EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000013024 (Gene tree)
Gene ID: -
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 19132 bases
Position: chrGeneScaffold_3690:26-19157
Accession: 17631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011545	RNA_pol_I_A49	PF06870.12	7.5e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000013068	POLR1E-201	1434	-	ENSCHOP00000011545	477 (aa)	-	UPI0001FA0952

Gene Model

Click here to download ENSCHOG00000013024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000013024's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000013024	POLR1E	99	72.651	ENSG00000137054	POLR1E	99	72.651	Homo_sapiens
ENSCHOG00000013024	POLR1E	84	35.437	ENSAPOG00000012452	polr1e	98	35.437	Acanthochromis_polyacanthus
ENSCHOG00000013024	POLR1E	78	88.772	ENSAMEG00000010193	POLR1E	78	88.772	Ailuropoda_melanoleuca
ENSCHOG00000013024	POLR1E	85	37.346	ENSACIG00000009884	polr1e	99	38.071	Amphilophus_citrinellus
ENSCHOG00000013024	POLR1E	82	39.141	ENSAOCG00000005665	polr1e	95	39.141	Amphiprion_ocellaris
ENSCHOG00000013024	POLR1E	82	38.889	ENSAPEG00000020581	polr1e	95	38.889	Amphiprion_percula
ENSCHOG00000013024	POLR1E	82	39.698	ENSATEG00000020609	polr1e	95	39.698	Anabas_testudineus
ENSCHOG00000013024	POLR1E	66	75.000	ENSAPLG00000010340	POLR1E	82	75.000	Anas_platyrhynchos
ENSCHOG00000013024	POLR1E	95	71.366	ENSANAG00000038046	POLR1E	94	76.142	Aotus_nancymaae
ENSCHOG00000013024	POLR1E	83	37.437	ENSACLG00000013685	polr1e	94	37.437	Astatotilapia_calliptera
ENSCHOG00000013024	POLR1E	84	33.981	ENSAMXG00000018181	polr1e	98	33.981	Astyanax_mexicanus
ENSCHOG00000013024	POLR1E	83	77.273	ENSBTAG00000012243	POLR1E	95	77.273	Bos_taurus
ENSCHOG00000013024	POLR1E	100	64.854	ENSCJAG00000010512	POLR1E	100	64.854	Callithrix_jacchus
ENSCHOG00000013024	POLR1E	96	73.478	ENSCAFG00000002377	POLR1E	94	78.934	Canis_familiaris
ENSCHOG00000013024	POLR1E	83	78.680	ENSCAFG00020017851	POLR1E	94	78.680	Canis_lupus_dingo
ENSCHOG00000013024	POLR1E	83	76.010	ENSCHIG00000019479	POLR1E	95	76.010	Capra_hircus
ENSCHOG00000013024	POLR1E	83	76.650	ENSTSYG00000002075	POLR1E	94	76.650	Carlito_syrichta
ENSCHOG00000013024	POLR1E	60	85.915	ENSCAPG00000015653	POLR1E	98	85.915	Cavia_aperea
ENSCHOG00000013024	POLR1E	82	75.827	ENSCPOG00000009965	POLR1E	94	75.827	Cavia_porcellus
ENSCHOG00000013024	POLR1E	81	78.246	ENSCCAG00000029460	POLR1E	94	70.812	Cebus_capucinus
ENSCHOG00000013024	POLR1E	83	76.396	ENSCATG00000031732	POLR1E	93	85.022	Cercocebus_atys
ENSCHOG00000013024	POLR1E	71	76.540	ENSCLAG00000012701	POLR1E	90	76.540	Chinchilla_lanigera
