731	RBM47	88	91.139	ENSPVAG00000003812	RBM47	88	91.139	Pteropus_vampyrus
ENSCHOG00000011731	RBM47	88	76.149	ENSPNYG00000022868	rbm47	83	77.069	Pundamilia_nyererei
ENSCHOG00000011731	RBM47	88	75.000	ENSPNAG00000007940	rbm47	84	77.594	Pygocentrus_nattereri
ENSCHOG00000011731	RBM47	88	88.090	ENSRNOG00000002408	Rbm47	88	88.608	Rattus_norvegicus
ENSCHOG00000011731	RBM47	88	93.671	ENSRBIG00000039601	RBM47	87	97.674	Rhinopithecus_bieti
ENSCHOG00000011731	RBM47	88	93.671	ENSRROG00000044696	RBM47	87	97.674	Rhinopithecus_roxellana
ENSCHOG00000011731	RBM47	88	92.405	ENSSBOG00000028475	RBM47	88	97.384	Saimiri_boliviensis_boliviensis
ENSCHOG00000011731	RBM47	88	87.342	ENSSHAG00000017576	RBM47	88	87.342	Sarcophilus_harrisii
ENSCHOG00000011731	RBM47	88	74.945	ENSSFOG00015012445	rbm47	84	76.832	Scleropages_formosus
ENSCHOG00000011731	RBM47	88	74.376	ENSSFOG00015024101	RBM47	85	75.829	Scleropages_formosus
ENSCHOG00000011731	RBM47	88	73.799	ENSSMAG00000009744	rbm47	84	74.941	Scophthalmus_maximus
ENSCHOG00000011731	RBM47	88	77.354	ENSSDUG00000022684	rbm47	85	77.305	Seriola_dumerili
ENSCHOG00000011731	RBM47	88	77.354	ENSSLDG00000003109	rbm47	89	74.775	Seriola_lalandi_dorsalis
ENSCHOG00000011731	RBM47	84	87.500	ENSSARG00000001735	RBM47	84	87.277	Sorex_araneus
ENSCHOG00000011731	RBM47	88	84.424	ENSSPUG00000007515	RBM47	89	84.424	Sphenodon_punctatus
ENSCHOG00000011731	RBM47	88	77.978	ENSSPAG00000001257	rbm47	89	75.225	Stegastes_partitus
ENSCHOG00000011731	RBM47	88	93.671	ENSSSCG00000008796	RBM47	88	93.671	Sus_scrofa
ENSCHOG00000011731	RBM47	88	84.081	ENSTGUG00000008705	RBM47	89	84.753	Taeniopygia_guttata
ENSCHOG00000011731	RBM47	88	76.404	ENSTRUG00000014050	rbm47	89	72.748	Takifugu_rubripes
ENSCHOG00000011731	RBM47	88	75.439	ENSTNIG00000006127	rbm47	84	77.541	Tetraodon_nigroviridis
ENSCHOG00000011731	RBM47	71	89.873	ENSTBEG00000001607	RBM47	71	89.873	Tupaia_belangeri
ENSCHOG00000011731	RBM47	88	88.608	ENSTTRG00000002839	RBM47	89	88.764	Tursiops_truncatus
ENSCHOG00000011731	RBM47	88	88.608	ENSUAMG00000021346	RBM47	88	89.640	Ursus_americanus
ENSCHOG00000011731	RBM47	84	89.074	ENSVVUG00000014774	RBM47	88	88.608	Vulpes_vulpes
ENSCHOG00000011731	RBM47	88	80.984	ENSXETG00000012802	rbm47	80	88.754	Xenopus_tropicalis
ENSCHOG00000011731	RBM47	70	84.911	ENSXCOG00000000780	rbm47	75	87.869	Xiphophorus_couchianus
ENSCHOG00000011731	RBM47	88	77.079	ENSXMAG00000009874	rbm47	86	77.251	Xiphophorus_maculatus