EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000012716 (Gene tree)
Gene ID: -
Gene Symbol: LARP1
Alias: KIAA0731|LARP|MGC19556
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 42197 bases
Position: chrGeneScaffold_5002:8-42204
Accession: 29531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011269	La	PF05383.17	6.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000012767	LARP1-201	2868	-	ENSCHOP00000011269	956 (aa)	-	UPI0001FA09A8

Gene Model

Click here to download ENSCHOG00000012716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000012716's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000012716	LARP1	68	55.316	ENSCHOG00000005354	LARP1B	74	55.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000012716	LARP1	92	84.311	ENSG00000155506	LARP1	100	91.304	Homo_sapiens
ENSCHOG00000012716	LARP1	78	68.282	ENSAPOG00000020685	larp1	80	68.282	Acanthochromis_polyacanthus
ENSCHOG00000012716	LARP1	89	92.857	ENSAMEG00000016673	LARP1	92	92.857	Ailuropoda_melanoleuca
ENSCHOG00000012716	LARP1	85	67.057	ENSACIG00000012994	larp1	78	67.057	Amphilophus_citrinellus
ENSCHOG00000012716	LARP1	66	65.893	ENSAOCG00000007792	larp1	81	65.106	Amphiprion_ocellaris
ENSCHOG00000012716	LARP1	89	67.169	ENSAPEG00000022246	larp1	83	66.373	Amphiprion_percula
ENSCHOG00000012716	LARP1	89	67.927	ENSATEG00000013523	larp1	81	67.718	Anabas_testudineus
ENSCHOG00000012716	LARP1	82	78.548	ENSAPLG00000007559	LARP1	91	78.548	Anas_platyrhynchos
ENSCHOG00000012716	LARP1	88	74.530	ENSACAG00000004071	LARP1	91	74.530	Anolis_carolinensis
ENSCHOG00000012716	LARP1	89	94.000	ENSANAG00000029949	LARP1	92	93.814	Aotus_nancymaae
ENSCHOG00000012716	LARP1	91	64.589	ENSACLG00000015256	larp1	91	64.589	Astatotilapia_calliptera
ENSCHOG00000012716	LARP1	88	67.901	ENSAMXG00000000859	larp1	81	67.901	Astyanax_mexicanus
ENSCHOG00000012716	LARP1	92	93.778	ENSBTAG00000008443	LARP1	83	93.421	Bos_taurus
ENSCHOG00000012716	LARP1	92	94.222	ENSCJAG00000004454	LARP1	83	93.421	Callithrix_jacchus
ENSCHOG00000012716	LARP1	88	94.845	ENSCAFG00000017639	LARP1	92	94.845	Canis_familiaris
ENSCHOG00000012716	LARP1	82	93.284	ENSCAFG00020023860	LARP1	91	93.284	Canis_lupus_dingo
ENSCHOG00000012716	LARP1	92	93.333	ENSCHIG00000014414	LARP1	84	93.274	Capra_hircus
ENSCHOG00000012716	LARP1	88	90.722	ENSTSYG00000013732	LARP1	95	84.604	Carlito_syrichta
ENSCHOG00000012716	LARP1	76	88.811	ENSCAPG00000013865	LARP1	79	87.662	Cavia_aperea
ENSCHOG00000012716	LARP1	88	89.637	ENSCPOG00000003377	LARP1	92	89.637	Cavia_porcellus