ENSCHOG00000013024	POLR1E	83	75.888	ENSCSAG00000010782	POLR1E	94	75.888	Chlorocebus_sabaeus
ENSCHOG00000013024	POLR1E	82	61.832	ENSCPBG00000006923	POLR1E	95	61.832	Chrysemys_picta_bellii
ENSCHOG00000013024	POLR1E	100	71.908	ENSCANG00000036112	POLR1E	92	85.714	Colobus_angolensis_palliatus
ENSCHOG00000013024	POLR1E	83	71.827	ENSCGRG00001006197	Polr1e	91	71.827	Cricetulus_griseus_chok1gshd
ENSCHOG00000013024	POLR1E	83	71.320	ENSCGRG00000006430	Polr1e	91	71.320	Cricetulus_griseus_crigri
ENSCHOG00000013024	POLR1E	82	37.722	ENSCSEG00000005121	polr1e	96	37.722	Cynoglossus_semilaevis
ENSCHOG00000013024	POLR1E	82	37.121	ENSCVAG00000019759	polr1e	95	37.121	Cyprinodon_variegatus
ENSCHOG00000013024	POLR1E	79	38.903	ENSDARG00000006434	polr1e	95	38.095	Danio_rerio
ENSCHOG00000013024	POLR1E	83	71.558	ENSDNOG00000010257	POLR1E	95	71.558	Dasypus_novemcinctus
ENSCHOG00000013024	POLR1E	70	78.979	ENSETEG00000018204	POLR1E	93	78.979	Echinops_telfairi
ENSCHOG00000013024	POLR1E	83	78.426	ENSEASG00005000675	POLR1E	94	78.426	Equus_asinus_asinus
ENSCHOG00000013024	POLR1E	83	78.426	ENSECAG00000014669	POLR1E	94	78.426	Equus_caballus
ENSCHOG00000013024	POLR1E	97	67.957	ENSEEUG00000011928	POLR1E	98	67.957	Erinaceus_europaeus
ENSCHOG00000013024	POLR1E	83	38.945	ENSELUG00000008150	polr1e	94	38.945	Esox_lucius
ENSCHOG00000013024	POLR1E	97	72.863	ENSFCAG00000013081	POLR1E	94	78.173	Felis_catus
ENSCHOG00000013024	POLR1E	83	55.330	ENSFALG00000012950	POLR1E	99	55.330	Ficedula_albicollis
ENSCHOG00000013024	POLR1E	82	73.791	ENSFDAG00000016917	POLR1E	94	73.791	Fukomys_damarensis
ENSCHOG00000013024	POLR1E	82	37.374	ENSFHEG00000009801	polr1e	95	37.374	Fundulus_heteroclitus
ENSCHOG00000013024	POLR1E	79	36.292	ENSGMOG00000003336	POLR1E	90	36.979	Gadus_morhua
ENSCHOG00000013024	POLR1E	84	53.250	ENSGALG00000005395	POLR1E	96	53.535	Gallus_gallus
ENSCHOG00000013024	POLR1E	82	37.343	ENSGAFG00000004850	polr1e	95	37.343	Gambusia_affinis
ENSCHOG00000013024	POLR1E	83	36.160	ENSGACG00000016087	polr1e	95	36.160	Gasterosteus_aculeatus
ENSCHOG00000013024	POLR1E	83	56.061	ENSGAGG00000001659	POLR1E	97	55.330	Gopherus_agassizii
ENSCHOG00000013024	POLR1E	99	72.842	ENSGGOG00000001882	POLR1E	93	83.761	Gorilla_gorilla
ENSCHOG00000013024	POLR1E	83	37.688	ENSHBUG00000002559	polr1e	94	37.688	Haplochromis_burtoni
ENSCHOG00000013024	POLR1E	82	75.573	ENSHGLG00000002036	POLR1E	94	75.573	Heterocephalus_glaber_female
ENSCHOG00000013024	POLR1E	82	75.827	ENSHGLG00100012784	POLR1E	94	75.827	Heterocephalus_glaber_male
ENSCHOG00000013024	POLR1E	82	37.468	ENSHCOG00000002774	polr1e	94	37.468	Hippocampus_comes
