EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000012173 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: 2'-PDE|3635|DKFZp667B1218
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 2241 bases
Position: chrscaffold_108110:3289-5529
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010760	Exo_endo_phos	PF03372.23	3.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000012199	-	1242	-	ENSCHOP00000010760	413 (aa)	-	UPI0001FA07BE

Gene Model

Click here to download ENSCHOG00000012173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000012173's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000012173	-	88	100.000	ENSCHOG00000002188	-	60	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000012173	-	100	92.736	ENSG00000174840	PDE12	68	92.736	Homo_sapiens
ENSCHOG00000012173	-	95	64.736	ENSAPOG00000018806	pde12	65	65.553	Acanthochromis_polyacanthus
ENSCHOG00000012173	-	100	93.462	ENSAMEG00000011802	PDE12	71	91.990	Ailuropoda_melanoleuca
ENSCHOG00000012173	-	100	61.814	ENSACIG00000014918	pde12	65	64.541	Amphilophus_citrinellus
ENSCHOG00000012173	-	93	64.524	ENSAOCG00000016376	pde12	66	64.524	Amphiprion_ocellaris
ENSCHOG00000012173	-	93	64.524	ENSAPEG00000000756	pde12	66	64.524	Amphiprion_percula
ENSCHOG00000012173	-	99	61.205	ENSATEG00000003072	pde12	72	61.205	Anabas_testudineus
ENSCHOG00000012173	-	92	69.767	ENSACAG00000003067	PDE12	66	69.767	Anolis_carolinensis
ENSCHOG00000012173	-	100	92.494	ENSANAG00000011815	PDE12	68	92.252	Aotus_nancymaae
ENSCHOG00000012173	-	99	60.964	ENSACLG00000010127	pde12	66	63.660	Astatotilapia_calliptera
ENSCHOG00000012173	-	100	63.981	ENSAMXG00000020765	pde12	65	67.526	Astyanax_mexicanus
ENSCHOG00000012173	-	100	92.736	ENSBTAG00000015563	PDE12	68	92.978	Bos_taurus
ENSCHOG00000012173	-	77	31.642	WBGene00011268	pde-12	52	31.642	Caenorhabditis_elegans
ENSCHOG00000012173	-	100	92.736	ENSCJAG00000019905	PDE12	68	92.754	Callithrix_jacchus
ENSCHOG00000012173	-	100	93.462	ENSCAFG00000007792	PDE12	67	93.705	Canis_familiaris
ENSCHOG00000012173	-	100	93.462	ENSCAFG00020006692	PDE12	67	93.705	Canis_lupus_dingo
ENSCHOG00000012173	-	100	92.978	ENSCHIG00000014202	PDE12	67	93.220	Capra_hircus
ENSCHOG00000012173	-	100	94.673	ENSTSYG00000025750	PDE12	68	94.673	Carlito_syrichta
ENSCHOG00000012173	-	100	91.041	ENSCPOG00000001620	PDE12	68	91.041	Cavia_porcellus
ENSCHOG00000012173	-	87	99.115	ENSCCAG00000031290	PDE12	64	99.115	Cebus_capucinus
ENSCHOG00000012173	-	100	92.978	ENSCATG00000044539	PDE12	68	92.978	Cercocebus_atys
ENSCHOG00000012173	-	93	89.351	ENSCLAG00000004864	PDE12	68	86.683	Chinchilla_lanigera
ENSCHOG00000012173	-	100	93.462	ENSCSAG00000012275	PDE12	68	93.462	Chlorocebus_sabaeus
ENSCHOG00000012173	-	98	77.641	ENSCPBG00000012353	PDE12	63	80.155	Chrysemys_picta_bellii
ENSCHOG00000012173	-	93	42.643	ENSCING00000006903	-	86	42.643	Ciona_intestinalis
ENSCHOG00000012173	-	59	40.316	ENSCSAVG00000001453	-	99	40.316	Ciona_savignyi
ENSCHOG00000012173	-	100	92.978	ENSCANG00000038723	PDE12	68	92.978	Colobus_angolensis_palliatus
ENSCHOG00000012173	-	100	90.073	ENSCGRG00001021836	Pde12	68	90.073	Cricetulus_griseus_chok1gshd