ENSCHOG00000012716	LARP1	92	94.222	ENSCCAG00000025201	LARP1	83	93.860	Cebus_capucinus
ENSCHOG00000012716	LARP1	92	87.013	ENSCATG00000030675	LARP1	89	84.457	Cercocebus_atys
ENSCHOG00000012716	LARP1	88	90.722	ENSCLAG00000012755	LARP1	93	90.476	Chinchilla_lanigera
ENSCHOG00000012716	LARP1	82	84.604	ENSCSAG00000010800	LARP1	95	84.604	Chlorocebus_sabaeus
ENSCHOG00000012716	LARP1	91	75.882	ENSCPBG00000002173	LARP1	85	75.988	Chrysemys_picta_bellii
ENSCHOG00000012716	LARP1	92	84.604	ENSCANG00000037418	LARP1	89	84.604	Colobus_angolensis_palliatus
ENSCHOG00000012716	LARP1	92	88.210	ENSCGRG00001016913	Larp1	85	88.210	Cricetulus_griseus_chok1gshd
ENSCHOG00000012716	LARP1	83	88.304	ENSCGRG00000009916	Larp1	91	83.784	Cricetulus_griseus_crigri
ENSCHOG00000012716	LARP1	89	65.739	ENSCSEG00000016431	larp1	84	65.043	Cynoglossus_semilaevis
ENSCHOG00000012716	LARP1	91	65.857	ENSCVAG00000022687	larp1	84	65.857	Cyprinodon_variegatus
ENSCHOG00000012716	LARP1	92	63.328	ENSDARG00000101722	larp1	89	63.328	Danio_rerio
ENSCHOG00000012716	LARP1	92	89.565	ENSDNOG00000012073	LARP1	83	86.070	Dasypus_novemcinctus
ENSCHOG00000012716	LARP1	88	84.018	ENSDORG00000002897	Larp1	94	84.604	Dipodomys_ordii
ENSCHOG00000012716	LARP1	81	92.553	ENSETEG00000020251	LARP1	92	92.553	Echinops_telfairi
ENSCHOG00000012716	LARP1	92	93.392	ENSEASG00005001070	LARP1	84	92.265	Equus_asinus_asinus
ENSCHOG00000012716	LARP1	92	93.392	ENSECAG00000017002	LARP1	66	93.043	Equus_caballus
ENSCHOG00000012716	LARP1	85	87.805	ENSEEUG00000001065	LARP1	91	88.889	Erinaceus_europaeus
ENSCHOG00000012716	LARP1	91	62.751	ENSELUG00000019403	larp1	83	63.897	Esox_lucius
ENSCHOG00000012716	LARP1	92	94.714	ENSFCAG00000000592	LARP1	86	94.022	Felis_catus
ENSCHOG00000012716	LARP1	68	76.574	ENSFALG00000008335	LARP1	82	76.574	Ficedula_albicollis
ENSCHOG00000012716	LARP1	88	90.625	ENSFDAG00000021125	LARP1	92	90.625	Fukomys_damarensis
ENSCHOG00000012716	LARP1	53	61.149	ENSFHEG00000020307	larp1	75	59.441	Fundulus_heteroclitus
ENSCHOG00000012716	LARP1	91	76.696	ENSGALG00000040109	LARP1	89	74.487	Gallus_gallus
ENSCHOG00000012716	LARP1	91	75.294	ENSGAGG00000025113	LARP1	89	75.403	Gopherus_agassizii
ENSCHOG00000012716	LARP1	92	84.311	ENSGGOG00000006048	LARP1	90	84.311	Gorilla_gorilla
ENSCHOG00000012716	LARP1	91	65.242	ENSHBUG00000020762	larp1	91	65.242	Haplochromis_burtoni
ENSCHOG00000012716	LARP1	92	84.897	ENSHGLG00000006267	LARP1	84	84.897	Heterocephalus_glaber_female
ENSCHOG00000012716	LARP1	88	90.674	ENSHGLG00100014230	-	92	90.674	Heterocephalus_glaber_male
ENSCHOG00000012716	LARP1	90	75.635	ENSHGLG00100003395	-	87	75.893	Heterocephalus_glaber_male
