EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000011846 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 15762 bases
Position: chrGeneScaffold_1107:5334-21095
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010468	zf-C3HC	PF07967.13	1.1e-36	1	1
ENSCHOP00000010468	Rsm1	PF08600.10	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000011877	ZC3HC1-201	1359	-	ENSCHOP00000010468	452 (aa)	-	UPI0001FA08C4

Gene Model

Click here to download ENSCHOG00000011846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000011846's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000011846	ZC3HC1	99	91.131	ENSG00000091732	ZC3HC1	94	91.131	Homo_sapiens
ENSCHOG00000011846	ZC3HC1	95	46.341	ENSAPOG00000009078	zc3hc1	87	46.341	Acanthochromis_polyacanthus
ENSCHOG00000011846	ZC3HC1	99	89.625	ENSAMEG00000005425	ZC3HC1	90	89.625	Ailuropoda_melanoleuca
ENSCHOG00000011846	ZC3HC1	95	44.396	ENSACIG00000019513	zc3hc1	87	44.396	Amphilophus_citrinellus
ENSCHOG00000011846	ZC3HC1	95	46.563	ENSAOCG00000024310	zc3hc1	87	46.563	Amphiprion_ocellaris
ENSCHOG00000011846	ZC3HC1	95	46.563	ENSAPEG00000004907	zc3hc1	87	46.563	Amphiprion_percula
ENSCHOG00000011846	ZC3HC1	90	46.934	ENSATEG00000016898	zc3hc1	85	46.948	Anabas_testudineus
ENSCHOG00000011846	ZC3HC1	98	61.348	ENSAPLG00000003832	ZC3HC1	99	61.348	Anas_platyrhynchos
ENSCHOG00000011846	ZC3HC1	99	61.171	ENSACAG00000001638	ZC3HC1	90	61.171	Anolis_carolinensis
ENSCHOG00000011846	ZC3HC1	99	88.496	ENSANAG00000022213	ZC3HC1	97	87.255	Aotus_nancymaae
ENSCHOG00000011846	ZC3HC1	95	45.333	ENSACLG00000025033	zc3hc1	94	45.333	Astatotilapia_calliptera
ENSCHOG00000011846	ZC3HC1	94	44.240	ENSAMXG00000036792	zc3hc1	87	44.240	Astyanax_mexicanus
ENSCHOG00000011846	ZC3HC1	99	88.914	ENSBTAG00000011247	ZC3HC1	90	88.914	Bos_taurus
ENSCHOG00000011846	ZC3HC1	99	89.579	ENSCJAG00000010536	ZC3HC1	97	87.255	Callithrix_jacchus
ENSCHOG00000011846	ZC3HC1	99	90.466	ENSCAFG00000029401	-	89	90.466	Canis_familiaris
ENSCHOG00000011846	ZC3HC1	99	90.529	ENSCAFG00000001499	-	89	90.529	Canis_familiaris
ENSCHOG00000011846	ZC3HC1	99	90.687	ENSCAFG00000031850	-	90	90.687	Canis_familiaris
ENSCHOG00000011846	ZC3HC1	99	90.466	ENSCAFG00000028735	-	90	90.466	Canis_familiaris
ENSCHOG00000011846	ZC3HC1	99	89.404	ENSCAFG00020023333	-	90	89.404	Canis_lupus_dingo
ENSCHOG00000011846	ZC3HC1	99	90.466	ENSCAFG00020006829	-	90	90.466	Canis_lupus_dingo
ENSCHOG00000011846	ZC3HC1	99	81.596	ENSCHIG00000014103	ZC3HC1	90	81.596	Capra_hircus
ENSCHOG00000011846	ZC3HC1	99	87.361	ENSTSYG00000002843	ZC3HC1	90	87.361	Carlito_syrichta
ENSCHOG00000011846	ZC3HC1	99	62.555	ENSCAPG00000016300	ZC3HC1	99	61.894	Cavia_aperea
ENSCHOG00000011846	ZC3HC1	99	82.483	ENSCPOG00000014034	ZC3HC1	90	81.818	Cavia_porcellus
