EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000011915 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 27038 bases
Position: chrGeneScaffold_2660:18604-45641
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010538	RF-1	PF00472.20	1.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000011954	-	1224	-	ENSCHOP00000010538	408 (aa)	-	UPI0001FA09CF

Gene Model

Click here to download ENSCHOG00000011915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000011915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000011915	-	58	44.255	ENSCHOG00000006884	MTRF1L	61	44.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000011915	-	100	79.218	ENSG00000120662	MTRF1	92	79.218	Homo_sapiens
ENSCHOG00000011915	-	84	53.736	ENSAPOG00000010181	mtrf1	86	53.736	Acanthochromis_polyacanthus
ENSCHOG00000011915	-	100	78.729	ENSAMEG00000008696	MTRF1	92	78.729	Ailuropoda_melanoleuca
ENSCHOG00000011915	-	50	70.297	ENSACIG00000001495	mtrf1	81	70.297	Amphilophus_citrinellus
ENSCHOG00000011915	-	86	55.367	ENSAOCG00000002832	mtrf1	80	55.367	Amphiprion_ocellaris
ENSCHOG00000011915	-	86	55.085	ENSAPEG00000014844	mtrf1	80	55.085	Amphiprion_percula
ENSCHOG00000011915	-	86	53.541	ENSATEG00000017403	mtrf1	84	53.541	Anabas_testudineus
ENSCHOG00000011915	-	99	60.794	ENSAPLG00000009317	MTRF1	90	60.794	Anas_platyrhynchos
ENSCHOG00000011915	-	89	62.022	ENSACAG00000000897	MTRF1	82	62.022	Anolis_carolinensis
ENSCHOG00000011915	-	87	69.468	ENSANAG00000025310	-	87	74.847	Aotus_nancymaae
ENSCHOG00000011915	-	97	73.935	ENSANAG00000023063	-	92	73.935	Aotus_nancymaae
ENSCHOG00000011915	-	86	54.749	ENSACLG00000023945	mtrf1	80	54.749	Astatotilapia_calliptera
ENSCHOG00000011915	-	50	69.307	ENSAMXG00000031859	mtrf1	84	69.307	Astyanax_mexicanus
ENSCHOG00000011915	-	99	80.049	ENSBTAG00000012260	MTRF1	97	80.049	Bos_taurus
ENSCHOG00000011915	-	100	77.262	ENSCJAG00000017739	MTRF1	92	77.262	Callithrix_jacchus
ENSCHOG00000011915	-	100	79.024	ENSCAFG00000004795	MTRF1	92	79.024	Canis_familiaris
ENSCHOG00000011915	-	100	79.024	ENSCAFG00020018178	MTRF1	92	79.024	Canis_lupus_dingo
ENSCHOG00000011915	-	100	79.707	ENSCHIG00000011810	MTRF1	92	79.707	Capra_hircus
ENSCHOG00000011915	-	100	77.017	ENSTSYG00000006976	MTRF1	92	77.017	Carlito_syrichta
ENSCHOG00000011915	-	97	77.722	ENSCAPG00000013163	MTRF1	91	77.722	Cavia_aperea
ENSCHOG00000011915	-	100	76.528	ENSCPOG00000005264	MTRF1	92	76.528	Cavia_porcellus
ENSCHOG00000011915	-	100	77.995	ENSCCAG00000035116	MTRF1	92	77.995	Cebus_capucinus
