EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000012404 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 684 bases
Position: chrscaffold_350134:566-1249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000010977	Gar1	PF04410.14	6.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000012431	-	684	-	ENSCHOP00000010977	228 (aa)	-	UPI0001FA0B10

Gene Model

Click here to download ENSCHOG00000012404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000012404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000012404	-	59	98.148	ENSCHOG00000007484	-	59	98.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000012404	-	59	82.963	ENSTSYG00000026632	-	53	89.320	Carlito_syrichta
ENSCHOG00000012404	-	62	61.069	ENSCING00000005744	-	59	58.475	Ciona_intestinalis
ENSCHOG00000012404	-	57	61.240	ENSFCAG00000025841	-	55	61.207	Felis_catus
ENSCHOG00000012404	-	54	83.607	ENSMMOG00000004156	gar1	50	93.204	Mola_mola
ENSCHOG00000012404	-	60	73.723	ENSNLEG00000034282	-	52	81.553	Nomascus_leucogenys
ENSCHOG00000012404	-	89	76.238	ENSPCAG00000015897	GAR1	88	65.686	Procavia_capensis
ENSCHOG00000012404	-	90	77.073	ENSPVAG00000005992	GAR1	76	76.020	Pteropus_vampyrus
ENSCHOG00000012404	-	55	52.756	YHR089C	-	61	47.656	Saccharomyces_cerevisiae
ENSCHOG00000012404	-	60	78.676	ENSSPUG00000008707	GAR1	58	91.262	Sphenodon_punctatus
ENSCHOG00000012404	-	76	84.483	ENSSSCG00000009137	GAR1	51	97.087	Sus_scrofa
ENSCHOG00000012404	-	51	73.333	ENSTGUG00000004185	GAR1	65	89.583	Taeniopygia_guttata
ENSCHOG00000012404	-	79	78.571	ENSTTRG00000016318	GAR1	69	76.111	Tursiops_truncatus