ENSCHOG00000011846	ZC3HC1	99	70.732	ENSCCAG00000020384	ZC3HC1	99	88.444	Cebus_capucinus
ENSCHOG00000011846	ZC3HC1	99	90.909	ENSCATG00000023130	ZC3HC1	96	90.110	Cercocebus_atys
ENSCHOG00000011846	ZC3HC1	91	64.390	ENSCLAG00000008260	ZC3HC1	88	64.878	Chinchilla_lanigera
ENSCHOG00000011846	ZC3HC1	81	90.385	ENSCSAG00000009881	ZC3HC1	96	90.385	Chlorocebus_sabaeus
ENSCHOG00000011846	ZC3HC1	99	68.212	ENSCPBG00000017519	ZC3HC1	90	68.212	Chrysemys_picta_bellii
ENSCHOG00000011846	ZC3HC1	50	32.618	ENSCING00000004440	-	54	32.618	Ciona_intestinalis
ENSCHOG00000011846	ZC3HC1	99	90.687	ENSCANG00000029091	ZC3HC1	97	87.255	Colobus_angolensis_palliatus
ENSCHOG00000011846	ZC3HC1	99	86.031	ENSCGRG00001018805	Zc3hc1	90	86.031	Cricetulus_griseus_chok1gshd
ENSCHOG00000011846	ZC3HC1	99	84.922	ENSCGRG00000017114	Zc3hc1	90	84.922	Cricetulus_griseus_crigri
ENSCHOG00000011846	ZC3HC1	96	45.455	ENSCSEG00000009284	zc3hc1	85	45.254	Cynoglossus_semilaevis
ENSCHOG00000011846	ZC3HC1	95	45.089	ENSCVAG00000011566	zc3hc1	86	45.089	Cyprinodon_variegatus
ENSCHOG00000011846	ZC3HC1	95	48.984	ENSDARG00000062651	zc3hc1	86	48.984	Danio_rerio
ENSCHOG00000011846	ZC3HC1	99	92.018	ENSDNOG00000045016	ZC3HC1	90	92.018	Dasypus_novemcinctus
ENSCHOG00000011846	ZC3HC1	91	84.504	ENSDORG00000008697	Zc3hc1	89	84.504	Dipodomys_ordii
ENSCHOG00000011846	ZC3HC1	99	90.889	ENSEASG00005008789	ZC3HC1	96	90.889	Equus_asinus_asinus
ENSCHOG00000011846	ZC3HC1	99	90.889	ENSECAG00000017886	ZC3HC1	89	90.889	Equus_caballus
ENSCHOG00000011846	ZC3HC1	73	80.503	ENSEEUG00000003123	ZC3HC1	66	80.503	Erinaceus_europaeus
ENSCHOG00000011846	ZC3HC1	97	45.119	ENSELUG00000023168	zc3hc1	89	45.671	Esox_lucius
ENSCHOG00000011846	ZC3HC1	99	89.135	ENSFCAG00000010429	ZC3HC1	96	87.805	Felis_catus
ENSCHOG00000011846	ZC3HC1	99	60.215	ENSFALG00000005006	ZC3HC1	99	60.215	Ficedula_albicollis
ENSCHOG00000011846	ZC3HC1	99	85.809	ENSFDAG00000019897	ZC3HC1	90	85.809	Fukomys_damarensis
ENSCHOG00000011846	ZC3HC1	95	45.861	ENSFHEG00000020149	zc3hc1	86	45.495	Fundulus_heteroclitus
ENSCHOG00000011846	ZC3HC1	94	44.344	ENSGMOG00000002914	zc3hc1	87	44.344	Gadus_morhua
ENSCHOG00000011846	ZC3HC1	99	63.135	ENSGALG00000008003	ZC3HC1	91	63.135	Gallus_gallus
ENSCHOG00000011846	ZC3HC1	99	44.924	ENSGAFG00000016095	zc3hc1	90	44.946	Gambusia_affinis
ENSCHOG00000011846	ZC3HC1	94	46.501	ENSGACG00000019706	zc3hc1	86	46.517	Gasterosteus_aculeatus
ENSCHOG00000011846	ZC3HC1	86	68.895	ENSGAGG00000016106	ZC3HC1	99	68.895	Gopherus_agassizii
ENSCHOG00000011846	ZC3HC1	99	90.909	ENSGGOG00000015504	ZC3HC1	97	88.235	Gorilla_gorilla
ENSCHOG00000011846	ZC3HC1	95	45.333	ENSHBUG00000008347	zc3hc1	87	45.333	Haplochromis_burtoni
ENSCHOG00000011846	ZC3HC1	99	87.361	ENSHGLG00000005085	ZC3HC1	90	87.361	Heterocephalus_glaber_female