ENSCHOG00000012716	LARP1	83	67.780	ENSHCOG00000010786	larp1	83	67.780	Hippocampus_comes
ENSCHOG00000012716	LARP1	89	64.865	ENSIPUG00000019105	Larp1	87	64.865	Ictalurus_punctatus
ENSCHOG00000012716	LARP1	88	86.070	ENSSTOG00000005678	LARP1	95	86.070	Ictidomys_tridecemlineatus
ENSCHOG00000012716	LARP1	92	92.174	ENSJJAG00000016950	Larp1	86	92.174	Jaculus_jaculus
ENSCHOG00000012716	LARP1	88	66.372	ENSKMAG00000018468	larp1	89	66.471	Kryptolebias_marmoratus
ENSCHOG00000012716	LARP1	91	65.932	ENSLBEG00000027172	larp1	83	65.932	Labrus_bergylta
ENSCHOG00000012716	LARP1	85	72.375	ENSLOCG00000012457	larp1	86	72.375	Lepisosteus_oculatus
ENSCHOG00000012716	LARP1	92	93.392	ENSLAFG00000008991	LARP1	85	93.478	Loxodonta_africana
ENSCHOG00000012716	LARP1	92	84.457	ENSMFAG00000031651	LARP1	89	84.457	Macaca_fascicularis
ENSCHOG00000012716	LARP1	88	86.869	ENSMMUG00000009411	LARP1	95	86.869	Macaca_mulatta
ENSCHOG00000012716	LARP1	82	93.182	ENSMNEG00000039294	LARP1	91	93.182	Macaca_nemestrina
ENSCHOG00000012716	LARP1	92	84.457	ENSMLEG00000035142	LARP1	89	84.457	Mandrillus_leucophaeus
ENSCHOG00000012716	LARP1	91	67.201	ENSMAMG00000021788	larp1	84	66.284	Mastacembelus_armatus
ENSCHOG00000012716	LARP1	91	64.589	ENSMZEG00005009345	larp1	91	64.589	Maylandia_zebra
ENSCHOG00000012716	LARP1	88	75.217	ENSMGAG00000005696	LARP1	91	75.217	Meleagris_gallopavo
ENSCHOG00000012716	LARP1	92	87.773	ENSMAUG00000001385	Larp1	85	87.773	Mesocricetus_auratus
ENSCHOG00000012716	LARP1	89	92.500	ENSMICG00000000837	LARP1	92	91.837	Microcebus_murinus
ENSCHOG00000012716	LARP1	92	88.646	ENSMOCG00000008920	Larp1	85	88.646	Microtus_ochrogaster
ENSCHOG00000012716	LARP1	76	59.638	ENSMMOG00000013364	larp1	73	59.638	Mola_mola
ENSCHOG00000012716	LARP1	89	77.339	ENSMODG00000008663	LARP1	91	77.339	Monodelphis_domestica
ENSCHOG00000012716	LARP1	91	65.429	ENSMALG00000017180	larp1	86	65.429	Monopterus_albus
ENSCHOG00000012716	LARP1	92	88.210	MGP_CAROLIEiJ_G0016383	Larp1	85	88.210	Mus_caroli
ENSCHOG00000012716	LARP1	92	87.773	ENSMUSG00000037331	Larp1	85	87.773	Mus_musculus
ENSCHOG00000012716	LARP1	92	88.261	MGP_PahariEiJ_G0017518	Larp1	85	88.696	Mus_pahari
ENSCHOG00000012716	LARP1	92	88.210	MGP_SPRETEiJ_G0017225	Larp1	85	88.210	Mus_spretus
ENSCHOG00000012716	LARP1	73	93.392	ENSMPUG00000013564	LARP1	79	93.043	Mustela_putorius_furo
ENSCHOG00000012716	LARP1	88	93.878	ENSMLUG00000002608	LARP1	92	93.878	Myotis_lucifugus
ENSCHOG00000012716	LARP1	88	83.431	ENSNGAG00000001098	Larp1	95	84.018	Nannospalax_galili
