EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000012865 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 38557 bases
Position: chrGeneScaffold_774:10421-48977
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011405	DUF1604	PF07713.13	2.4e-10	1	1
ENSCHOP00000011405	G-patch	PF01585.23	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000012912	GPATCH1-201	2595	-	ENSCHOP00000011405	864 (aa)	-	UPI0001FA0BDD

Gene Model

Click here to download ENSCHOG00000012865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000012865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000012865	GPATCH1	89	80.311	ENSG00000076650	GPATCH1	92	76.879	Homo_sapiens
ENSCHOG00000012865	GPATCH1	100	77.662	ENSAMEG00000015575	GPATCH1	92	77.662	Ailuropoda_melanoleuca
ENSCHOG00000012865	GPATCH1	74	63.717	ENSAOCG00000006668	gpatch1	78	58.986	Amphiprion_ocellaris
ENSCHOG00000012865	GPATCH1	74	58.796	ENSAPEG00000000026	gpatch1	77	58.796	Amphiprion_percula
ENSCHOG00000012865	GPATCH1	99	42.668	ENSATEG00000014494	gpatch1	92	43.483	Anabas_testudineus
ENSCHOG00000012865	GPATCH1	89	54.090	ENSAPLG00000007584	GPATCH1	91	54.446	Anas_platyrhynchos
ENSCHOG00000012865	GPATCH1	89	80.311	ENSANAG00000027002	GPATCH1	83	80.311	Aotus_nancymaae
ENSCHOG00000012865	GPATCH1	80	47.230	ENSACLG00000024740	gpatch1	72	46.694	Astatotilapia_calliptera
ENSCHOG00000012865	GPATCH1	83	64.815	ENSAMXG00000020177	gpatch1	83	64.815	Astyanax_mexicanus
ENSCHOG00000012865	GPATCH1	89	79.118	ENSBTAG00000000721	GPATCH1	83	79.118	Bos_taurus
ENSCHOG00000012865	GPATCH1	59	30.682	WBGene00011109	R07E5.1	60	30.682	Caenorhabditis_elegans
ENSCHOG00000012865	GPATCH1	89	79.922	ENSCJAG00000000684	GPATCH1	83	79.922	Callithrix_jacchus
ENSCHOG00000012865	GPATCH1	100	78.266	ENSCAFG00000007457	GPATCH1	78	78.266	Canis_familiaris
ENSCHOG00000012865	GPATCH1	89	81.477	ENSCAFG00020019731	GPATCH1	83	81.477	Canis_lupus_dingo
ENSCHOG00000012865	GPATCH1	89	80.156	ENSCHIG00000019626	GPATCH1	84	79.507	Capra_hircus
ENSCHOG00000012865	GPATCH1	100	68.312	ENSCAPG00000008827	GPATCH1	96	68.657	Cavia_aperea
ENSCHOG00000012865	GPATCH1	100	70.358	ENSCPOG00000024477	GPATCH1	100	70.104	Cavia_porcellus
ENSCHOG00000012865	GPATCH1	89	80.699	ENSCCAG00000024676	GPATCH1	83	80.699	Cebus_capucinus
ENSCHOG00000012865	GPATCH1	89	80.595	ENSCATG00000043637	GPATCH1	92	76.905	Cercocebus_atys
ENSCHOG00000012865	GPATCH1	89	74.352	ENSCLAG00000003395	-	86	74.741	Chinchilla_lanigera
ENSCHOG00000012865	GPATCH1	81	94.419	ENSCSAG00000004743	GPATCH1	92	74.220	Chlorocebus_sabaeus
ENSCHOG00000012865	GPATCH1	86	59.492	ENSCPBG00000000666	GPATCH1	91	60.929	Chrysemys_picta_bellii
ENSCHOG00000012865	GPATCH1	82	82.540	ENSCANG00000012540	GPATCH1	97	74.510	Colobus_angolensis_palliatus
ENSCHOG00000012865	GPATCH1	100	69.231	ENSCGRG00001016736	Gpatch1	96	69.575	Cricetulus_griseus_chok1gshd
ENSCHOG00000012865	GPATCH1	73	96.269	ENSCGRG00000005069	Gpatch1	72	96.269	Cricetulus_griseus_crigri