ENSCHOG00000013024	POLR1E	83	37.093	ENSIPUG00000003019	polr1e	95	37.093	Ictalurus_punctatus
ENSCHOG00000013024	POLR1E	83	76.142	ENSSTOG00000009810	POLR1E	94	76.142	Ictidomys_tridecemlineatus
ENSCHOG00000013024	POLR1E	83	73.604	ENSJJAG00000020731	Polr1e	91	73.604	Jaculus_jaculus
ENSCHOG00000013024	POLR1E	82	36.020	ENSKMAG00000000046	polr1e	95	36.020	Kryptolebias_marmoratus
ENSCHOG00000013024	POLR1E	83	39.098	ENSLBEG00000003104	polr1e	94	39.295	Labrus_bergylta
ENSCHOG00000013024	POLR1E	70	56.716	ENSLACG00000003416	POLR1E	93	56.716	Latimeria_chalumnae
ENSCHOG00000013024	POLR1E	83	43.147	ENSLOCG00000012859	polr1e	94	43.147	Lepisosteus_oculatus
ENSCHOG00000013024	POLR1E	78	86.667	ENSLAFG00000012831	POLR1E	94	76.396	Loxodonta_africana
ENSCHOG00000013024	POLR1E	83	76.650	ENSMFAG00000045465	POLR1E	93	85.463	Macaca_fascicularis
ENSCHOG00000013024	POLR1E	83	76.650	ENSMMUG00000017892	POLR1E	93	85.463	Macaca_mulatta
ENSCHOG00000013024	POLR1E	83	70.223	ENSMNEG00000040283	POLR1E	94	70.223	Macaca_nemestrina
ENSCHOG00000013024	POLR1E	83	76.650	ENSMLEG00000031135	POLR1E	93	85.463	Mandrillus_leucophaeus
ENSCHOG00000013024	POLR1E	82	37.374	ENSMAMG00000001260	polr1e	94	37.374	Mastacembelus_armatus
ENSCHOG00000013024	POLR1E	83	37.688	ENSMZEG00005021536	polr1e	94	37.688	Maylandia_zebra
ENSCHOG00000013024	POLR1E	83	71.320	ENSMAUG00000021044	Polr1e	91	71.320	Mesocricetus_auratus
ENSCHOG00000013024	POLR1E	87	77.240	ENSMICG00000003673	POLR1E	95	77.240	Microcebus_murinus
ENSCHOG00000013024	POLR1E	82	73.282	ENSMOCG00000012920	Polr1e	91	73.282	Microtus_ochrogaster
ENSCHOG00000013024	POLR1E	84	38.272	ENSMMOG00000007391	polr1e	99	38.272	Mola_mola
ENSCHOG00000013024	POLR1E	79	66.491	ENSMODG00000002884	POLR1E	93	66.491	Monodelphis_domestica
ENSCHOG00000013024	POLR1E	82	38.945	ENSMALG00000002665	polr1e	94	38.945	Monopterus_albus
ENSCHOG00000013024	POLR1E	78	78.246	MGP_CAROLIEiJ_G0025967	Polr1e	100	68.382	Mus_caroli
ENSCHOG00000013024	POLR1E	78	77.895	ENSMUSG00000028318	Polr1e	99	68.382	Mus_musculus
ENSCHOG00000013024	POLR1E	78	79.930	MGP_PahariEiJ_G0024114	Polr1e	99	69.900	Mus_pahari
ENSCHOG00000013024	POLR1E	78	77.193	MGP_SPRETEiJ_G0026930	Polr1e	100	67.402	Mus_spretus
ENSCHOG00000013024	POLR1E	83	68.018	ENSMPUG00000006040	POLR1E	94	68.018	Mustela_putorius_furo
ENSCHOG00000013024	POLR1E	83	75.635	ENSMLUG00000012688	POLR1E	91	75.635	Myotis_lucifugus
ENSCHOG00000013024	POLR1E	83	75.381	ENSNGAG00000002520	Polr1e	91	75.381	Nannospalax_galili
ENSCHOG00000013024	POLR1E	83	37.940	ENSNBRG00000016822	polr1e	94	37.940	Neolamprologus_brichardi
ENSCHOG00000013024	POLR1E	99	72.000	ENSNLEG00000003616	POLR1E	93	85.903	Nomascus_leucogenys