ENSCHOG00000011846	ZC3HC1	99	87.140	ENSHGLG00100011395	ZC3HC1	90	87.140	Heterocephalus_glaber_male
ENSCHOG00000011846	ZC3HC1	95	44.064	ENSHCOG00000014309	zc3hc1	86	44.647	Hippocampus_comes
ENSCHOG00000011846	ZC3HC1	99	88.692	ENSSTOG00000023599	-	90	88.692	Ictidomys_tridecemlineatus
ENSCHOG00000011846	ZC3HC1	95	46.460	ENSKMAG00000015315	zc3hc1	81	46.239	Kryptolebias_marmoratus
ENSCHOG00000011846	ZC3HC1	94	45.733	ENSLBEG00000017325	zc3hc1	92	45.733	Labrus_bergylta
ENSCHOG00000011846	ZC3HC1	77	57.851	ENSLACG00000013032	ZC3HC1	86	57.851	Latimeria_chalumnae
ENSCHOG00000011846	ZC3HC1	95	53.986	ENSLOCG00000015963	zc3hc1	87	54.545	Lepisosteus_oculatus
ENSCHOG00000011846	ZC3HC1	99	88.132	ENSLAFG00000001292	ZC3HC1	90	88.132	Loxodonta_africana
ENSCHOG00000011846	ZC3HC1	99	91.131	ENSMFAG00000030176	ZC3HC1	97	90.358	Macaca_fascicularis
ENSCHOG00000011846	ZC3HC1	99	89.823	ENSMMUG00000006155	ZC3HC1	98	90.608	Macaca_mulatta
ENSCHOG00000011846	ZC3HC1	99	91.353	ENSMNEG00000011833	ZC3HC1	97	90.634	Macaca_nemestrina
ENSCHOG00000011846	ZC3HC1	99	91.131	ENSMLEG00000027328	ZC3HC1	97	90.659	Mandrillus_leucophaeus
ENSCHOG00000011846	ZC3HC1	95	46.000	ENSMAMG00000010691	zc3hc1	87	46.018	Mastacembelus_armatus
ENSCHOG00000011846	ZC3HC1	95	44.667	ENSMZEG00005007142	zc3hc1	87	44.667	Maylandia_zebra
ENSCHOG00000011846	ZC3HC1	99	61.926	ENSMGAG00000002977	ZC3HC1	91	63.239	Meleagris_gallopavo
ENSCHOG00000011846	ZC3HC1	90	79.661	ENSMAUG00000017032	Zc3hc1	91	79.661	Mesocricetus_auratus
ENSCHOG00000011846	ZC3HC1	99	89.579	ENSMICG00000009167	ZC3HC1	90	89.579	Microcebus_murinus
ENSCHOG00000011846	ZC3HC1	99	84.479	ENSMOCG00000015239	Zc3hc1	90	84.479	Microtus_ochrogaster
ENSCHOG00000011846	ZC3HC1	95	43.333	ENSMMOG00000002204	zc3hc1	98	43.111	Mola_mola
ENSCHOG00000011846	ZC3HC1	99	64.606	ENSMODG00000014630	ZC3HC1	89	64.606	Monodelphis_domestica
ENSCHOG00000011846	ZC3HC1	95	46.171	ENSMALG00000014447	zc3hc1	87	46.325	Monopterus_albus
ENSCHOG00000011846	ZC3HC1	99	85.746	MGP_CAROLIEiJ_G0028183	Zc3hc1	89	85.746	Mus_caroli
ENSCHOG00000011846	ZC3HC1	99	85.523	ENSMUSG00000039130	Zc3hc1	89	85.523	Mus_musculus
ENSCHOG00000011846	ZC3HC1	99	78.444	MGP_PahariEiJ_G0021941	Zc3hc1	89	78.444	Mus_pahari
ENSCHOG00000011846	ZC3HC1	99	85.523	MGP_SPRETEiJ_G0029183	Zc3hc1	88	86.644	Mus_spretus
ENSCHOG00000011846	ZC3HC1	95	88.140	ENSMPUG00000005297	ZC3HC1	85	88.140	Mustela_putorius_furo
ENSCHOG00000011846	ZC3HC1	75	83.673	ENSMLUG00000029228	-	99	83.673	Myotis_lucifugus
ENSCHOG00000011846	ZC3HC1	99	89.207	ENSMLUG00000000063	-	90	89.207	Myotis_lucifugus
ENSCHOG00000011846	ZC3HC1	99	86.283	ENSNGAG00000019014	Zc3hc1	90	86.283	Nannospalax_galili
ENSCHOG00000011846	ZC3HC1	95	44.766	ENSNBRG00000004577	zc3hc1	87	44.766	Neolamprologus_brichardi
