EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000013232 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 2813 bases
Position: chrscaffold_53725:3147-5959
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011718	MMR_HSR1	PF01926.23	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000013268	-	318	-	ENSCHOP00000011718	106 (aa)	-	UPI0001FA0A12

Gene Model

Click here to download ENSCHOG00000013232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000013232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000013232	-	99	31.429	ENSCHOG00000000472	-	53	31.429
ENSCHOG00000013232	-	86	36.458	ENSCHOG00000007836	ARL4D	72	36.458
ENSCHOG00000013232	-	91	42.268	ENSCHOG00000002404	ARL14	51	42.268
ENSCHOG00000013232	-	92	77.320	ENSCHOG00000005062	ARL5A	54	77.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000013232	-	100	81.132	ENSAMEG00000004195	ARL5C	59	81.132	Ailuropoda_melanoleuca
ENSCHOG00000013232	-	100	82.075	ENSACAG00000003879	-	59	82.075	Anolis_carolinensis
ENSCHOG00000013232	-	100	87.736	ENSCAFG00000016525	ARL5C	59	87.736	Canis_familiaris
ENSCHOG00000013232	-	100	91.509	ENSCHIG00000008208	ARL5C	60	91.509	Capra_hircus
ENSCHOG00000013232	-	54	77.193	ENSCANG00000040315	-	70	77.193	Colobus_angolensis_palliatus
ENSCHOG00000013232	-	100	76.415	ENSCGRG00001000695	Arl5c	60	76.415	Cricetulus_griseus_chok1gshd
ENSCHOG00000013232	-	100	77.358	ENSCGRG00000007376	Arl5c	59	77.358	Cricetulus_griseus_crigri
ENSCHOG00000013232	-	100	91.509	ENSDNOG00000019741	ARL5C	59	91.509	Dasypus_novemcinctus
ENSCHOG00000013232	-	100	84.906	ENSDORG00000016304	Arl5c	59	84.906	Dipodomys_ordii
ENSCHOG00000013232	-	100	89.623	ENSECAG00000009024	ARL5C	59	89.623	Equus_caballus
ENSCHOG00000013232	-	100	89.623	ENSFCAG00000009962	ARL5C	59	89.623	Felis_catus
ENSCHOG00000013232	-	100	90.566	ENSSTOG00000011104	ARL5C	59	90.566	Ictidomys_tridecemlineatus
ENSCHOG00000013232	-	100	77.358	ENSLACG00000015332	ARL5C	59	77.358	Latimeria_chalumnae
ENSCHOG00000013232	-	100	92.453	ENSLAFG00000018248	ARL5C	59	92.453	Loxodonta_africana
ENSCHOG00000013232	-	100	78.302	ENSMAUG00000012845	Arl5c	53	78.302	Mesocricetus_auratus
ENSCHOG00000013232	-	100	87.736	ENSMICG00000002661	ARL5C	59	87.736	Microcebus_murinus
ENSCHOG00000013232	-	100	80.189	ENSMOCG00000000234	Arl5c	63	80.189	Microtus_ochrogaster
ENSCHOG00000013232	-	100	86.792	MGP_CAROLIEiJ_G0017071	Arl5c	59	86.792	Mus_caroli
ENSCHOG00000013232	-	100	86.792	ENSMUSG00000038352	Arl5c	59	86.792	Mus_musculus
ENSCHOG00000013232	-	100	85.849	MGP_PahariEiJ_G0018200	Arl5c	59	85.849	Mus_pahari
ENSCHOG00000013232	-	100	86.792	MGP_SPRETEiJ_G0017917	Arl5c	59	86.792	Mus_spretus
ENSCHOG00000013232	-	100	90.566	ENSMLUG00000030149	ARL5C	59	90.566	Myotis_lucifugus
ENSCHOG00000013232	-	100	86.792	ENSOGAG00000005894	ARL5C	59	86.792	Otolemur_garnettii
ENSCHOG00000013232	-	100	91.509	ENSOARG00000010377	ARL5C	59	91.509	Ovis_aries
ENSCHOG00000013232	-	100	89.623	ENSPPRG00000000975	ARL5C	59	89.623	Panthera_pardus
ENSCHOG00000013232	-	100	88.679	ENSPTIG00000017487	ARL5C	59	88.679	Panthera_tigris_altaica
ENSCHOG00000013232	-	100	85.849	ENSPEMG00000008932	Arl5c	61	85.849	Peromyscus_maniculatus_bairdii
ENSCHOG00000013232	-	100	89.623	ENSPCOG00000028489	ARL5C	59	89.623	Propithecus_coquereli
ENSCHOG00000013232	-	100	89.623	ENSPVAG00000008495	ARL5C	62	89.623	Pteropus_vampyrus
ENSCHOG00000013232	-	100	82.075	ENSRNOG00000036880	Arl5c	59	82.075	Rattus_norvegicus
ENSCHOG00000013232	-	100	73.585	ENSSBOG00000021022	ARL5C	59	73.585	Saimiri_boliviensis_boliviensis
ENSCHOG00000013232	-	100	83.962	ENSSPUG00000007555	ARL5C	65	83.962	Sphenodon_punctatus
ENSCHOG00000013232	-	100	88.679	ENSTBEG00000007274	ARL5C	59	88.679	Tupaia_belangeri
ENSCHOG00000013232	-	100	84.906	ENSUAMG00000012299	ARL5C	59	84.906	Ursus_americanus
ENSCHOG00000013232	-	100	85.849	ENSUMAG00000017197	ARL5C	59	85.849	Ursus_maritimus
ENSCHOG00000013232	-	100	81.132	ENSXETG00000023713	arl5c	55	81.132	Xenopus_tropicalis