EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000012860 (Gene tree)
Gene ID: -
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 1467 bases
Position: chrscaffold_245217:18-1484
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011388	RRM_1	PF00076.22	5.6e-31	1	2
ENSCHOP00000011388	RRM_1	PF00076.22	5.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000012895	NCL-201	1410	-	ENSCHOP00000011388	469 (aa)	-	UPI0001FA0BD8

Gene Model

Click here to download ENSCHOG00000012860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000012860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000012860	NCL	88	74.773	ENSG00000115053	NCL	98	75.172	Homo_sapiens
ENSCHOG00000012860	NCL	78	81.481	ENSAMEG00000016289	NCL	61	76.538	Ailuropoda_melanoleuca
ENSCHOG00000012860	NCL	99	60.663	ENSANAG00000024378	-	79	62.353	Aotus_nancymaae
ENSCHOG00000012860	NCL	78	80.159	ENSANAG00000035814	-	62	76.082	Aotus_nancymaae
ENSCHOG00000012860	NCL	88	79.835	ENSBTAG00000050728	-	54	79.747	Bos_taurus
ENSCHOG00000012860	NCL	99	71.709	ENSBTAG00000016174	NCL	64	74.944	Bos_taurus
ENSCHOG00000012860	NCL	78	80.159	ENSCJAG00000013538	NCL	61	76.027	Callithrix_jacchus
ENSCHOG00000012860	NCL	88	76.471	ENSCAFG00000011037	NCL	62	77.045	Canis_familiaris
ENSCHOG00000012860	NCL	88	76.471	ENSCAFG00020023145	NCL	65	77.045	Canis_lupus_dingo
ENSCHOG00000012860	NCL	79	84.444	ENSCHIG00000021052	-	59	80.163	Capra_hircus
ENSCHOG00000012860	NCL	89	68.650	ENSCHIG00000012143	-	70	68.445	Capra_hircus
ENSCHOG00000012860	NCL	88	70.337	ENSCHIG00000026149	-	63	71.106	Capra_hircus
ENSCHOG00000012860	NCL	88	75.847	ENSCHIG00000010894	-	66	76.018	Capra_hircus
ENSCHOG00000012860	NCL	88	66.055	ENSTSYG00000036886	-	72	66.977	Carlito_syrichta
ENSCHOG00000012860	NCL	78	79.530	ENSTSYG00000029779	-	62	72.358	Carlito_syrichta
ENSCHOG00000012860	NCL	78	80.159	ENSTSYG00000004355	-	61	74.658	Carlito_syrichta
ENSCHOG00000012860	NCL	78	73.810	ENSCAPG00000009405	NCL	60	71.034	Cavia_aperea
ENSCHOG00000012860	NCL	78	77.513	ENSCPOG00000001034	NCL	61	72.414	Cavia_porcellus
ENSCHOG00000012860	NCL	78	80.159	ENSCCAG00000021040	-	62	75.571	Cebus_capucinus
ENSCHOG00000012860	NCL	65	75.879	ENSCCAG00000000551	-	55	73.558	Cebus_capucinus
ENSCHOG00000012860	NCL	88	74.943	ENSCATG00000037033	NCL	61	74.828	Cercocebus_atys
ENSCHOG00000012860	NCL	88	72.893	ENSCLAG00000013080	NCL	61	73.684	Chinchilla_lanigera
ENSCHOG00000012860	NCL	78	80.475	ENSCSAG00000006660	NCL	80	80.376	Chlorocebus_sabaeus
ENSCHOG00000012860	NCL	68	78.882	ENSCANG00000036756	NCL	72	78.797	Colobus_angolensis_palliatus
ENSCHOG00000012860	NCL	88	71.034	ENSCGRG00001024315	-	61	71.429	Cricetulus_griseus_chok1gshd
ENSCHOG00000012860	NCL	79	65.885	ENSCGRG00001022350	-	61	62.028	Cricetulus_griseus_chok1gshd
ENSCHOG00000012860	NCL	79	65.885	ENSCGRG00000000507	-	61	62.028	Cricetulus_griseus_crigri