ENSCHOG00000011846	ZC3HC1	99	90.244	ENSNLEG00000012698	ZC3HC1	97	90.055	Nomascus_leucogenys
ENSCHOG00000011846	ZC3HC1	99	81.596	ENSMEUG00000011023	ZC3HC1	90	81.596	Notamacropus_eugenii
ENSCHOG00000011846	ZC3HC1	62	81.340	ENSOPRG00000007867	-	57	81.340	Ochotona_princeps
ENSCHOG00000011846	ZC3HC1	99	82.040	ENSODEG00000014604	ZC3HC1	90	81.818	Octodon_degus
ENSCHOG00000011846	ZC3HC1	95	44.889	ENSONIG00000011644	zc3hc1	87	45.575	Oreochromis_niloticus
ENSCHOG00000011846	ZC3HC1	99	69.197	ENSOANG00000011460	ZC3HC1	99	69.197	Ornithorhynchus_anatinus
ENSCHOG00000011846	ZC3HC1	99	85.683	ENSOCUG00000017137	ZC3HC1	90	85.683	Oryctolagus_cuniculus
ENSCHOG00000011846	ZC3HC1	95	44.989	ENSORLG00000014409	zc3hc1	86	44.989	Oryzias_latipes
ENSCHOG00000011846	ZC3HC1	95	45.676	ENSORLG00020015874	zc3hc1	86	45.676	Oryzias_latipes_hni
ENSCHOG00000011846	ZC3HC1	95	45.233	ENSORLG00015014641	zc3hc1	86	45.233	Oryzias_latipes_hsok
ENSCHOG00000011846	ZC3HC1	95	46.188	ENSOMEG00000000215	zc3hc1	86	46.102	Oryzias_melastigma
ENSCHOG00000011846	ZC3HC1	95	46.413	ENSOMEG00000020604	zc3hc1	85	46.413	Oryzias_melastigma
ENSCHOG00000011846	ZC3HC1	99	83.814	ENSOGAG00000026193	ZC3HC1	90	83.814	Otolemur_garnettii
ENSCHOG00000011846	ZC3HC1	99	88.546	ENSOARG00000004907	ZC3HC1	89	88.546	Ovis_aries
ENSCHOG00000011846	ZC3HC1	99	91.131	ENSPPAG00000043172	ZC3HC1	97	88.235	Pan_paniscus
ENSCHOG00000011846	ZC3HC1	99	88.470	ENSPPRG00000001004	ZC3HC1	96	87.140	Panthera_pardus
ENSCHOG00000011846	ZC3HC1	99	88.914	ENSPTIG00000007823	ZC3HC1	96	87.583	Panthera_tigris_altaica
ENSCHOG00000011846	ZC3HC1	99	90.909	ENSPTRG00000019685	ZC3HC1	97	88.235	Pan_troglodytes
ENSCHOG00000011846	ZC3HC1	99	89.602	ENSPANG00000014229	ZC3HC1	96	89.381	Papio_anubis
ENSCHOG00000011846	ZC3HC1	95	48.975	ENSPKIG00000007172	zc3hc1	87	48.975	Paramormyrops_kingsleyae
ENSCHOG00000011846	ZC3HC1	99	61.874	ENSPSIG00000016646	ZC3HC1	90	62.826	Pelodiscus_sinensis
ENSCHOG00000011846	ZC3HC1	96	42.129	ENSPMGG00000003548	zc3hc1	90	40.465	Periophthalmus_magnuspinnatus
ENSCHOG00000011846	ZC3HC1	99	85.588	ENSPEMG00000000514	Zc3hc1	90	85.588	Peromyscus_maniculatus_bairdii
ENSCHOG00000011846	ZC3HC1	99	78.271	ENSPCIG00000020619	ZC3HC1	99	80.620	Phascolarctos_cinereus
ENSCHOG00000011846	ZC3HC1	97	45.815	ENSPFOG00000003466	zc3hc1	88	45.833	Poecilia_formosa
ENSCHOG00000011846	ZC3HC1	97	45.374	ENSPLAG00000022211	zc3hc1	88	45.395	Poecilia_latipinna
ENSCHOG00000011846	ZC3HC1	97	45.815	ENSPMEG00000001458	zc3hc1	89	45.667	Poecilia_mexicana
ENSCHOG00000011846	ZC3HC1	97	45.374	ENSPREG00000004004	zc3hc1	88	45.395	Poecilia_reticulata
ENSCHOG00000011846	ZC3HC1	99	82.561	ENSPPYG00000017998	ZC3HC1	90	82.561	Pongo_abelii