ENSCHOG00000011915	-	100	78.973	ENSCATG00000009909	MTRF1	92	78.973	Cercocebus_atys
ENSCHOG00000011915	-	100	76.284	ENSCLAG00000000582	MTRF1	92	76.284	Chinchilla_lanigera
ENSCHOG00000011915	-	100	78.973	ENSCSAG00000017835	MTRF1	92	78.973	Chlorocebus_sabaeus
ENSCHOG00000011915	-	100	62.287	ENSCPBG00000007969	MTRF1	91	62.287	Chrysemys_picta_bellii
ENSCHOG00000011915	-	100	78.729	ENSCANG00000040353	MTRF1	92	78.729	Colobus_angolensis_palliatus
ENSCHOG00000011915	-	100	73.839	ENSCGRG00001003065	Mtrf1	92	73.839	Cricetulus_griseus_chok1gshd
ENSCHOG00000011915	-	100	73.839	ENSCGRG00000002570	Mtrf1	92	73.839	Cricetulus_griseus_crigri
ENSCHOG00000011915	-	91	51.743	ENSCSEG00000005667	mtrf1	83	51.743	Cynoglossus_semilaevis
ENSCHOG00000011915	-	93	51.832	ENSCVAG00000021729	mtrf1	88	51.832	Cyprinodon_variegatus
ENSCHOG00000011915	-	100	81.022	ENSDNOG00000034196	MTRF1	80	93.522	Dasypus_novemcinctus
ENSCHOG00000011915	-	100	77.017	ENSDORG00000016429	Mtrf1	92	77.017	Dipodomys_ordii
ENSCHOG00000011915	-	100	75.795	ENSETEG00000014811	MTRF1	92	75.795	Echinops_telfairi
ENSCHOG00000011915	-	100	79.218	ENSEASG00005015715	MTRF1	92	79.218	Equus_asinus_asinus
ENSCHOG00000011915	-	100	78.729	ENSECAG00000014389	MTRF1	94	78.729	Equus_caballus
ENSCHOG00000011915	-	100	58.537	ENSEEUG00000004450	-	92	58.537	Erinaceus_europaeus
ENSCHOG00000011915	-	86	51.282	ENSELUG00000006544	mtrf1	81	51.282	Esox_lucius
ENSCHOG00000011915	-	100	77.751	ENSFCAG00000031635	MTRF1	92	77.751	Felis_catus
ENSCHOG00000011915	-	86	63.739	ENSFALG00000008036	MTRF1	88	63.739	Ficedula_albicollis
ENSCHOG00000011915	-	100	75.306	ENSFDAG00000017881	MTRF1	92	75.306	Fukomys_damarensis
ENSCHOG00000011915	-	86	53.143	ENSFHEG00000019043	mtrf1	80	53.143	Fundulus_heteroclitus
ENSCHOG00000011915	-	85	49.713	ENSGMOG00000008608	mtrf1	91	49.713	Gadus_morhua
ENSCHOG00000011915	-	88	66.389	ENSGALG00000016951	MTRF1	79	66.389	Gallus_gallus
ENSCHOG00000011915	-	90	51.194	ENSGAFG00000007093	mtrf1	85	51.194	Gambusia_affinis
ENSCHOG00000011915	-	85	53.448	ENSGACG00000013728	mtrf1	91	53.448	Gasterosteus_aculeatus
ENSCHOG00000011915	-	76	69.132	ENSGAGG00000025696	MTRF1	99	69.132	Gopherus_agassizii
ENSCHOG00000011915	-	100	78.729	ENSGGOG00000002529	MTRF1	92	78.729	Gorilla_gorilla
ENSCHOG00000011915	-	100	76.773	ENSHGLG00000003210	MTRF1	92	76.773	Heterocephalus_glaber_female
ENSCHOG00000011915	-	100	77.017	ENSHGLG00100011843	MTRF1	92	77.017	Heterocephalus_glaber_male
