EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000012747 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 4579 bases
Position: chrGeneScaffold_6842:26606-31184
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011280	RRM_5	PF13893.6	1.1e-08	1	1
ENSCHOP00000011280	RRM_1	PF00076.22	7.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000012778	-	444	-	ENSCHOP00000011280	148 (aa)	-	UPI0001FA0A09

Gene Model

Click here to download ENSCHOG00000012747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000012747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000012747	-	57	31.765	ENSCHOG00000004836	-	59	31.765
ENSCHOG00000012747	-	57	31.765	ENSCHOG00000007773	-	52	31.765
ENSCHOG00000012747	-	52	35.897	ENSCHOG00000005967	-	50	35.897

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000012747	-	100	93.919	ENSG00000076053	RBM7	99	93.919	Homo_sapiens
ENSCHOG00000012747	-	53	70.886	ENSAPOG00000012768	rbm7	53	54.225	Acanthochromis_polyacanthus
ENSCHOG00000012747	-	100	94.595	ENSAMEG00000013276	-	56	90.541	Ailuropoda_melanoleuca
ENSCHOG00000012747	-	55	69.136	ENSACIG00000021769	-	87	69.136	Amphilophus_citrinellus
ENSCHOG00000012747	-	96	55.862	ENSAOCG00000004178	rbm7	52	53.521	Amphiprion_ocellaris
ENSCHOG00000012747	-	96	55.862	ENSAPEG00000021981	rbm7	52	53.521	Amphiprion_percula
ENSCHOG00000012747	-	55	74.074	ENSATEG00000000596	-	86	74.074	Anabas_testudineus
ENSCHOG00000012747	-	79	65.000	ENSAPLG00000005180	-	53	65.000	Anas_platyrhynchos
ENSCHOG00000012747	-	100	60.625	ENSACAG00000011589	-	58	63.750	Anolis_carolinensis
ENSCHOG00000012747	-	100	93.919	ENSANAG00000031879	-	94	93.919	Aotus_nancymaae
ENSCHOG00000012747	-	100	92.568	ENSANAG00000031340	-	94	92.568	Aotus_nancymaae
ENSCHOG00000012747	-	96	56.463	ENSACLG00000001203	rbm7	52	54.225	Astatotilapia_calliptera
ENSCHOG00000012747	-	70	43.689	ENSAMXG00000032439	rbm11	51	42.991	Astyanax_mexicanus
ENSCHOG00000012747	-	97	64.238	ENSAMXG00000037251	rbm7	56	60.897	Astyanax_mexicanus
ENSCHOG00000012747	-	100	91.892	ENSBTAG00000008219	RBM7	55	91.892	Bos_taurus
ENSCHOG00000012747	-	100	93.243	ENSCJAG00000011949	-	97	93.243	Callithrix_jacchus
ENSCHOG00000012747	-	100	89.189	ENSCAFG00000013514	-	56	88.514	Canis_familiaris
ENSCHOG00000012747	-	100	89.865	ENSCAFG00020002518	-	95	89.189	Canis_lupus_dingo
ENSCHOG00000012747	-	100	91.892	ENSCHIG00000010879	-	55	91.892	Capra_hircus
ENSCHOG00000012747	-	100	91.892	ENSCHIG00000008632	-	55	91.892	Capra_hircus
ENSCHOG00000012747	-	100	93.919	ENSTSYG00000013731	-	55	93.919	Carlito_syrichta
ENSCHOG00000012747	-	82	89.344	ENSCPOG00000034273	-	50	89.344	Cavia_porcellus
ENSCHOG00000012747	-	100	93.919	ENSCCAG00000036534	-	56	93.919	Cebus_capucinus