ENSCHOG00000012716	LARP1	88	65.152	ENSNBRG00000008963	larp1	87	65.152	Neolamprologus_brichardi
ENSCHOG00000012716	LARP1	93	84.164	ENSNLEG00000016588	LARP1	95	84.164	Nomascus_leucogenys
ENSCHOG00000012716	LARP1	87	71.765	ENSMEUG00000002957	LARP1	91	71.765	Notamacropus_eugenii
ENSCHOG00000012716	LARP1	88	91.192	ENSOPRG00000013014	LARP1	92	91.192	Ochotona_princeps
ENSCHOG00000012716	LARP1	88	89.637	ENSODEG00000010824	LARP1	92	89.637	Octodon_degus
ENSCHOG00000012716	LARP1	90	65.939	ENSONIG00000017308	larp1	84	66.038	Oreochromis_niloticus
ENSCHOG00000012716	LARP1	90	75.434	ENSOANG00000005096	LARP1	91	76.385	Ornithorhynchus_anatinus
ENSCHOG00000012716	LARP1	92	92.511	ENSOCUG00000013066	LARP1	84	92.609	Oryctolagus_cuniculus
ENSCHOG00000012716	LARP1	88	65.230	ENSORLG00000000824	larp1	81	66.265	Oryzias_latipes
ENSCHOG00000012716	LARP1	88	65.230	ENSORLG00020022241	larp1	82	66.265	Oryzias_latipes_hni
ENSCHOG00000012716	LARP1	88	65.082	ENSORLG00015007538	larp1	82	66.114	Oryzias_latipes_hsok
ENSCHOG00000012716	LARP1	89	66.265	ENSOMEG00000003134	larp1	82	66.265	Oryzias_melastigma
ENSCHOG00000012716	LARP1	88	92.228	ENSOGAG00000016750	LARP1	92	92.228	Otolemur_garnettii
ENSCHOG00000012716	LARP1	89	92.784	ENSOARG00000009893	LARP1	92	92.708	Ovis_aries
ENSCHOG00000012716	LARP1	92	84.311	ENSPPAG00000042993	LARP1	89	84.311	Pan_paniscus
ENSCHOG00000012716	LARP1	90	90.278	ENSPPRG00000009780	LARP1	88	90.000	Panthera_pardus
ENSCHOG00000012716	LARP1	90	90.000	ENSPTIG00000007013	LARP1	88	90.000	Panthera_tigris_altaica
ENSCHOG00000012716	LARP1	92	87.446	ENSPTRG00000017447	LARP1	86	87.554	Pan_troglodytes
ENSCHOG00000012716	LARP1	92	87.013	ENSPANG00000008080	LARP1	89	84.457	Papio_anubis
ENSCHOG00000012716	LARP1	86	69.545	ENSPKIG00000010096	larp1	83	66.376	Paramormyrops_kingsleyae
ENSCHOG00000012716	LARP1	83	66.667	ENSPKIG00000017153	-	76	68.182	Paramormyrops_kingsleyae
ENSCHOG00000012716	LARP1	85	67.093	ENSPMGG00000011599	larp1	85	67.255	Periophthalmus_magnuspinnatus
ENSCHOG00000012716	LARP1	88	84.604	ENSPEMG00000022523	Larp1	95	84.604	Peromyscus_maniculatus_bairdii
ENSCHOG00000012716	LARP1	98	71.649	ENSPCIG00000019242	LARP1	76	77.463	Phascolarctos_cinereus
ENSCHOG00000012716	LARP1	88	65.288	ENSPFOG00000005836	larp1	83	65.447	Poecilia_formosa
ENSCHOG00000012716	LARP1	88	65.436	ENSPLAG00000008936	larp1	83	65.593	Poecilia_latipinna
ENSCHOG00000012716	LARP1	88	66.018	ENSPMEG00000013656	larp1	83	65.300	Poecilia_mexicana
ENSCHOG00000012716	LARP1	85	64.993	ENSPREG00000005726	larp1	89	65.154	Poecilia_reticulata
ENSCHOG00000012716	LARP1	88	90.674	ENSPCAG00000006407	LARP1	92	90.674	Procavia_capensis