ENSCHOG00000012173	-	100	90.073	ENSCGRG00000012319	Pde12	68	90.073	Cricetulus_griseus_crigri
ENSCHOG00000012173	-	93	62.274	ENSCSEG00000018538	pde12	69	62.274	Cynoglossus_semilaevis
ENSCHOG00000012173	-	93	50.388	ENSCVAG00000003624	pde12	61	50.518	Cyprinodon_variegatus
ENSCHOG00000012173	-	93	63.472	ENSDARG00000030964	pde12	65	63.472	Danio_rerio
ENSCHOG00000012173	-	100	92.857	ENSDNOG00000048413	PDE12	68	92.857	Dasypus_novemcinctus
ENSCHOG00000012173	-	100	92.029	ENSDORG00000004313	Pde12	68	92.029	Dipodomys_ordii
ENSCHOG00000012173	-	98	36.754	FBgn0051759	CG31759	69	38.303	Drosophila_melanogaster
ENSCHOG00000012173	-	70	54.730	ENSEBUG00000004803	pde12	54	54.362	Eptatretus_burgeri
ENSCHOG00000012173	-	100	94.673	ENSEASG00005000644	PDE12	68	94.915	Equus_asinus_asinus
ENSCHOG00000012173	-	100	94.915	ENSECAG00000005326	PDE12	68	95.157	Equus_caballus
ENSCHOG00000012173	-	100	63.373	ENSELUG00000014391	pde12	68	63.373	Esox_lucius
ENSCHOG00000012173	-	100	92.736	ENSFCAG00000031696	PDE12	68	92.736	Felis_catus
ENSCHOG00000012173	-	93	78.406	ENSFALG00000008401	PDE12	82	78.462	Ficedula_albicollis
ENSCHOG00000012173	-	100	91.283	ENSFDAG00000021278	PDE12	68	92.252	Fukomys_damarensis
ENSCHOG00000012173	-	85	62.500	ENSFHEG00000018967	pde12	57	62.500	Fundulus_heteroclitus
ENSCHOG00000012173	-	93	60.309	ENSGMOG00000018041	pde12	69	60.309	Gadus_morhua
ENSCHOG00000012173	-	94	75.573	ENSGALG00000052355	PDE12	67	75.827	Gallus_gallus
ENSCHOG00000012173	-	98	60.591	ENSGAFG00000002045	pde12	65	62.629	Gambusia_affinis
ENSCHOG00000012173	-	93	62.725	ENSGACG00000003914	pde12	65	62.887	Gasterosteus_aculeatus
ENSCHOG00000012173	-	98	77.641	ENSGAGG00000010266	PDE12	63	80.155	Gopherus_agassizii
ENSCHOG00000012173	-	100	92.736	ENSGGOG00000003312	PDE12	68	92.736	Gorilla_gorilla
ENSCHOG00000012173	-	99	60.964	ENSHBUG00000023370	pde12	65	63.753	Haplochromis_burtoni
ENSCHOG00000012173	-	100	90.315	ENSHGLG00000005661	PDE12	68	91.283	Heterocephalus_glaber_female
ENSCHOG00000012173	-	100	90.315	ENSHGLG00100001136	PDE12	68	91.283	Heterocephalus_glaber_male
ENSCHOG00000012173	-	99	58.057	ENSHCOG00000013749	pde12	69	58.057	Hippocampus_comes
ENSCHOG00000012173	-	100	64.337	ENSIPUG00000007123	Pde12	69	63.855	Ictalurus_punctatus
ENSCHOG00000012173	-	100	93.705	ENSSTOG00000007861	PDE12	68	93.705	Ictidomys_tridecemlineatus
ENSCHOG00000012173	-	100	90.602	ENSJJAG00000006038	Pde12	67	90.602	Jaculus_jaculus
ENSCHOG00000012173	-	99	62.768	ENSKMAG00000018523	pde12	67	66.067	Kryptolebias_marmoratus
ENSCHOG00000012173	-	93	64.781	ENSLBEG00000009762	PDE12	65	64.948	Labrus_bergylta
ENSCHOG00000012173	-	95	63.682	ENSLBEG00000026775	pde12	64	65.963	Labrus_bergylta
ENSCHOG00000012173	-	100	72.048	ENSLACG00000015492	PDE12	68	72.048	Latimeria_chalumnae
ENSCHOG00000012173	-	100	69.157	ENSLOCG00000013277	pde12	66	72.351	Lepisosteus_oculatus
ENSCHOG00000012173	-	100	92.978	ENSLAFG00000002821	PDE12	73	93.220	Loxodonta_africana
ENSCHOG00000012173	-	100	93.220	ENSMFAG00000030966	PDE12	68	93.220	Macaca_fascicularis
ENSCHOG00000012173	-	100	93.220	ENSMMUG00000004052	PDE12	68	93.220	Macaca_mulatta
ENSCHOG00000012173	-	100	93.220	ENSMNEG00000030068	PDE12	68	93.220	Macaca_nemestrina