ENSCHOG00000012747	-	100	93.243	ENSCATG00000037361	-	66	88.514	Cercocebus_atys
ENSCHOG00000012747	-	100	89.865	ENSCLAG00000014875	-	54	89.189	Chinchilla_lanigera
ENSCHOG00000012747	-	100	94.595	ENSCSAG00000002756	-	55	94.595	Chlorocebus_sabaeus
ENSCHOG00000012747	-	100	72.611	ENSCPBG00000009366	-	84	72.611	Chrysemys_picta_bellii
ENSCHOG00000012747	-	100	93.919	ENSCANG00000031398	-	66	89.189	Colobus_angolensis_palliatus
ENSCHOG00000012747	-	100	89.865	ENSCGRG00001019236	Rbm7	55	89.865	Cricetulus_griseus_chok1gshd
ENSCHOG00000012747	-	100	89.865	ENSCGRG00000005045	Rbm7	55	89.865	Cricetulus_griseus_crigri
ENSCHOG00000012747	-	96	54.795	ENSCVAG00000023415	rbm7	53	54.483	Cyprinodon_variegatus
ENSCHOG00000012747	-	81	41.667	ENSDARG00000090202	rbm11	55	52.809	Danio_rerio
ENSCHOG00000012747	-	97	60.811	ENSDARG00000020841	rbm7	57	58.108	Danio_rerio
ENSCHOG00000012747	-	100	97.973	ENSDNOG00000018423	-	55	97.973	Dasypus_novemcinctus
ENSCHOG00000012747	-	62	64.130	ENSDORG00000000801	Rbm11	64	64.130	Dipodomys_ordii
ENSCHOG00000012747	-	100	93.919	ENSDORG00000029149	Rbm7	55	88.514	Dipodomys_ordii
ENSCHOG00000012747	-	100	87.162	ENSETEG00000015869	-	55	87.162	Echinops_telfairi
ENSCHOG00000012747	-	64	66.316	ENSEBUG00000009746	rbm7	61	66.316	Eptatretus_burgeri
ENSCHOG00000012747	-	100	94.595	ENSEASG00005006676	-	55	90.541	Equus_asinus_asinus
ENSCHOG00000012747	-	100	95.946	ENSECAG00000004636	-	55	95.946	Equus_caballus
ENSCHOG00000012747	-	100	89.189	ENSEEUG00000015854	-	56	89.189	Erinaceus_europaeus
ENSCHOG00000012747	-	99	61.039	ENSELUG00000017868	rbm7	57	58.974	Esox_lucius
ENSCHOG00000012747	-	100	91.892	ENSFCAG00000040484	-	54	91.892	Felis_catus
ENSCHOG00000012747	-	100	87.838	ENSFDAG00000010616	-	54	83.108	Fukomys_damarensis
ENSCHOG00000012747	-	55	69.136	ENSFHEG00000000845	-	90	69.136	Fundulus_heteroclitus
ENSCHOG00000012747	-	96	50.685	ENSGMOG00000013362	rbm7	51	49.296	Gadus_morhua
ENSCHOG00000012747	-	99	67.114	ENSGALG00000007017	RBM7	53	65.772	Gallus_gallus
ENSCHOG00000012747	-	93	55.634	ENSGAFG00000000870	rbm7	52	53.103	Gambusia_affinis
ENSCHOG00000012747	-	96	57.143	ENSGACG00000006628	rbm7	54	55.782	Gasterosteus_aculeatus
ENSCHOG00000012747	-	100	72.611	ENSGAGG00000021127	-	52	72.611	Gopherus_agassizii
ENSCHOG00000012747	-	100	89.865	ENSGGOG00000009941	-	64	98.837	Gorilla_gorilla
ENSCHOG00000012747	-	96	55.782	ENSHBUG00000004319	rbm7	52	53.521	Haplochromis_burtoni
ENSCHOG00000012747	-	93	88.321	ENSHGLG00000016655	-	52	87.591	Heterocephalus_glaber_female
ENSCHOG00000012747	-	56	92.771	ENSHGLG00000003564	-	73	92.771	Heterocephalus_glaber_female
ENSCHOG00000012747	-	100	71.622	ENSHGLG00000013918	-	97	68.919	Heterocephalus_glaber_female