ENSCHOG00000011915	-	86	50.997	ENSHCOG00000009449	mtrf1	80	50.997	Hippocampus_comes
ENSCHOG00000011915	-	100	77.017	ENSSTOG00000021682	MTRF1	92	77.017	Ictidomys_tridecemlineatus
ENSCHOG00000011915	-	100	75.550	ENSJJAG00000017590	Mtrf1	92	75.550	Jaculus_jaculus
ENSCHOG00000011915	-	86	54.261	ENSKMAG00000003231	mtrf1	78	54.261	Kryptolebias_marmoratus
ENSCHOG00000011915	-	50	69.307	ENSLBEG00000023151	mtrf1	81	69.307	Labrus_bergylta
ENSCHOG00000011915	-	50	69.307	ENSLBEG00000027169	-	81	69.307	Labrus_bergylta
ENSCHOG00000011915	-	89	62.060	ENSLACG00000010582	MTRF1	83	62.060	Latimeria_chalumnae
ENSCHOG00000011915	-	92	53.989	ENSLOCG00000005937	MTRF1	83	53.989	Lepisosteus_oculatus
ENSCHOG00000011915	-	100	76.528	ENSLAFG00000022177	-	92	76.528	Loxodonta_africana
ENSCHOG00000011915	-	99	63.457	ENSLAFG00000030499	-	90	63.457	Loxodonta_africana
ENSCHOG00000011915	-	100	78.973	ENSMFAG00000037972	MTRF1	92	78.973	Macaca_fascicularis
ENSCHOG00000011915	-	100	79.218	ENSMNEG00000035487	MTRF1	92	79.218	Macaca_nemestrina
ENSCHOG00000011915	-	100	79.218	ENSMLEG00000033582	MTRF1	92	79.218	Mandrillus_leucophaeus
ENSCHOG00000011915	-	82	54.867	ENSMAMG00000022048	mtrf1	76	54.867	Mastacembelus_armatus
ENSCHOG00000011915	-	86	54.749	ENSMZEG00005017922	mtrf1	80	54.749	Maylandia_zebra
ENSCHOG00000011915	-	88	66.111	ENSMGAG00000014971	MTRF1	86	66.111	Meleagris_gallopavo
ENSCHOG00000011915	-	100	75.306	ENSMAUG00000011661	Mtrf1	92	75.306	Mesocricetus_auratus
ENSCHOG00000011915	-	100	79.707	ENSMICG00000033131	MTRF1	96	79.707	Microcebus_murinus
ENSCHOG00000011915	-	100	73.105	ENSMOCG00000011945	Mtrf1	92	73.105	Microtus_ochrogaster
ENSCHOG00000011915	-	50	60.591	ENSMMOG00000013394	mtrf1	82	60.591	Mola_mola
ENSCHOG00000011915	-	97	68.342	ENSMODG00000014772	MTRF1	90	68.342	Monodelphis_domestica
ENSCHOG00000011915	-	85	52.857	ENSMALG00000013274	mtrf1	80	52.857	Monopterus_albus
ENSCHOG00000011915	-	100	73.105	MGP_CAROLIEiJ_G0019539	Mtrf1	91	73.105	Mus_caroli
ENSCHOG00000011915	-	100	74.328	ENSMUSG00000022022	Mtrf1	92	74.328	Mus_musculus
ENSCHOG00000011915	-	100	73.839	MGP_PahariEiJ_G0030557	Mtrf1	92	73.839	Mus_pahari
ENSCHOG00000011915	-	100	74.083	MGP_SPRETEiJ_G0020435	Mtrf1	92	74.083	Mus_spretus
ENSCHOG00000011915	-	100	78.484	ENSMPUG00000001874	MTRF1	92	78.484	Mustela_putorius_furo
ENSCHOG00000011915	-	100	77.995	ENSMLUG00000017237	MTRF1	92	77.995	Myotis_lucifugus
ENSCHOG00000011915	-	100	76.284	ENSNGAG00000014460	Mtrf1	92	76.284	Nannospalax_galili
