EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000012647 (Gene tree)
Gene ID: -
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 125884 bases
Position: chrGeneScaffold_2850:20950-146833
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011223	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000012712	CHD6-201	7788	-	ENSCHOP00000011223	2595 (aa)	-	UPI0001FA08E0

Gene Model

Click here to download ENSCHOG00000012647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000012647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000012647	CHD6	52	68.978	ENSCHOG00000003782	CHD8	56	68.978

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000012647	CHD6	95	89.789	ENSG00000124177	CHD6	99	95.614	Homo_sapiens
ENSCHOG00000012647	CHD6	95	90.250	ENSAMEG00000009496	CHD6	91	90.250	Ailuropoda_melanoleuca
ENSCHOG00000012647	CHD6	65	73.709	ENSATEG00000005608	chd6	55	74.204	Anabas_testudineus
ENSCHOG00000012647	CHD6	78	78.218	ENSAPLG00000015592	CHD6	90	78.524	Anas_platyrhynchos
ENSCHOG00000012647	CHD6	92	73.564	ENSACAG00000006842	CHD6	88	74.120	Anolis_carolinensis
ENSCHOG00000012647	CHD6	95	89.921	ENSANAG00000037548	CHD6	99	87.156	Aotus_nancymaae
ENSCHOG00000012647	CHD6	62	74.526	ENSAMXG00000009576	chd6	58	74.283	Astyanax_mexicanus
ENSCHOG00000012647	CHD6	95	88.603	ENSBTAG00000005733	CHD6	91	88.603	Bos_taurus
ENSCHOG00000012647	CHD6	95	89.657	ENSCJAG00000017920	CHD6	99	86.972	Callithrix_jacchus
ENSCHOG00000012647	CHD6	95	90.184	ENSCAFG00000009236	CHD6	91	90.184	Canis_familiaris
ENSCHOG00000012647	CHD6	94	88.918	ENSCAFG00020012906	CHD6	99	86.851	Canis_lupus_dingo
ENSCHOG00000012647	CHD6	95	88.538	ENSCHIG00000017606	CHD6	91	88.538	Capra_hircus
ENSCHOG00000012647	CHD6	78	95.648	ENSTSYG00000014635	CHD6	89	95.648	Carlito_syrichta
ENSCHOG00000012647	CHD6	95	89.130	ENSCPOG00000015641	CHD6	91	89.130	Cavia_porcellus
ENSCHOG00000012647	CHD6	95	89.921	ENSCCAG00000036828	CHD6	99	87.156	Cebus_capucinus
ENSCHOG00000012647	CHD6	95	89.460	ENSCATG00000039248	CHD6	99	87.156	Cercocebus_atys
ENSCHOG00000012647	CHD6	95	89.130	ENSCLAG00000013743	CHD6	91	89.130	Chinchilla_lanigera
ENSCHOG00000012647	CHD6	95	89.789	ENSCSAG00000013997	CHD6	91	89.789	Chlorocebus_sabaeus
ENSCHOG00000012647	CHD6	95	79.462	ENSCPBG00000019382	CHD6	91	80.160	Chrysemys_picta_bellii
ENSCHOG00000012647	CHD6	95	89.789	ENSCANG00000043435	CHD6	99	87.156	Colobus_angolensis_palliatus
ENSCHOG00000012647	CHD6	95	88.134	ENSCGRG00001002694	Chd6	91	88.134	Cricetulus_griseus_chok1gshd
ENSCHOG00000012647	CHD6	74	68.267	ENSDARG00000017244	chd6	68	67.675	Danio_rerio
ENSCHOG00000012647	CHD6	95	91.224	ENSDNOG00000004176	CHD6	91	91.224	Dasypus_novemcinctus
ENSCHOG00000012647	CHD6	95	88.852	ENSEASG00005023433	CHD6	95	91.342	Equus_asinus_asinus
ENSCHOG00000012647	CHD6	95	90.231	ENSECAG00000011761	CHD6	92	90.231	Equus_caballus