ENSCHOG00000012716	LARP1	88	92.746	ENSPCOG00000016949	LARP1	91	92.746	Propithecus_coquereli
ENSCHOG00000012716	LARP1	92	93.421	ENSPVAG00000002262	LARP1	83	90.909	Pteropus_vampyrus
ENSCHOG00000012716	LARP1	90	64.589	ENSPNYG00000007938	larp1	91	64.589	Pundamilia_nyererei
ENSCHOG00000012716	LARP1	87	68.429	ENSPNAG00000021427	larp1	82	68.429	Pygocentrus_nattereri
ENSCHOG00000012716	LARP1	88	84.604	ENSRNOG00000031544	Larp1	95	84.604	Rattus_norvegicus
ENSCHOG00000012716	LARP1	92	84.457	ENSRBIG00000038005	LARP1	89	84.457	Rhinopithecus_bieti
ENSCHOG00000012716	LARP1	92	84.604	ENSRROG00000034073	LARP1	91	92.424	Rhinopithecus_roxellana
ENSCHOG00000012716	LARP1	92	84.751	ENSSBOG00000019816	LARP1	96	87.000	Saimiri_boliviensis_boliviensis
ENSCHOG00000012716	LARP1	96	71.789	ENSSHAG00000011115	LARP1	92	78.267	Sarcophilus_harrisii
ENSCHOG00000012716	LARP1	90	67.356	ENSSFOG00015018058	-	82	67.356	Scleropages_formosus
ENSCHOG00000012716	LARP1	85	65.312	ENSSFOG00015020304	larp1	86	65.312	Scleropages_formosus
ENSCHOG00000012716	LARP1	85	66.559	ENSSMAG00000007468	larp1	81	66.559	Scophthalmus_maximus
ENSCHOG00000012716	LARP1	91	65.390	ENSSDUG00000000268	larp1	83	65.120	Seriola_dumerili
ENSCHOG00000012716	LARP1	68	67.057	ENSSLDG00000016505	larp1	80	67.057	Seriola_lalandi_dorsalis
ENSCHOG00000012716	LARP1	60	84.906	ENSSARG00000013907	-	87	85.849	Sorex_araneus
ENSCHOG00000012716	LARP1	91	75.988	ENSSPUG00000012179	-	80	75.988	Sphenodon_punctatus
ENSCHOG00000012716	LARP1	91	64.731	ENSSPAG00000003910	larp1	83	64.747	Stegastes_partitus
ENSCHOG00000012716	LARP1	92	93.421	ENSSSCG00000017069	LARP1	91	90.370	Sus_scrofa
ENSCHOG00000012716	LARP1	85	77.335	ENSTGUG00000000704	LARP1	92	77.335	Taeniopygia_guttata
ENSCHOG00000012716	LARP1	91	64.234	ENSTRUG00000009470	larp1	83	64.192	Takifugu_rubripes
ENSCHOG00000012716	LARP1	82	92.228	ENSTBEG00000003381	LARP1	92	92.228	Tupaia_belangeri
ENSCHOG00000012716	LARP1	87	92.778	ENSTTRG00000015934	LARP1	92	92.228	Tursiops_truncatus
ENSCHOG00000012716	LARP1	92	95.154	ENSUAMG00000019334	LARP1	83	94.783	Ursus_americanus
ENSCHOG00000012716	LARP1	87	94.022	ENSUMAG00000002934	LARP1	92	94.022	Ursus_maritimus
ENSCHOG00000012716	LARP1	82	93.284	ENSVVUG00000004644	LARP1	91	93.284	Vulpes_vulpes
ENSCHOG00000012716	LARP1	88	73.476	ENSXETG00000008413	larp1	84	73.628	Xenopus_tropicalis
ENSCHOG00000012716	LARP1	75	65.224	ENSXCOG00000004022	larp1	79	65.224	Xiphophorus_couchianus
ENSCHOG00000012716	LARP1	88	65.140	ENSXMAG00000018780	larp1	83	65.154	Xiphophorus_maculatus