ENSCHOG00000011915	-	50	68.812	ENSNBRG00000004634	mtrf1	85	68.812	Neolamprologus_brichardi
ENSCHOG00000011915	-	100	78.973	ENSNLEG00000001236	MTRF1	92	78.973	Nomascus_leucogenys
ENSCHOG00000011915	-	100	72.683	ENSMEUG00000001846	MTRF1	92	72.683	Notamacropus_eugenii
ENSCHOG00000011915	-	81	48.788	ENSOPRG00000006450	-	100	48.788	Ochotona_princeps
ENSCHOG00000011915	-	100	73.350	ENSODEG00000005782	MTRF1	92	73.350	Octodon_degus
ENSCHOG00000011915	-	86	54.830	ENSONIG00000012476	mtrf1	91	54.830	Oreochromis_niloticus
ENSCHOG00000011915	-	59	75.410	ENSOANG00000003383	-	77	75.410	Ornithorhynchus_anatinus
ENSCHOG00000011915	-	100	76.528	ENSOCUG00000025207	MTRF1	92	76.528	Oryctolagus_cuniculus
ENSCHOG00000011915	-	86	54.545	ENSORLG00000003225	mtrf1	80	54.545	Oryzias_latipes
ENSCHOG00000011915	-	86	55.114	ENSORLG00020021048	mtrf1	79	55.114	Oryzias_latipes_hni
ENSCHOG00000011915	-	86	54.261	ENSORLG00015020957	mtrf1	80	54.261	Oryzias_latipes_hsok
ENSCHOG00000011915	-	85	54.701	ENSOMEG00000002022	mtrf1	80	54.701	Oryzias_melastigma
ENSCHOG00000011915	-	70	68.750	ENSOGAG00000026411	-	87	68.750	Otolemur_garnettii
ENSCHOG00000011915	-	100	76.039	ENSOGAG00000009719	-	92	76.039	Otolemur_garnettii
ENSCHOG00000011915	-	100	79.218	ENSOARG00000006994	MTRF1	92	79.218	Ovis_aries
ENSCHOG00000011915	-	100	79.218	ENSPPAG00000000050	MTRF1	92	79.218	Pan_paniscus
ENSCHOG00000011915	-	100	77.751	ENSPPRG00000009511	MTRF1	92	77.751	Panthera_pardus
ENSCHOG00000011915	-	100	77.995	ENSPTIG00000006673	MTRF1	92	77.995	Panthera_tigris_altaica
ENSCHOG00000011915	-	100	79.218	ENSPTRG00000005815	MTRF1	92	79.218	Pan_troglodytes
ENSCHOG00000011915	-	100	79.218	ENSPANG00000010809	MTRF1	92	79.218	Papio_anubis
ENSCHOG00000011915	-	86	52.991	ENSPKIG00000015711	mtrf1	82	52.991	Paramormyrops_kingsleyae
ENSCHOG00000011915	-	100	60.341	ENSPSIG00000004773	MTRF1	91	60.341	Pelodiscus_sinensis
ENSCHOG00000011915	-	50	69.307	ENSPMGG00000006724	mtrf1	82	69.307	Periophthalmus_magnuspinnatus
ENSCHOG00000011915	-	100	74.878	ENSPEMG00000020982	Mtrf1	92	74.878	Peromyscus_maniculatus_bairdii
ENSCHOG00000011915	-	83	48.266	ENSPMAG00000009849	mtrf1	98	48.688	Petromyzon_marinus
ENSCHOG00000011915	-	100	67.561	ENSPCIG00000012940	MTRF1	92	67.561	Phascolarctos_cinereus
ENSCHOG00000011915	-	86	54.857	ENSPFOG00000000254	mtrf1	80	54.857	Poecilia_formosa
ENSCHOG00000011915	-	86	54.857	ENSPLAG00000014280	mtrf1	80	54.857	Poecilia_latipinna
ENSCHOG00000011915	-	86	54.571	ENSPMEG00000023245	mtrf1	80	54.571	Poecilia_mexicana