ENSCHOG00000012173	-	100	93.220	ENSMLEG00000036137	PDE12	68	93.220	Mandrillus_leucophaeus
ENSCHOG00000012173	-	100	62.019	ENSMAMG00000014415	pde12	66	64.524	Mastacembelus_armatus
ENSCHOG00000012173	-	95	59.343	ENSMZEG00005028202	-	69	59.897	Maylandia_zebra
ENSCHOG00000012173	-	99	61.205	ENSMZEG00005016132	pde12	66	63.918	Maylandia_zebra
ENSCHOG00000012173	-	76	78.683	ENSMGAG00000006449	PDE12	99	78.683	Meleagris_gallopavo
ENSCHOG00000012173	-	100	88.942	ENSMAUG00000000442	Pde12	74	88.702	Mesocricetus_auratus
ENSCHOG00000012173	-	100	91.525	ENSMICG00000005723	PDE12	68	91.525	Microcebus_murinus
ENSCHOG00000012173	-	100	89.346	ENSMOCG00000020734	Pde12	68	89.346	Microtus_ochrogaster
ENSCHOG00000012173	-	99	60.482	ENSMMOG00000013636	pde12	69	60.482	Mola_mola
ENSCHOG00000012173	-	100	75.060	ENSMODG00000000155	PDE12	70	75.060	Monodelphis_domestica
ENSCHOG00000012173	-	92	63.117	ENSMALG00000022647	pde12	67	63.117	Monopterus_albus
ENSCHOG00000012173	-	100	89.588	MGP_CAROLIEiJ_G0019032	Pde12	68	89.588	Mus_caroli
ENSCHOG00000012173	-	100	89.104	ENSMUSG00000043702	Pde12	68	89.104	Mus_musculus
ENSCHOG00000012173	-	100	89.346	MGP_PahariEiJ_G0030049	Pde12	68	89.346	Mus_pahari
ENSCHOG00000012173	-	100	89.104	MGP_SPRETEiJ_G0019916	Pde12	68	89.104	Mus_spretus
ENSCHOG00000012173	-	100	92.978	ENSMPUG00000016869	PDE12	68	93.947	Mustela_putorius_furo
ENSCHOG00000012173	-	100	92.736	ENSMLUG00000026487	PDE12	68	92.736	Myotis_lucifugus
ENSCHOG00000012173	-	100	87.651	ENSNGAG00000001228	Pde12	68	87.167	Nannospalax_galili
ENSCHOG00000012173	-	100	92.252	ENSNLEG00000007269	-	68	92.252	Nomascus_leucogenys
ENSCHOG00000012173	-	100	89.688	ENSNLEG00000034833	-	71	89.688	Nomascus_leucogenys
ENSCHOG00000012173	-	92	79.265	ENSMEUG00000006786	PDE12	68	74.458	Notamacropus_eugenii
ENSCHOG00000012173	-	100	89.209	ENSOPRG00000015273	PDE12	68	89.209	Ochotona_princeps
ENSCHOG00000012173	-	100	92.736	ENSODEG00000006268	PDE12	68	92.736	Octodon_degus
ENSCHOG00000012173	-	93	63.918	ENSONIG00000004293	pde12	69	63.918	Oreochromis_niloticus
ENSCHOG00000012173	-	85	81.921	ENSOANG00000012885	PDE12	69	79.737	Ornithorhynchus_anatinus
ENSCHOG00000012173	-	100	91.768	ENSOCUG00000000823	PDE12	68	91.768	Oryctolagus_cuniculus
ENSCHOG00000012173	-	93	63.660	ENSORLG00000017444	pde12	66	63.660	Oryzias_latipes
ENSCHOG00000012173	-	95	62.500	ENSORLG00020010469	pde12	66	63.402	Oryzias_latipes_hni
ENSCHOG00000012173	-	95	62.500	ENSORLG00015004093	pde12	66	63.402	Oryzias_latipes_hsok
ENSCHOG00000012173	-	93	62.113	ENSOMEG00000020900	pde12	66	62.113	Oryzias_melastigma
ENSCHOG00000012173	-	100	92.252	ENSOGAG00000024093	PDE12	68	92.252	Otolemur_garnettii
ENSCHOG00000012173	-	100	93.220	ENSOARG00000013642	PDE12	75	93.462	Ovis_aries
ENSCHOG00000012173	-	100	91.768	ENSPPAG00000034712	PDE12	68	91.768	Pan_paniscus
ENSCHOG00000012173	-	100	92.494	ENSPPRG00000011738	PDE12	68	92.494	Panthera_pardus
ENSCHOG00000012173	-	100	92.494	ENSPTIG00000019166	PDE12	78	92.494	Panthera_tigris_altaica
ENSCHOG00000012173	-	100	92.252	ENSPTRG00000030221	PDE12	68	92.252	Pan_troglodytes
ENSCHOG00000012173	-	100	92.978	ENSPANG00000007324	PDE12	68	92.978	Papio_anubis