ENSCHOG00000012647	CHD6	62	76.789	ENSELUG00000012309	chd6	75	76.789	Esox_lucius
ENSCHOG00000012647	CHD6	95	90.053	ENSFCAG00000003572	CHD6	91	90.053	Felis_catus
ENSCHOG00000012647	CHD6	94	77.326	ENSFALG00000012563	CHD6	89	77.064	Ficedula_albicollis
ENSCHOG00000012647	CHD6	95	88.867	ENSFDAG00000013791	CHD6	91	88.867	Fukomys_damarensis
ENSCHOG00000012647	CHD6	57	71.664	ENSGMOG00000011715	chd6	65	71.851	Gadus_morhua
ENSCHOG00000012647	CHD6	69	70.312	ENSGACG00000000037	chd6	65	71.440	Gasterosteus_aculeatus
ENSCHOG00000012647	CHD6	95	89.789	ENSGGOG00000013123	CHD6	99	87.156	Gorilla_gorilla
ENSCHOG00000012647	CHD6	68	73.770	ENSHBUG00000014701	chd6	55	73.705	Haplochromis_burtoni
ENSCHOG00000012647	CHD6	95	89.130	ENSHGLG00000004548	CHD6	91	89.130	Heterocephalus_glaber_female
ENSCHOG00000012647	CHD6	95	89.130	ENSHGLG00100006401	CHD6	91	89.130	Heterocephalus_glaber_male
ENSCHOG00000012647	CHD6	64	76.817	ENSIPUG00000003692	chd6	61	76.817	Ictalurus_punctatus
ENSCHOG00000012647	CHD6	95	89.526	ENSSTOG00000013382	CHD6	91	89.526	Ictidomys_tridecemlineatus
ENSCHOG00000012647	CHD6	79	73.574	ENSLACG00000010881	CHD6	74	73.220	Latimeria_chalumnae
ENSCHOG00000012647	CHD6	65	79.075	ENSLOCG00000007386	chd6	77	69.582	Lepisosteus_oculatus
ENSCHOG00000012647	CHD6	95	90.448	ENSLAFG00000012144	CHD6	91	90.448	Loxodonta_africana
ENSCHOG00000012647	CHD6	95	89.855	ENSMFAG00000032830	CHD6	99	87.156	Macaca_fascicularis
ENSCHOG00000012647	CHD6	95	89.855	ENSMMUG00000020458	CHD6	99	87.156	Macaca_mulatta
ENSCHOG00000012647	CHD6	95	89.855	ENSMNEG00000040847	CHD6	99	87.156	Macaca_nemestrina
ENSCHOG00000012647	CHD6	95	89.342	ENSMLEG00000031965	CHD6	99	87.156	Mandrillus_leucophaeus
ENSCHOG00000012647	CHD6	67	79.592	ENSMAMG00000013111	chd6	55	74.149	Mastacembelus_armatus
ENSCHOG00000012647	CHD6	94	77.734	ENSMGAG00000001121	CHD6	91	78.041	Meleagris_gallopavo
ENSCHOG00000012647	CHD6	95	89.267	ENSMICG00000016641	CHD6	99	86.972	Microcebus_murinus
ENSCHOG00000012647	CHD6	83	90.386	ENSMODG00000000720	-	89	90.386	Monodelphis_domestica
ENSCHOG00000012647	CHD6	95	87.195	MGP_CAROLIEiJ_G0024604	Chd6	100	85.907	Mus_caroli
ENSCHOG00000012647	CHD6	95	87.146	ENSMUSG00000057133	Chd6	100	85.823	Mus_musculus
ENSCHOG00000012647	CHD6	95	87.409	MGP_PahariEiJ_G0026048	Chd6	100	86.245	Mus_pahari
ENSCHOG00000012647	CHD6	95	87.212	MGP_SPRETEiJ_G0025526	Chd6	100	85.907	Mus_spretus
ENSCHOG00000012647	CHD6	95	90.250	ENSMPUG00000017695	CHD6	91	90.250	Mustela_putorius_furo
ENSCHOG00000012647	CHD6	95	90.184	ENSMLUG00000016247	CHD6	91	90.184	Myotis_lucifugus
ENSCHOG00000012647	CHD6	68	73.770	ENSNBRG00000013839	chd6	59	74.116	Neolamprologus_brichardi
ENSCHOG00000012647	CHD6	95	89.013	ENSNLEG00000006496	CHD6	91	89.211	Nomascus_leucogenys
ENSCHOG00000012647	CHD6	95	86.166	ENSOPRG00000013376	-	91	86.166	Ochotona_princeps
ENSCHOG00000012647	CHD6	72	70.538	ENSONIG00000000393	chd6	70	73.770	Oreochromis_niloticus