ENSCHOG00000012860	NCL	88	69.615	ENSCGRG00000017894	-	63	70.455	Cricetulus_griseus_crigri
ENSCHOG00000012860	NCL	78	82.322	ENSDNOG00000010783	-	62	77.727	Dasypus_novemcinctus
ENSCHOG00000012860	NCL	88	73.364	ENSDNOG00000046347	-	60	73.474	Dasypus_novemcinctus
ENSCHOG00000012860	NCL	78	70.370	ENSDORG00000012513	-	62	67.048	Dipodomys_ordii
ENSCHOG00000012860	NCL	77	62.125	ENSDORG00000023596	-	62	60.280	Dipodomys_ordii
ENSCHOG00000012860	NCL	78	75.989	ENSETEG00000018937	-	62	71.136	Echinops_telfairi
ENSCHOG00000012860	NCL	88	54.630	ENSETEG00000008553	-	87	54.695	Echinops_telfairi
ENSCHOG00000012860	NCL	76	57.609	ENSETEG00000008139	-	64	57.609	Echinops_telfairi
ENSCHOG00000012860	NCL	78	74.801	ENSETEG00000014756	-	84	75.538	Echinops_telfairi
ENSCHOG00000012860	NCL	88	75.737	ENSEASG00005008488	NCL	58	81.183	Equus_asinus_asinus
ENSCHOG00000012860	NCL	88	76.190	ENSECAG00000021868	NCL	61	76.082	Equus_caballus
ENSCHOG00000012860	NCL	78	74.074	ENSEEUG00000005913	NCL	61	70.139	Erinaceus_europaeus
ENSCHOG00000012860	NCL	88	75.847	ENSFCAG00000027622	NCL	62	76.417	Felis_catus
ENSCHOG00000012860	NCL	78	79.101	ENSFDAG00000014291	NCL	62	75.286	Fukomys_damarensis
ENSCHOG00000012860	NCL	88	74.773	ENSGGOG00000004300	NCL	81	67.277	Gorilla_gorilla
ENSCHOG00000012860	NCL	78	79.365	ENSHGLG00000002031	-	61	74.771	Heterocephalus_glaber_female
ENSCHOG00000012860	NCL	78	72.606	ENSHGLG00000011069	-	62	69.176	Heterocephalus_glaber_female
ENSCHOG00000012860	NCL	78	71.129	ENSHGLG00100000745	-	58	71.314	Heterocephalus_glaber_male
ENSCHOG00000012860	NCL	78	79.365	ENSHGLG00100014537	-	61	75.463	Heterocephalus_glaber_male
ENSCHOG00000012860	NCL	78	68.435	ENSJJAG00000016165	Ncl	61	65.668	Jaculus_jaculus
ENSCHOG00000012860	NCL	89	66.140	ENSLAFG00000013061	NCL	64	65.525	Loxodonta_africana
ENSCHOG00000012860	NCL	88	75.000	ENSMFAG00000040385	NCL	61	74.886	Macaca_fascicularis
ENSCHOG00000012860	NCL	88	75.000	ENSMMUG00000018094	NCL	61	74.886	Macaca_mulatta
ENSCHOG00000012860	NCL	88	75.000	ENSMNEG00000023839	NCL	64	76.256	Macaca_nemestrina
ENSCHOG00000012860	NCL	88	74.943	ENSMLEG00000028935	NCL	61	74.828	Mandrillus_leucophaeus
ENSCHOG00000012860	NCL	88	75.399	ENSMICG00000002538	-	61	76.659	Microcebus_murinus
ENSCHOG00000012860	NCL	88	64.524	ENSMICG00000029975	-	60	64.593	Microcebus_murinus
ENSCHOG00000012860	NCL	89	69.425	MGP_CAROLIEiJ_G0014362	Ncl	60	70.370	Mus_caroli
ENSCHOG00000012860	NCL	89	69.037	ENSMUSG00000026234	Ncl	61	69.977	Mus_musculus
ENSCHOG00000012860	NCL	89	70.208	MGP_PahariEiJ_G0027599	Ncl	60	70.000	Mus_pahari
ENSCHOG00000012860	NCL	89	68.966	MGP_SPRETEiJ_G0015164	Ncl	60	69.907	Mus_spretus
ENSCHOG00000012860	NCL	88	76.136	ENSMLUG00000014547	NCL	61	76.027	Myotis_lucifugus
ENSCHOG00000012860	NCL	88	71.429	ENSNGAG00000002454	-	60	71.296	Nannospalax_galili