ENSCHOG00000012747	-	100	91.216	ENSHGLG00000018700	RBM7	55	90.541	Heterocephalus_glaber_female
ENSCHOG00000012747	-	98	84.828	ENSHGLG00000014428	-	70	85.366	Heterocephalus_glaber_female
ENSCHOG00000012747	-	98	84.828	ENSHGLG00100011703	-	70	85.366	Heterocephalus_glaber_male
ENSCHOG00000012747	-	93	88.321	ENSHGLG00100009317	-	52	87.591	Heterocephalus_glaber_male
ENSCHOG00000012747	-	59	73.563	ENSHGLG00100008973	-	73	73.563	Heterocephalus_glaber_male
ENSCHOG00000012747	-	100	90.541	ENSHGLG00100005358	-	55	89.865	Heterocephalus_glaber_male
ENSCHOG00000012747	-	82	83.471	ENSHGLG00100005739	-	54	83.471	Heterocephalus_glaber_male
ENSCHOG00000012747	-	100	71.622	ENSHGLG00100015249	-	97	68.919	Heterocephalus_glaber_male
ENSCHOG00000012747	-	56	92.771	ENSHGLG00100001021	-	73	92.771	Heterocephalus_glaber_male
ENSCHOG00000012747	-	55	71.605	ENSHCOG00000010866	-	85	71.605	Hippocampus_comes
ENSCHOG00000012747	-	97	59.333	ENSIPUG00000009397	rbm7	57	59.459	Ictalurus_punctatus
ENSCHOG00000012747	-	59	51.724	ENSIPUG00000018209	rbm11	93	51.724	Ictalurus_punctatus
ENSCHOG00000012747	-	100	80.405	ENSSTOG00000012459	-	52	79.730	Ictidomys_tridecemlineatus
ENSCHOG00000012747	-	93	84.783	ENSSTOG00000031973	-	62	84.058	Ictidomys_tridecemlineatus
ENSCHOG00000012747	-	100	90.541	ENSJJAG00000011823	-	55	90.541	Jaculus_jaculus
ENSCHOG00000012747	-	99	74.830	ENSJJAG00000016540	-	50	71.429	Jaculus_jaculus
ENSCHOG00000012747	-	96	53.425	ENSLBEG00000024902	rbm7	52	53.521	Labrus_bergylta
ENSCHOG00000012747	-	99	66.443	ENSLACG00000018620	-	53	66.443	Latimeria_chalumnae
ENSCHOG00000012747	-	99	60.526	ENSLOCG00000002408	rbm7	57	61.842	Lepisosteus_oculatus
ENSCHOG00000012747	-	100	88.000	ENSLAFG00000012444	-	55	85.235	Loxodonta_africana
ENSCHOG00000012747	-	100	94.595	ENSMFAG00000000965	-	66	89.865	Macaca_fascicularis
ENSCHOG00000012747	-	100	94.595	ENSMMUG00000012270	RBM7	67	94.595	Macaca_mulatta
ENSCHOG00000012747	-	100	93.919	ENSMNEG00000005397	-	66	89.189	Macaca_nemestrina
ENSCHOG00000012747	-	100	93.243	ENSMLEG00000041953	-	66	88.514	Mandrillus_leucophaeus
ENSCHOG00000012747	-	97	56.376	ENSMAMG00000014145	rbm7	54	56.250	Mastacembelus_armatus
ENSCHOG00000012747	-	96	56.463	ENSMZEG00005013295	rbm7	52	54.225	Maylandia_zebra
ENSCHOG00000012747	-	99	69.128	ENSMGAG00000003004	-	53	67.785	Meleagris_gallopavo
ENSCHOG00000012747	-	98	89.655	ENSMAUG00000017938	-	92	89.655	Mesocricetus_auratus
ENSCHOG00000012747	-	100	87.162	ENSMAUG00000001942	-	55	87.162	Mesocricetus_auratus
ENSCHOG00000012747	-	100	96.622	ENSMICG00000042981	-	53	96.622	Microcebus_murinus
ENSCHOG00000012747	-	100	89.865	ENSMOCG00000009674	Rbm7	55	89.865	Microtus_ochrogaster