ENSCHOG00000012865	GPATCH1	70	53.953	ENSCSEG00000019456	-	76	53.953	Cynoglossus_semilaevis
ENSCHOG00000012865	GPATCH1	83	59.447	ENSDARG00000033418	gpatch1	78	59.447	Danio_rerio
ENSCHOG00000012865	GPATCH1	89	85.104	ENSDNOG00000005291	GPATCH1	86	85.104	Dasypus_novemcinctus
ENSCHOG00000012865	GPATCH1	89	70.725	ENSDORG00000012546	Gpatch1	86	70.725	Dipodomys_ordii
ENSCHOG00000012865	GPATCH1	60	40.336	FBgn0036386	CG8833	55	40.336	Drosophila_melanogaster
ENSCHOG00000012865	GPATCH1	99	65.848	ENSETEG00000003626	GPATCH1	83	68.264	Echinops_telfairi
ENSCHOG00000012865	GPATCH1	77	42.021	ENSEBUG00000011286	gpatch1	73	43.085	Eptatretus_burgeri
ENSCHOG00000012865	GPATCH1	89	79.896	ENSEASG00005021162	GPATCH1	85	79.810	Equus_asinus_asinus
ENSCHOG00000012865	GPATCH1	89	80.415	ENSECAG00000022743	GPATCH1	80	80.415	Equus_caballus
ENSCHOG00000012865	GPATCH1	70	70.149	ENSEEUG00000012925	GPATCH1	65	70.149	Erinaceus_europaeus
ENSCHOG00000012865	GPATCH1	65	57.604	ENSELUG00000018195	gpatch1	78	58.986	Esox_lucius
ENSCHOG00000012865	GPATCH1	100	76.505	ENSFCAG00000014917	GPATCH1	92	76.505	Felis_catus
ENSCHOG00000012865	GPATCH1	89	56.194	ENSFALG00000007821	GPATCH1	82	56.122	Ficedula_albicollis
ENSCHOG00000012865	GPATCH1	89	73.930	ENSFDAG00000003871	GPATCH1	85	74.189	Fukomys_damarensis
ENSCHOG00000012865	GPATCH1	87	42.643	ENSGMOG00000003830	gpatch1	86	47.075	Gadus_morhua
ENSCHOG00000012865	GPATCH1	89	57.308	ENSGALG00000004839	GPATCH1	85	57.308	Gallus_gallus
ENSCHOG00000012865	GPATCH1	74	53.917	ENSGACG00000017544	gpatch1	79	53.917	Gasterosteus_aculeatus
ENSCHOG00000012865	GPATCH1	89	59.250	ENSGAGG00000010067	GPATCH1	82	59.120	Gopherus_agassizii
ENSCHOG00000012865	GPATCH1	89	80.311	ENSGGOG00000010862	GPATCH1	95	76.879	Gorilla_gorilla
ENSCHOG00000012865	GPATCH1	80	47.010	ENSHBUG00000023462	gpatch1	83	44.471	Haplochromis_burtoni
ENSCHOG00000012865	GPATCH1	100	72.864	ENSHGLG00000009334	GPATCH1	87	89.302	Heterocephalus_glaber_female
ENSCHOG00000012865	GPATCH1	92	89.767	ENSHGLG00100018074	GPATCH1	88	89.767	Heterocephalus_glaber_male
ENSCHOG00000012865	GPATCH1	83	65.741	ENSIPUG00000014977	gpatch1	77	65.741	Ictalurus_punctatus
ENSCHOG00000012865	GPATCH1	100	75.723	ENSSTOG00000003720	GPATCH1	93	75.723	Ictidomys_tridecemlineatus
ENSCHOG00000012865	GPATCH1	89	75.357	ENSJJAG00000023765	Gpatch1	92	72.538	Jaculus_jaculus
ENSCHOG00000012865	GPATCH1	89	45.707	ENSKMAG00000017950	gpatch1	82	45.614	Kryptolebias_marmoratus
ENSCHOG00000012865	GPATCH1	74	56.364	ENSLBEG00000026527	gpatch1	76	59.091	Labrus_bergylta
ENSCHOG00000012865	GPATCH1	89	52.704	ENSLACG00000008130	GPATCH1	89	52.455	Latimeria_chalumnae
ENSCHOG00000012865	GPATCH1	80	51.627	ENSLOCG00000001800	gpatch1	82	50.446	Lepisosteus_oculatus
ENSCHOG00000012865	GPATCH1	89	80.934	ENSLAFG00000013589	GPATCH1	92	77.778	Loxodonta_africana
ENSCHOG00000012865	GPATCH1	89	80.570	ENSMFAG00000034418	GPATCH1	87	80.570	Macaca_fascicularis