ENSCHOG00000013024	POLR1E	64	73.750	ENSMEUG00000015372	-	80	73.750	Notamacropus_eugenii
ENSCHOG00000013024	POLR1E	60	78.947	ENSOPRG00000014206	POLR1E	79	78.947	Ochotona_princeps
ENSCHOG00000013024	POLR1E	87	71.028	ENSODEG00000014565	POLR1E	99	71.028	Octodon_degus
ENSCHOG00000013024	POLR1E	83	37.750	ENSONIG00000008921	polr1e	94	37.688	Oreochromis_niloticus
ENSCHOG00000013024	POLR1E	83	72.081	ENSOCUG00000024773	POLR1E	94	72.081	Oryctolagus_cuniculus
ENSCHOG00000013024	POLR1E	83	37.186	ENSORLG00000005143	polr1e	95	37.186	Oryzias_latipes
ENSCHOG00000013024	POLR1E	82	35.533	ENSORLG00020007271	polr1e	97	37.958	Oryzias_latipes_hni
ENSCHOG00000013024	POLR1E	83	36.935	ENSORLG00015000137	polr1e	95	36.935	Oryzias_latipes_hsok
ENSCHOG00000013024	POLR1E	82	36.364	ENSOMEG00000013264	polr1e	93	36.364	Oryzias_melastigma
ENSCHOG00000013024	POLR1E	83	78.934	ENSOGAG00000012981	POLR1E	92	78.934	Otolemur_garnettii
ENSCHOG00000013024	POLR1E	83	76.010	ENSOARG00000011465	POLR1E	91	76.010	Ovis_aries
ENSCHOG00000013024	POLR1E	99	73.053	ENSPPAG00000034566	POLR1E	93	85.903	Pan_paniscus
ENSCHOG00000013024	POLR1E	83	78.173	ENSPPRG00000005649	POLR1E	94	78.173	Panthera_pardus
ENSCHOG00000013024	POLR1E	83	78.173	ENSPTIG00000009774	POLR1E	94	78.173	Panthera_tigris_altaica
ENSCHOG00000013024	POLR1E	99	72.842	ENSPTRG00000020944	POLR1E	93	85.903	Pan_troglodytes
ENSCHOG00000013024	POLR1E	83	76.650	ENSPANG00000025563	POLR1E	93	85.463	Papio_anubis
ENSCHOG00000013024	POLR1E	84	38.861	ENSPKIG00000003562	polr1e	96	38.861	Paramormyrops_kingsleyae
ENSCHOG00000013024	POLR1E	80	56.430	ENSPSIG00000003274	POLR1E	89	56.430	Pelodiscus_sinensis
ENSCHOG00000013024	POLR1E	83	38.750	ENSPMGG00000024169	polr1e	96	38.750	Periophthalmus_magnuspinnatus
ENSCHOG00000013024	POLR1E	78	79.298	ENSPEMG00000019151	-	91	70.558	Peromyscus_maniculatus_bairdii
ENSCHOG00000013024	POLR1E	83	57.468	ENSPEMG00000022300	-	90	57.468	Peromyscus_maniculatus_bairdii
ENSCHOG00000013024	POLR1E	79	65.435	ENSPCIG00000014798	POLR1E	93	65.435	Phascolarctos_cinereus
ENSCHOG00000013024	POLR1E	82	35.000	ENSPFOG00000019627	polr1e	94	35.000	Poecilia_formosa
ENSCHOG00000013024	POLR1E	82	37.626	ENSPLAG00000022679	polr1e	95	37.626	Poecilia_latipinna
ENSCHOG00000013024	POLR1E	70	40.000	ENSPMEG00000022123	polr1e	86	40.000	Poecilia_mexicana
ENSCHOG00000013024	POLR1E	82	37.594	ENSPREG00000009470	polr1e	95	37.594	Poecilia_reticulata
ENSCHOG00000013024	POLR1E	83	75.888	ENSPPYG00000019061	POLR1E	94	75.888	Pongo_abelii
ENSCHOG00000013024	POLR1E	98	70.576	ENSPCOG00000027448	POLR1E	94	78.680	Propithecus_coquereli