ENSCHOG00000012747	-	87	50.000	ENSMMOG00000004967	rbm7	68	59.155	Mola_mola
ENSCHOG00000012747	-	100	78.846	ENSMODG00000013918	-	56	77.564	Monodelphis_domestica
ENSCHOG00000012747	-	96	51.370	ENSMALG00000010901	rbm7	50	51.408	Monopterus_albus
ENSCHOG00000012747	-	100	89.189	MGP_CAROLIEiJ_G0032167	Rbm7	55	89.189	Mus_caroli
ENSCHOG00000012747	-	100	88.514	ENSMUSG00000042396	Rbm7	92	88.514	Mus_musculus
ENSCHOG00000012747	-	100	89.189	MGP_PahariEiJ_G0015035	Rbm7	55	89.189	Mus_pahari
ENSCHOG00000012747	-	100	88.514	MGP_SPRETEiJ_G0033306	Rbm7	55	88.514	Mus_spretus
ENSCHOG00000012747	-	100	89.865	ENSMPUG00000003941	-	56	89.189	Mustela_putorius_furo
ENSCHOG00000012747	-	98	92.414	ENSMLUG00000023234	-	55	92.414	Myotis_lucifugus
ENSCHOG00000012747	-	100	89.865	ENSNGAG00000006244	-	55	89.865	Nannospalax_galili
ENSCHOG00000012747	-	96	55.782	ENSNBRG00000017104	rbm7	52	53.521	Neolamprologus_brichardi
ENSCHOG00000012747	-	100	94.595	ENSNLEG00000029494	-	69	94.595	Nomascus_leucogenys
ENSCHOG00000012747	-	100	62.838	ENSMEUG00000006187	-	55	62.838	Notamacropus_eugenii
ENSCHOG00000012747	-	100	90.541	ENSOPRG00000011060	-	55	90.541	Ochotona_princeps
ENSCHOG00000012747	-	100	79.054	ENSODEG00000016844	-	65	79.054	Octodon_degus
ENSCHOG00000012747	-	100	65.541	ENSODEG00000000186	-	51	64.865	Octodon_degus
ENSCHOG00000012747	-	100	93.243	ENSODEG00000010164	-	99	93.243	Octodon_degus
ENSCHOG00000012747	-	96	55.034	ENSONIG00000005369	rbm7	52	53.741	Oreochromis_niloticus
ENSCHOG00000012747	-	100	75.325	ENSOANG00000001755	-	52	75.325	Ornithorhynchus_anatinus
ENSCHOG00000012747	-	100	94.595	ENSOCUG00000003342	-	55	94.595	Oryctolagus_cuniculus
ENSCHOG00000012747	-	96	56.849	ENSORLG00000028880	rbm7	53	54.110	Oryzias_latipes
ENSCHOG00000012747	-	96	56.164	ENSORLG00020010841	rbm7	52	53.425	Oryzias_latipes_hni
ENSCHOG00000012747	-	96	56.849	ENSORLG00015000536	rbm7	52	54.110	Oryzias_latipes_hsok
ENSCHOG00000012747	-	100	95.946	ENSOGAG00000016857	-	55	95.946	Otolemur_garnettii
ENSCHOG00000012747	-	100	92.568	ENSOARG00000000924	-	54	92.568	Ovis_aries
ENSCHOG00000012747	-	100	93.919	ENSPPAG00000027572	-	66	89.189	Pan_paniscus
ENSCHOG00000012747	-	100	90.541	ENSPPRG00000004372	-	55	89.865	Panthera_pardus
ENSCHOG00000012747	-	100	90.541	ENSPTIG00000013512	-	55	89.865	Panthera_tigris_altaica
ENSCHOG00000012747	-	93	80.292	ENSPTRG00000049329	-	50	79.562	Pan_troglodytes
ENSCHOG00000012747	-	100	93.919	ENSPTRG00000004305	RBM7	66	89.189	Pan_troglodytes
ENSCHOG00000012747	-	100	93.919	ENSPANG00000009431	-	66	89.189	Papio_anubis
ENSCHOG00000012747	-	97	65.563	ENSPKIG00000016648	rbm7	58	60.897	Paramormyrops_kingsleyae
ENSCHOG00000012747	-	96	53.793	ENSPMGG00000001523	rbm7	90	67.500	Periophthalmus_magnuspinnatus