ENSCHOG00000012865	GPATCH1	89	80.336	ENSMMUG00000011790	GPATCH1	92	76.905	Macaca_mulatta
ENSCHOG00000012865	GPATCH1	89	80.440	ENSMNEG00000045084	GPATCH1	94	76.994	Macaca_nemestrina
ENSCHOG00000012865	GPATCH1	89	73.187	ENSMLEG00000043840	GPATCH1	97	70.520	Mandrillus_leucophaeus
ENSCHOG00000012865	GPATCH1	80	47.091	ENSMZEG00005001926	gpatch1	73	46.559	Maylandia_zebra
ENSCHOG00000012865	GPATCH1	89	57.197	ENSMGAG00000005775	GPATCH1	82	57.125	Meleagris_gallopavo
ENSCHOG00000012865	GPATCH1	96	73.589	ENSMICG00000004829	GPATCH1	85	92.021	Microcebus_murinus
ENSCHOG00000012865	GPATCH1	89	74.098	ENSMOCG00000000174	Gpatch1	83	74.098	Microtus_ochrogaster
ENSCHOG00000012865	GPATCH1	71	59.067	ENSMMOG00000002140	gpatch1	74	61.658	Mola_mola
ENSCHOG00000012865	GPATCH1	89	67.270	ENSMODG00000012226	GPATCH1	82	67.270	Monodelphis_domestica
ENSCHOG00000012865	GPATCH1	72	61.084	ENSMALG00000014386	gpatch1	83	43.602	Monopterus_albus
ENSCHOG00000012865	GPATCH1	100	73.032	ENSMUSG00000063808	Gpatch1	92	73.032	Mus_musculus
ENSCHOG00000012865	GPATCH1	100	72.055	MGP_PahariEiJ_G0012816	Gpatch1	92	72.055	Mus_pahari
ENSCHOG00000012865	GPATCH1	100	72.023	MGP_SPRETEiJ_G0030681	Gpatch1	92	72.832	Mus_spretus
ENSCHOG00000012865	GPATCH1	100	76.505	ENSMPUG00000007658	GPATCH1	92	76.505	Mustela_putorius_furo
ENSCHOG00000012865	GPATCH1	89	79.637	ENSMLUG00000012161	GPATCH1	83	79.637	Myotis_lucifugus
ENSCHOG00000012865	GPATCH1	89	77.821	ENSNGAG00000012455	Gpatch1	83	77.821	Nannospalax_galili
ENSCHOG00000012865	GPATCH1	89	79.922	ENSNLEG00000007659	GPATCH1	92	76.416	Nomascus_leucogenys
ENSCHOG00000012865	GPATCH1	76	64.804	ENSMEUG00000015174	GPATCH1	71	64.804	Notamacropus_eugenii
ENSCHOG00000012865	GPATCH1	99	69.364	ENSODEG00000007103	GPATCH1	92	69.711	Octodon_degus
ENSCHOG00000012865	GPATCH1	80	47.899	ENSONIG00000003302	gpatch1	84	46.338	Oreochromis_niloticus
ENSCHOG00000012865	GPATCH1	100	61.268	ENSOANG00000012732	GPATCH1	82	66.365	Ornithorhynchus_anatinus
ENSCHOG00000012865	GPATCH1	100	75.810	ENSOCUG00000015905	GPATCH1	92	75.810	Oryctolagus_cuniculus
ENSCHOG00000012865	GPATCH1	89	43.257	ENSORLG00000018706	gpatch1	81	41.985	Oryzias_latipes
ENSCHOG00000012865	GPATCH1	89	41.340	ENSOMEG00000022688	gpatch1	83	42.893	Oryzias_melastigma
ENSCHOG00000012865	GPATCH1	84	78.700	ENSOGAG00000004016	GPATCH1	91	78.700	Otolemur_garnettii
ENSCHOG00000012865	GPATCH1	89	79.637	ENSOARG00000004365	GPATCH1	84	78.926	Ovis_aries
ENSCHOG00000012865	GPATCH1	89	80.052	ENSPPAG00000020990	GPATCH1	92	76.647	Pan_paniscus
ENSCHOG00000012865	GPATCH1	100	76.505	ENSPPRG00000017245	GPATCH1	92	76.505	Panthera_pardus
ENSCHOG00000012865	GPATCH1	89	80.804	ENSPTIG00000019649	GPATCH1	92	77.315	Panthera_tigris_altaica
ENSCHOG00000012865	GPATCH1	89	79.793	ENSPTRG00000010803	GPATCH1	92	76.416	Pan_troglodytes
ENSCHOG00000012865	GPATCH1	89	80.181	ENSPANG00000012374	GPATCH1	86	80.181	Papio_anubis
ENSCHOG00000012865	GPATCH1	74	62.673	ENSPKIG00000020745	gpatch1	68	62.673	Paramormyrops_kingsleyae