ENSCHOG00000013024	POLR1E	100	75.681	ENSPVAG00000007940	POLR1E	100	75.681	Pteropus_vampyrus
ENSCHOG00000013024	POLR1E	82	37.879	ENSPNYG00000001032	polr1e	94	37.879	Pundamilia_nyererei
ENSCHOG00000013024	POLR1E	83	34.596	ENSPNAG00000006987	polr1e	95	34.596	Pygocentrus_nattereri
ENSCHOG00000013024	POLR1E	83	70.051	ENSRNOG00000012664	Polr1e	91	70.051	Rattus_norvegicus
ENSCHOG00000013024	POLR1E	96	72.867	ENSRBIG00000034214	POLR1E	100	75.591	Rhinopithecus_bieti
ENSCHOG00000013024	POLR1E	83	76.142	ENSRROG00000031986	POLR1E	93	84.581	Rhinopithecus_roxellana
ENSCHOG00000013024	POLR1E	96	69.762	ENSSBOG00000021415	POLR1E	94	76.904	Saimiri_boliviensis_boliviensis
ENSCHOG00000013024	POLR1E	70	66.967	ENSSHAG00000016084	POLR1E	92	66.967	Sarcophilus_harrisii
ENSCHOG00000013024	POLR1E	83	40.399	ENSSFOG00015002293	polr1e	95	40.050	Scleropages_formosus
ENSCHOG00000013024	POLR1E	82	40.152	ENSSMAG00000011672	polr1e	88	40.152	Scophthalmus_maximus
ENSCHOG00000013024	POLR1E	82	39.141	ENSSDUG00000022279	polr1e	94	39.141	Seriola_dumerili
ENSCHOG00000013024	POLR1E	82	38.636	ENSSLDG00000024918	polr1e	94	38.636	Seriola_lalandi_dorsalis
ENSCHOG00000013024	POLR1E	61	71.552	ENSSARG00000009810	-	81	71.552	Sorex_araneus
ENSCHOG00000013024	POLR1E	83	59.898	ENSSPUG00000009499	POLR1E	94	59.898	Sphenodon_punctatus
ENSCHOG00000013024	POLR1E	82	38.889	ENSSPAG00000021240	polr1e	95	38.889	Stegastes_partitus
ENSCHOG00000013024	POLR1E	83	78.030	ENSSSCG00000005347	POLR1E	95	78.030	Sus_scrofa
ENSCHOG00000013024	POLR1E	78	61.620	ENSTGUG00000007169	POLR1E	84	61.620	Taeniopygia_guttata
ENSCHOG00000013024	POLR1E	82	38.366	ENSTRUG00000020779	polr1e	99	38.501	Takifugu_rubripes
ENSCHOG00000013024	POLR1E	82	38.287	ENSTNIG00000017812	polr1e	95	38.287	Tetraodon_nigroviridis
ENSCHOG00000013024	POLR1E	97	72.414	ENSTBEG00000013786	POLR1E	98	72.414	Tupaia_belangeri
ENSCHOG00000013024	POLR1E	93	76.786	ENSTTRG00000008294	POLR1E	99	75.420	Tursiops_truncatus
ENSCHOG00000013024	POLR1E	83	78.680	ENSUAMG00000012474	POLR1E	94	78.680	Ursus_americanus
ENSCHOG00000013024	POLR1E	83	78.680	ENSUMAG00000011496	POLR1E	94	78.680	Ursus_maritimus
ENSCHOG00000013024	POLR1E	89	80.235	ENSVPAG00000009048	POLR1E	100	80.235	Vicugna_pacos
ENSCHOG00000013024	POLR1E	83	78.934	ENSVVUG00000019954	POLR1E	94	78.934	Vulpes_vulpes
ENSCHOG00000013024	POLR1E	83	47.118	ENSXETG00000006533	polr1e	95	47.118	Xenopus_tropicalis
ENSCHOG00000013024	POLR1E	82	37.594	ENSXCOG00000013706	polr1e	95	37.594	Xiphophorus_couchianus
ENSCHOG00000013024	POLR1E	82	38.346	ENSXMAG00000012484	polr1e	95	38.346	Xiphophorus_maculatus