ENSCHOG00000012747	-	100	87.162	ENSPEMG00000011553	-	58	87.162	Peromyscus_maniculatus_bairdii
ENSCHOG00000012747	-	58	66.279	ENSPMAG00000001518	-	97	66.279	Petromyzon_marinus
ENSCHOG00000012747	-	93	56.338	ENSPFOG00000002193	rbm7	50	55.714	Poecilia_formosa
ENSCHOG00000012747	-	93	56.338	ENSPMEG00000003603	rbm7	50	55.714	Poecilia_mexicana
ENSCHOG00000012747	-	93	56.338	ENSPREG00000015610	rbm7	52	53.793	Poecilia_reticulata
ENSCHOG00000012747	-	100	93.919	ENSPPYG00000003894	-	55	93.919	Pongo_abelii
ENSCHOG00000012747	-	62	65.217	ENSPCAG00000008368	-	64	65.217	Procavia_capensis
ENSCHOG00000012747	-	57	95.238	ENSPCOG00000022719	-	100	95.238	Propithecus_coquereli
ENSCHOG00000012747	-	99	95.238	ENSPVAG00000005294	-	55	95.238	Pteropus_vampyrus
ENSCHOG00000012747	-	96	55.782	ENSPNYG00000012084	rbm7	52	53.521	Pundamilia_nyererei
ENSCHOG00000012747	-	51	55.263	ENSPNAG00000009243	rbm11	84	55.263	Pygocentrus_nattereri
ENSCHOG00000012747	-	97	60.811	ENSPNAG00000012813	rbm7	56	58.974	Pygocentrus_nattereri
ENSCHOG00000012747	-	100	94.595	ENSRBIG00000044762	-	70	89.865	Rhinopithecus_bieti
ENSCHOG00000012747	-	100	94.595	ENSRROG00000032280	-	66	89.865	Rhinopithecus_roxellana
ENSCHOG00000012747	-	100	94.595	ENSSBOG00000027830	-	69	89.865	Saimiri_boliviensis_boliviensis
ENSCHOG00000012747	-	100	81.290	ENSSHAG00000008426	-	56	81.290	Sarcophilus_harrisii
ENSCHOG00000012747	-	97	64.238	ENSSFOG00015008458	rbm7	57	63.514	Scleropages_formosus
ENSCHOG00000012747	-	80	46.281	ENSSFOG00015013138	rbm11	69	58.621	Scleropages_formosus
ENSCHOG00000012747	-	96	55.782	ENSSMAG00000003040	rbm7	54	54.225	Scophthalmus_maximus
ENSCHOG00000012747	-	96	55.862	ENSSDUG00000005361	rbm7	52	54.225	Seriola_dumerili
ENSCHOG00000012747	-	96	55.862	ENSSLDG00000003221	rbm7	52	54.225	Seriola_lalandi_dorsalis
ENSCHOG00000012747	-	96	57.931	ENSSPAG00000019320	rbm7	68	72.093	Stegastes_partitus
ENSCHOG00000012747	-	100	90.541	ENSSSCG00000027905	-	55	89.865	Sus_scrofa
ENSCHOG00000012747	-	100	63.758	ENSTGUG00000000117	-	51	63.758	Taeniopygia_guttata
ENSCHOG00000012747	-	96	53.846	ENSTRUG00000020355	rbm7	53	52.817	Takifugu_rubripes
ENSCHOG00000012747	-	100	93.919	ENSTTRG00000001515	-	55	93.919	Tursiops_truncatus
ENSCHOG00000012747	-	100	91.216	ENSUAMG00000019095	-	56	90.541	Ursus_americanus
ENSCHOG00000012747	-	100	91.216	ENSUMAG00000003774	-	56	90.541	Ursus_maritimus
ENSCHOG00000012747	-	100	92.568	ENSVPAG00000006300	-	55	92.568	Vicugna_pacos
ENSCHOG00000012747	-	98	68.000	ENSXETG00000012654	rbm7	60	65.333	Xenopus_tropicalis
ENSCHOG00000012747	-	54	68.750	ENSXCOG00000001191	-	88	68.750	Xiphophorus_couchianus
ENSCHOG00000012747	-	96	51.701	ENSXMAG00000000970	rbm7	52	51.724	Xiphophorus_maculatus