ENSCHOG00000012865	GPATCH1	89	57.471	ENSPSIG00000013433	GPATCH1	82	57.545	Pelodiscus_sinensis
ENSCHOG00000012865	GPATCH1	100	70.139	ENSPEMG00000000636	Gpatch1	83	74.189	Peromyscus_maniculatus_bairdii
ENSCHOG00000012865	GPATCH1	89	66.710	ENSPCIG00000021003	GPATCH1	88	66.710	Phascolarctos_cinereus
ENSCHOG00000012865	GPATCH1	59	47.895	ENSPREG00000008264	gpatch1	67	47.895	Poecilia_reticulata
ENSCHOG00000012865	GPATCH1	83	93.488	ENSPPYG00000009824	GPATCH1	89	93.488	Pongo_abelii
ENSCHOG00000012865	GPATCH1	80	76.886	ENSPCAG00000005931	GPATCH1	85	71.825	Procavia_capensis
ENSCHOG00000012865	GPATCH1	89	74.093	ENSPCOG00000009674	GPATCH1	87	74.093	Propithecus_coquereli
ENSCHOG00000012865	GPATCH1	90	81.571	ENSPVAG00000017767	GPATCH1	84	81.571	Pteropus_vampyrus
ENSCHOG00000012865	GPATCH1	80	47.486	ENSPNYG00000018189	gpatch1	81	46.794	Pundamilia_nyererei
ENSCHOG00000012865	GPATCH1	83	62.037	ENSPNAG00000013187	gpatch1	78	62.037	Pygocentrus_nattereri
ENSCHOG00000012865	GPATCH1	89	75.486	ENSRNOG00000011584	Gpatch1	92	72.569	Rattus_norvegicus
ENSCHOG00000012865	GPATCH1	86	79.759	ENSRBIG00000034723	GPATCH1	84	79.759	Rhinopithecus_bieti
ENSCHOG00000012865	GPATCH1	89	80.440	ENSRROG00000024428	GPATCH1	92	76.879	Rhinopithecus_roxellana
ENSCHOG00000012865	GPATCH1	89	79.793	ENSSBOG00000034650	GPATCH1	83	79.793	Saimiri_boliviensis_boliviensis
ENSCHOG00000012865	GPATCH1	100	63.322	ENSSHAG00000016016	GPATCH1	93	63.552	Sarcophilus_harrisii
ENSCHOG00000012865	GPATCH1	73	64.815	ENSSFOG00015011535	gpatch1	75	65.741	Scleropages_formosus
ENSCHOG00000012865	GPATCH1	80	42.632	ENSSMAG00000002883	gpatch1	86	40.371	Scophthalmus_maximus
ENSCHOG00000012865	GPATCH1	74	57.848	ENSSDUG00000007444	gpatch1	77	59.641	Seriola_dumerili
ENSCHOG00000012865	GPATCH1	74	58.986	ENSSLDG00000002856	gpatch1	77	60.829	Seriola_lalandi_dorsalis
ENSCHOG00000012865	GPATCH1	70	75.497	ENSSARG00000004108	GPATCH1	65	75.331	Sorex_araneus
ENSCHOG00000012865	GPATCH1	89	80.285	ENSSSCG00000002865	GPATCH1	85	80.285	Sus_scrofa
ENSCHOG00000012865	GPATCH1	89	57.050	ENSTGUG00000009401	GPATCH1	83	56.202	Taeniopygia_guttata
ENSCHOG00000012865	GPATCH1	74	55.093	ENSTRUG00000005785	-	76	55.093	Takifugu_rubripes
ENSCHOG00000012865	GPATCH1	74	55.093	ENSTRUG00000025081	gpatch1	76	55.093	Takifugu_rubripes
ENSCHOG00000012865	GPATCH1	74	55.760	ENSTNIG00000002554	gpatch1	84	58.065	Tetraodon_nigroviridis
ENSCHOG00000012865	GPATCH1	61	74.055	ENSTBEG00000007750	-	75	74.055	Tupaia_belangeri
ENSCHOG00000012865	GPATCH1	89	84.109	ENSTTRG00000012221	GPATCH1	92	80.623	Tursiops_truncatus
ENSCHOG00000012865	GPATCH1	97	77.143	ENSUMAG00000014645	GPATCH1	100	77.143	Ursus_maritimus
ENSCHOG00000012865	GPATCH1	71	92.381	ENSVPAG00000010313	GPATCH1	71	92.982	Vicugna_pacos
ENSCHOG00000012865	GPATCH1	89	81.088	ENSVVUG00000016572	GPATCH1	83	81.088	Vulpes_vulpes
ENSCHOG00000012865	GPATCH1	99	46.682	ENSXETG00000018276	gpatch1	93	48.880	Xenopus_tropicalis