ENSCHOG00000012647	CHD6	87	81.230	ENSOANG00000014347	CHD6	90	81.295	Ornithorhynchus_anatinus
ENSCHOG00000012647	CHD6	95	89.578	ENSOCUG00000012394	CHD6	92	89.578	Oryctolagus_cuniculus
ENSCHOG00000012647	CHD6	63	72.791	ENSORLG00020021891	chd6	95	81.162	Oryzias_latipes_hni
ENSCHOG00000012647	CHD6	94	89.340	ENSOGAG00000002427	CHD6	91	89.168	Otolemur_garnettii
ENSCHOG00000012647	CHD6	95	85.356	ENSOARG00000002597	CHD6	91	85.356	Ovis_aries
ENSCHOG00000012647	CHD6	95	89.987	ENSPPRG00000014756	CHD6	91	89.987	Panthera_pardus
ENSCHOG00000012647	CHD6	95	90.053	ENSPTIG00000011094	CHD6	91	90.053	Panthera_tigris_altaica
ENSCHOG00000012647	CHD6	95	89.789	ENSPTRG00000013504	CHD6	99	87.156	Pan_troglodytes
ENSCHOG00000012647	CHD6	95	89.855	ENSPANG00000025554	CHD6	99	86.972	Papio_anubis
ENSCHOG00000012647	CHD6	63	77.563	ENSPKIG00000005578	chd6	59	80.357	Paramormyrops_kingsleyae
ENSCHOG00000012647	CHD6	62	73.620	ENSPMGG00000014877	chd6	67	73.620	Periophthalmus_magnuspinnatus
ENSCHOG00000012647	CHD6	95	83.937	ENSPCIG00000028037	CHD6	91	84.560	Phascolarctos_cinereus
ENSCHOG00000012647	CHD6	68	72.131	ENSPLAG00000003128	chd6	51	73.109	Poecilia_latipinna
ENSCHOG00000012647	CHD6	65	72.131	ENSPREG00000022653	chd6	99	82.234	Poecilia_reticulata
ENSCHOG00000012647	CHD6	95	89.789	ENSPPYG00000011016	CHD6	91	89.789	Pongo_abelii
ENSCHOG00000012647	CHD6	95	89.987	ENSPCOG00000001089	CHD6	99	86.972	Propithecus_coquereli
ENSCHOG00000012647	CHD6	68	73.770	ENSPNYG00000022516	chd6	59	75.965	Pundamilia_nyererei
ENSCHOG00000012647	CHD6	68	72.543	ENSPNAG00000012825	chd6	64	72.325	Pygocentrus_nattereri
ENSCHOG00000012647	CHD6	95	85.761	ENSRNOG00000016744	Chd6	91	85.761	Rattus_norvegicus
ENSCHOG00000012647	CHD6	95	89.855	ENSSBOG00000022089	CHD6	99	87.156	Saimiri_boliviensis_boliviensis
ENSCHOG00000012647	CHD6	95	83.608	ENSSHAG00000017072	CHD6	91	83.652	Sarcophilus_harrisii
ENSCHOG00000012647	CHD6	72	71.580	ENSSFOG00015012920	chd6	66	72.130	Scleropages_formosus
ENSCHOG00000012647	CHD6	50	100.000	ENSSARG00000002615	-	50	100.000	Sorex_araneus
ENSCHOG00000012647	CHD6	92	93.493	ENSSSCG00000007360	CHD6	95	89.262	Sus_scrofa
ENSCHOG00000012647	CHD6	85	79.861	ENSTGUG00000003179	CHD6	83	81.562	Taeniopygia_guttata
ENSCHOG00000012647	CHD6	61	74.799	ENSTNIG00000017487	chd6	67	75.862	Tetraodon_nigroviridis
ENSCHOG00000012647	CHD6	95	85.771	ENSTTRG00000013438	CHD6	91	85.771	Tursiops_truncatus
ENSCHOG00000012647	CHD6	94	87.790	ENSUAMG00000024036	CHD6	95	89.768	Ursus_americanus
ENSCHOG00000012647	CHD6	95	90.252	ENSUMAG00000002017	CHD6	95	89.768	Ursus_maritimus
ENSCHOG00000012647	CHD6	89	81.999	ENSVPAG00000007941	CHD6	86	82.067	Vicugna_pacos
ENSCHOG00000012647	CHD6	95	90.250	ENSVVUG00000029164	CHD6	91	90.250	Vulpes_vulpes
ENSCHOG00000012647	CHD6	95	66.426	ENSXETG00000021445	chd6	90	66.645	Xenopus_tropicalis