ENSCHOG00000011846	ZC3HC1	99	84.701	ENSPCAG00000001182	ZC3HC1	98	84.701	Procavia_capensis
ENSCHOG00000011846	ZC3HC1	99	90.466	ENSPCOG00000017354	ZC3HC1	90	90.466	Propithecus_coquereli
ENSCHOG00000011846	ZC3HC1	99	84.257	ENSPVAG00000003195	ZC3HC1	90	85.144	Pteropus_vampyrus
ENSCHOG00000011846	ZC3HC1	95	44.667	ENSPNYG00000020692	zc3hc1	87	44.667	Pundamilia_nyererei
ENSCHOG00000011846	ZC3HC1	94	45.227	ENSPNAG00000020746	zc3hc1	87	45.227	Pygocentrus_nattereri
ENSCHOG00000011846	ZC3HC1	99	84.513	ENSRNOG00000010154	Zc3hc1	90	84.513	Rattus_norvegicus
ENSCHOG00000011846	ZC3HC1	99	90.687	ENSRBIG00000029409	ZC3HC1	99	90.687	Rhinopithecus_bieti
ENSCHOG00000011846	ZC3HC1	99	90.687	ENSRROG00000041831	ZC3HC1	97	90.083	Rhinopithecus_roxellana
ENSCHOG00000011846	ZC3HC1	98	77.477	ENSSBOG00000032787	ZC3HC1	97	88.725	Saimiri_boliviensis_boliviensis
ENSCHOG00000011846	ZC3HC1	99	81.015	ENSSHAG00000002529	ZC3HC1	97	81.015	Sarcophilus_harrisii
ENSCHOG00000011846	ZC3HC1	95	50.909	ENSSFOG00015003667	zc3hc1	83	50.909	Scleropages_formosus
ENSCHOG00000011846	ZC3HC1	96	45.695	ENSSMAG00000000647	zc3hc1	78	46.358	Scophthalmus_maximus
ENSCHOG00000011846	ZC3HC1	95	47.204	ENSSDUG00000004241	zc3hc1	85	47.216	Seriola_dumerili
ENSCHOG00000011846	ZC3HC1	95	47.545	ENSSLDG00000025056	zc3hc1	85	47.556	Seriola_lalandi_dorsalis
ENSCHOG00000011846	ZC3HC1	99	77.556	ENSSARG00000012013	ZC3HC1	90	77.556	Sorex_araneus
ENSCHOG00000011846	ZC3HC1	95	57.701	ENSSPUG00000000778	ZC3HC1	86	57.701	Sphenodon_punctatus
ENSCHOG00000011846	ZC3HC1	95	47.333	ENSSPAG00000020041	zc3hc1	87	47.345	Stegastes_partitus
ENSCHOG00000011846	ZC3HC1	99	89.579	ENSSSCG00000016565	ZC3HC1	99	89.406	Sus_scrofa
ENSCHOG00000011846	ZC3HC1	54	58.436	ENSTGUG00000016262	ZC3HC1	99	58.436	Taeniopygia_guttata
ENSCHOG00000011846	ZC3HC1	99	44.850	ENSTRUG00000020077	zc3hc1	89	44.850	Takifugu_rubripes
ENSCHOG00000011846	ZC3HC1	96	45.556	ENSTNIG00000007585	zc3hc1	92	45.575	Tetraodon_nigroviridis
ENSCHOG00000011846	ZC3HC1	99	78.714	ENSTBEG00000005216	ZC3HC1	90	78.714	Tupaia_belangeri
ENSCHOG00000011846	ZC3HC1	99	89.800	ENSTTRG00000008458	ZC3HC1	94	89.800	Tursiops_truncatus
ENSCHOG00000011846	ZC3HC1	99	90.244	ENSUAMG00000020249	ZC3HC1	90	90.244	Ursus_americanus
ENSCHOG00000011846	ZC3HC1	99	90.022	ENSUMAG00000009268	ZC3HC1	90	90.022	Ursus_maritimus
ENSCHOG00000011846	ZC3HC1	75	91.489	ENSVPAG00000010846	ZC3HC1	67	91.489	Vicugna_pacos
ENSCHOG00000011846	ZC3HC1	95	90.255	ENSVVUG00000012386	ZC3HC1	89	90.255	Vulpes_vulpes
ENSCHOG00000011846	ZC3HC1	90	54.699	ENSXETG00000033900	zc3hc1	85	54.699	Xenopus_tropicalis
ENSCHOG00000011846	ZC3HC1	99	43.844	ENSXCOG00000013570	zc3hc1	96	39.556	Xiphophorus_couchianus
ENSCHOG00000011846	ZC3HC1	99	44.924	ENSXMAG00000010979	zc3hc1	96	44.516	Xiphophorus_maculatus