ENSCHOG00000012173	-	93	65.375	ENSPKIG00000025354	pde12	67	65.375	Paramormyrops_kingsleyae
ENSCHOG00000012173	-	98	78.378	ENSPSIG00000004926	PDE12	63	80.720	Pelodiscus_sinensis
ENSCHOG00000012173	-	93	60.982	ENSPMGG00000006742	pde12	68	60.982	Periophthalmus_magnuspinnatus
ENSCHOG00000012173	-	100	90.315	ENSPEMG00000007259	Pde12	79	90.315	Peromyscus_maniculatus_bairdii
ENSCHOG00000012173	-	100	62.350	ENSPFOG00000011864	pde12	65	64.781	Poecilia_formosa
ENSCHOG00000012173	-	96	63.910	ENSPLAG00000023871	pde12	73	64.781	Poecilia_latipinna
ENSCHOG00000012173	-	96	63.750	ENSPMEG00000005674	pde12	66	64.948	Poecilia_mexicana
ENSCHOG00000012173	-	93	64.781	ENSPREG00000022831	pde12	66	64.948	Poecilia_reticulata
ENSCHOG00000012173	-	100	93.220	ENSPPYG00000013769	PDE12	68	93.220	Pongo_abelii
ENSCHOG00000012173	-	100	91.525	ENSPCOG00000026004	PDE12	68	91.525	Propithecus_coquereli
ENSCHOG00000012173	-	100	92.494	ENSPVAG00000008885	PDE12	68	92.736	Pteropus_vampyrus
ENSCHOG00000012173	-	99	61.205	ENSPNYG00000013258	pde12	65	64.175	Pundamilia_nyererei
ENSCHOG00000012173	-	93	70.284	ENSPNAG00000029032	pde12	66	70.284	Pygocentrus_nattereri
ENSCHOG00000012173	-	100	90.315	ENSRNOG00000059442	Pde12	68	90.315	Rattus_norvegicus
ENSCHOG00000012173	-	100	92.978	ENSRBIG00000040704	PDE12	68	92.978	Rhinopithecus_bieti
ENSCHOG00000012173	-	100	92.978	ENSRROG00000031279	PDE12	68	92.978	Rhinopithecus_roxellana
ENSCHOG00000012173	-	100	92.736	ENSSBOG00000023974	PDE12	68	92.494	Saimiri_boliviensis_boliviensis
ENSCHOG00000012173	-	81	64.179	ENSSFOG00015003468	pde12	63	64.179	Scleropages_formosus
ENSCHOG00000012173	-	93	63.333	ENSSMAG00000003258	pde12	67	63.333	Scophthalmus_maximus
ENSCHOG00000012173	-	93	64.010	ENSSDUG00000020470	pde12	66	64.010	Seriola_dumerili
ENSCHOG00000012173	-	93	64.781	ENSSLDG00000019833	pde12	67	64.781	Seriola_lalandi_dorsalis
ENSCHOG00000012173	-	100	91.283	ENSSARG00000007201	PDE12	68	91.525	Sorex_araneus
ENSCHOG00000012173	-	93	63.753	ENSSPAG00000014980	pde12	66	63.753	Stegastes_partitus
ENSCHOG00000012173	-	77	83.544	ENSSSCG00000034476	-	74	83.281	Sus_scrofa
ENSCHOG00000012173	-	100	93.220	ENSSSCG00000011465	-	68	93.462	Sus_scrofa
ENSCHOG00000012173	-	89	78.919	ENSTGUG00000007290	PDE12	100	78.919	Taeniopygia_guttata
ENSCHOG00000012173	-	96	62.935	ENSTRUG00000005159	pde12	66	63.660	Takifugu_rubripes
ENSCHOG00000012173	-	99	59.759	ENSTNIG00000017497	pde12	66	62.113	Tetraodon_nigroviridis
ENSCHOG00000012173	-	74	95.395	ENSTBEG00000008202	PDE12	51	95.395	Tupaia_belangeri
ENSCHOG00000012173	-	100	92.736	ENSTTRG00000014707	PDE12	68	92.978	Tursiops_truncatus
ENSCHOG00000012173	-	100	93.705	ENSUAMG00000020634	-	68	93.947	Ursus_americanus
ENSCHOG00000012173	-	64	91.011	ENSUAMG00000008368	-	60	91.386	Ursus_americanus
ENSCHOG00000012173	-	100	93.947	ENSUMAG00000021906	PDE12	94	94.189	Ursus_maritimus
ENSCHOG00000012173	-	100	93.462	ENSVVUG00000020335	PDE12	66	93.705	Vulpes_vulpes
ENSCHOG00000012173	-	93	61.240	ENSXETG00000008653	pde12	70	61.240	Xenopus_tropicalis
ENSCHOG00000012173	-	98	62.808	ENSXCOG00000000407	pde12	68	64.948	Xiphophorus_couchianus
ENSCHOG00000012173	-	98	62.808	ENSXMAG00000013370	pde12	66	64.948	Xiphophorus_maculatus