ENSCHOG00000011915	-	50	65.025	ENSPREG00000018619	mtrf1	83	65.025	Poecilia_reticulata
ENSCHOG00000011915	-	100	77.751	ENSPPYG00000005313	MTRF1	92	77.751	Pongo_abelii
ENSCHOG00000011915	-	100	79.951	ENSPCOG00000018133	MTRF1	92	79.951	Propithecus_coquereli
ENSCHOG00000011915	-	100	78.240	ENSPVAG00000008573	MTRF1	92	78.240	Pteropus_vampyrus
ENSCHOG00000011915	-	50	69.802	ENSPNYG00000004357	mtrf1	82	69.802	Pundamilia_nyererei
ENSCHOG00000011915	-	86	51.541	ENSPNAG00000010682	mtrf1	82	51.541	Pygocentrus_nattereri
ENSCHOG00000011915	-	100	73.902	ENSRNOG00000047106	Mtrf1	93	90.265	Rattus_norvegicus
ENSCHOG00000011915	-	100	79.218	ENSRBIG00000007069	MTRF1	92	79.218	Rhinopithecus_bieti
ENSCHOG00000011915	-	100	79.218	ENSRROG00000035345	MTRF1	92	79.218	Rhinopithecus_roxellana
ENSCHOG00000011915	-	83	79.765	ENSSBOG00000004572	MTRF1	90	79.765	Saimiri_boliviensis_boliviensis
ENSCHOG00000011915	-	100	68.370	ENSSHAG00000018109	MTRF1	100	68.370	Sarcophilus_harrisii
ENSCHOG00000011915	-	88	54.098	ENSSFOG00015006191	mtrf1	83	54.098	Scleropages_formosus
ENSCHOG00000011915	-	86	53.258	ENSSMAG00000015740	mtrf1	79	53.258	Scophthalmus_maximus
ENSCHOG00000011915	-	86	55.524	ENSSDUG00000022608	mtrf1	69	55.524	Seriola_dumerili
ENSCHOG00000011915	-	86	55.807	ENSSLDG00000013584	mtrf1	69	55.807	Seriola_lalandi_dorsalis
ENSCHOG00000011915	-	100	73.839	ENSSARG00000002306	MTRF1	92	73.839	Sorex_araneus
ENSCHOG00000011915	-	50	74.752	ENSSPUG00000007354	MTRF1	83	74.752	Sphenodon_punctatus
ENSCHOG00000011915	-	86	54.108	ENSSPAG00000000881	mtrf1	80	54.108	Stegastes_partitus
ENSCHOG00000011915	-	100	77.262	ENSSSCG00000009436	MTRF1	92	77.262	Sus_scrofa
ENSCHOG00000011915	-	91	62.534	ENSTGUG00000012422	MTRF1	89	62.534	Taeniopygia_guttata
ENSCHOG00000011915	-	86	53.977	ENSTRUG00000000396	mtrf1	78	53.977	Takifugu_rubripes
ENSCHOG00000011915	-	86	54.701	ENSTNIG00000017149	-	91	54.701	Tetraodon_nigroviridis
ENSCHOG00000011915	-	59	77.406	ENSTBEG00000004696	-	100	77.406	Tupaia_belangeri
ENSCHOG00000011915	-	100	78.973	ENSTTRG00000010370	MTRF1	92	78.973	Tursiops_truncatus
ENSCHOG00000011915	-	100	78.973	ENSUMAG00000014772	MTRF1	92	78.973	Ursus_maritimus
ENSCHOG00000011915	-	100	78.049	ENSVPAG00000002565	MTRF1	92	78.049	Vicugna_pacos
ENSCHOG00000011915	-	100	78.537	ENSVVUG00000028755	MTRF1	92	78.537	Vulpes_vulpes
ENSCHOG00000011915	-	86	63.714	ENSXETG00000018904	mtrf1	90	63.714	Xenopus_tropicalis
ENSCHOG00000011915	-	86	53.429	ENSXMAG00000009853	mtrf1	79	53.429	Xiphophorus_maculatus