ENSCHOG00000012860	NCL	78	60.743	ENSNGAG00000006188	-	51	61.995	Nannospalax_galili
ENSCHOG00000012860	NCL	89	63.757	ENSNLEG00000014107	-	60	63.874	Nomascus_leucogenys
ENSCHOG00000012860	NCL	77	76.011	ENSODEG00000002748	-	64	72.170	Octodon_degus
ENSCHOG00000012860	NCL	99	64.435	ENSODEG00000002441	-	66	68.150	Octodon_degus
ENSCHOG00000012860	NCL	78	75.066	ENSODEG00000003281	-	61	71.889	Octodon_degus
ENSCHOG00000012860	NCL	78	53.456	ENSODEG00000007803	-	56	52.968	Octodon_degus
ENSCHOG00000012860	NCL	78	77.573	ENSOCUG00000004312	NCL	61	72.471	Oryctolagus_cuniculus
ENSCHOG00000012860	NCL	78	75.668	ENSOGAG00000027852	NCL	61	75.543	Otolemur_garnettii
ENSCHOG00000012860	NCL	78	69.333	ENSOARG00000004072	-	71	66.744	Ovis_aries
ENSCHOG00000012860	NCL	88	77.064	ENSOARG00000020709	-	64	77.189	Ovis_aries
ENSCHOG00000012860	NCL	88	76.620	ENSOARG00000013710	-	73	77.030	Ovis_aries
ENSCHOG00000012860	NCL	65	74.775	ENSOARG00000013270	-	55	74.775	Ovis_aries
ENSCHOG00000012860	NCL	88	74.318	ENSPPAG00000011619	NCL	62	75.799	Pan_paniscus
ENSCHOG00000012860	NCL	88	75.566	ENSPPRG00000012603	NCL	62	76.136	Panthera_pardus
ENSCHOG00000012860	NCL	89	75.395	ENSPTIG00000010393	NCL	62	76.136	Panthera_tigris_altaica
ENSCHOG00000012860	NCL	88	74.603	ENSPTRG00000013025	NCL	81	67.123	Pan_troglodytes
ENSCHOG00000012860	NCL	88	75.000	ENSPANG00000010292	NCL	61	74.886	Papio_anubis
ENSCHOG00000012860	NCL	88	67.793	ENSPPYG00000013265	NCL	62	67.647	Pongo_abelii
ENSCHOG00000012860	NCL	88	77.169	ENSPCOG00000003051	-	61	77.523	Propithecus_coquereli
ENSCHOG00000012860	NCL	88	72.748	ENSPCOG00000004160	-	65	76.438	Propithecus_coquereli
ENSCHOG00000012860	NCL	88	77.931	ENSPVAG00000000297	NCL	61	78.522	Pteropus_vampyrus
ENSCHOG00000012860	NCL	89	70.023	ENSRNOG00000018273	Ncl	61	70.737	Rattus_norvegicus
ENSCHOG00000012860	NCL	81	84.028	ENSRBIG00000035396	-	62	82.474	Rhinopithecus_bieti
ENSCHOG00000012860	NCL	88	72.727	ENSRBIG00000037525	-	62	73.973	Rhinopithecus_bieti
ENSCHOG00000012860	NCL	99	71.390	ENSRROG00000036103	-	66	73.775	Rhinopithecus_roxellana
ENSCHOG00000012860	NCL	88	74.773	ENSRROG00000028756	-	62	76.027	Rhinopithecus_roxellana
ENSCHOG00000012860	NCL	78	79.894	ENSSBOG00000029193	-	62	75.510	Saimiri_boliviensis_boliviensis
ENSCHOG00000012860	NCL	89	71.132	ENSSBOG00000027549	-	65	75.342	Saimiri_boliviensis_boliviensis
ENSCHOG00000012860	NCL	78	80.952	ENSSSCG00000016275	NCL	62	75.839	Sus_scrofa
ENSCHOG00000012860	NCL	81	69.577	ENSTBEG00000001546	-	61	66.284	Tupaia_belangeri
ENSCHOG00000012860	NCL	87	75.289	ENSTTRG00000009094	NCL	62	74.828	Tursiops_truncatus
ENSCHOG00000012860	NCL	78	81.746	ENSUAMG00000005639	NCL	87	77.294	Ursus_americanus
ENSCHOG00000012860	NCL	78	81.746	ENSUMAG00000015789	NCL	61	77.346	Ursus_maritimus
ENSCHOG00000012860	NCL	88	76.815	ENSVVUG00000025564	NCL	60	76.471	Vulpes_vulpes