EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000013388 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 2418 bases
Position: chrscaffold_17032:52-2469
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011851	zf-RanBP	PF00641.18	2.3e-31	1	4
ENSCHOP00000011851	zf-RanBP	PF00641.18	2.3e-31	2	4
ENSCHOP00000011851	zf-RanBP	PF00641.18	2.3e-31	3	4
ENSCHOP00000011851	zf-RanBP	PF00641.18	2.3e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000013423	-	2385	-	ENSCHOP00000011851	795 (aa)	-	UPI0001FA0CA9

Gene Model

Click here to download ENSCHOG00000013388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000013388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000013388	-	68	79.384	ENSCHOG00000009608	-	65	82.353
ENSCHOG00000013388	-	98	83.746	ENSCHOG00000007137	-	71	83.746
ENSCHOG00000013388	-	100	82.353	ENSCHOG00000008316	-	68	82.353
ENSCHOG00000013388	-	100	82.175	ENSCHOG00000003510	-	68	82.175

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000013388	-	100	65.655	ENSG00000124789	NUP153	57	69.163	Homo_sapiens
ENSCHOG00000013388	-	83	36.921	ENSAPOG00000019495	nup153	50	37.265	Acanthochromis_polyacanthus
ENSCHOG00000013388	-	99	65.836	ENSAMEG00000000721	NUP153	56	67.302	Ailuropoda_melanoleuca
ENSCHOG00000013388	-	91	54.054	ENSACAG00000004118	NUP153	54	55.056	Anolis_carolinensis
ENSCHOG00000013388	-	100	68.429	ENSANAG00000001808	NUP153	58	67.964	Aotus_nancymaae
ENSCHOG00000013388	-	99	65.789	ENSBTAG00000017128	NUP153	59	66.374	Bos_taurus
ENSCHOG00000013388	-	100	67.047	ENSCJAG00000006685	NUP153	59	66.246	Callithrix_jacchus
ENSCHOG00000013388	-	100	67.789	ENSCAFG00000010146	NUP153	63	67.789	Canis_familiaris
ENSCHOG00000013388	-	100	67.789	ENSCAFG00020010901	NUP153	58	67.789	Canis_lupus_dingo
ENSCHOG00000013388	-	100	65.936	ENSCHIG00000023764	NUP153	57	65.300	Capra_hircus
ENSCHOG00000013388	-	100	66.716	ENSTSYG00000001251	NUP153	58	66.716	Carlito_syrichta
ENSCHOG00000013388	-	100	63.220	ENSCPOG00000004007	NUP153	57	63.220	Cavia_porcellus
ENSCHOG00000013388	-	100	67.117	ENSCCAG00000024038	NUP153	61	71.316	Cebus_capucinus
ENSCHOG00000013388	-	100	65.097	ENSCATG00000041429	NUP153	57	69.016	Cercocebus_atys
ENSCHOG00000013388	-	99	64.254	ENSCLAG00000001915	NUP153	58	64.254	Chinchilla_lanigera
ENSCHOG00000013388	-	100	64.901	ENSCSAG00000007624	NUP153	57	68.235	Chlorocebus_sabaeus
ENSCHOG00000013388	-	98	52.915	ENSCPBG00000008333	NUP153	58	53.207	Chrysemys_picta_bellii
ENSCHOG00000013388	-	100	68.576	ENSCANG00000033390	NUP153	59	68.576	Colobus_angolensis_palliatus
ENSCHOG00000013388	-	100	62.590	ENSCGRG00001021016	Nup153	59	62.123	Cricetulus_griseus_chok1gshd
ENSCHOG00000013388	-	100	62.590	ENSCGRG00000009244	Nup153	60	62.123	Cricetulus_griseus_crigri
ENSCHOG00000013388	-	82	38.012	ENSDARG00000099972	nup153	50	37.683	Danio_rerio
ENSCHOG00000013388	-	100	71.953	ENSDNOG00000001153	NUP153	57	71.953	Dasypus_novemcinctus
ENSCHOG00000013388	-	100	67.353	ENSDORG00000001736	Nup153	58	67.353	Dipodomys_ordii
ENSCHOG00000013388	-	100	68.769	ENSEASG00005009945	NUP153	59	68.768	Equus_asinus_asinus
ENSCHOG00000013388	-	100	68.768	ENSECAG00000016010	NUP153	58	68.768	Equus_caballus
ENSCHOG00000013388	-	100	62.647	ENSEEUG00000010183	NUP153	59	63.382	Erinaceus_europaeus
ENSCHOG00000013388	-	100	65.357	ENSFCAG00000011583	NUP153	58	65.357	Felis_catus
ENSCHOG00000013388	-	85	45.674	ENSFALG00000013388	NUP153	62	46.525	Ficedula_albicollis
ENSCHOG00000013388	-	83	36.805	ENSGMOG00000010422	nup153	61	37.803	Gadus_morhua
ENSCHOG00000013388	-	91	55.405	ENSGALG00000012720	NUP153	58	50.146	Gallus_gallus
ENSCHOG00000013388	-	98	52.838	ENSGAGG00000022386	NUP153	58	53.130	Gopherus_agassizii
ENSCHOG00000013388	-	100	65.563	ENSGGOG00000014261	NUP153	56	69.012	Gorilla_gorilla
ENSCHOG00000013388	-	100	65.339	ENSHGLG00000007924	NUP153	57	65.339	Heterocephalus_glaber_female
ENSCHOG00000013388	-	100	65.339	ENSHGLG00100001529	NUP153	57	65.339	Heterocephalus_glaber_male
ENSCHOG00000013388	-	99	66.519	ENSSTOG00000005807	NUP153	66	60.625	Ictidomys_tridecemlineatus
ENSCHOG00000013388	-	98	61.351	ENSJJAG00000016760	Nup153	55	62.356	Jaculus_jaculus
ENSCHOG00000013388	-	90	39.844	ENSLOCG00000008267	nup153	54	46.067	Lepisosteus_oculatus
ENSCHOG00000013388	-	99	68.182	ENSLAFG00000015905	NUP153	57	68.182	Loxodonta_africana
ENSCHOG00000013388	-	100	64.901	ENSMFAG00000045732	NUP153	57	69.016	Macaca_fascicularis
ENSCHOG00000013388	-	100	64.901	ENSMMUG00000001993	NUP153	57	68.869	Macaca_mulatta
ENSCHOG00000013388	-	100	64.901	ENSMNEG00000038011	NUP153	58	68.017	Macaca_nemestrina
ENSCHOG00000013388	-	100	64.901	ENSMLEG00000030776	NUP153	59	68.116	Mandrillus_leucophaeus
ENSCHOG00000013388	-	91	54.054	ENSMGAG00000003139	NUP153	59	49.347	Meleagris_gallopavo
ENSCHOG00000013388	-	100	68.293	ENSMICG00000006089	NUP153	59	68.293	Microcebus_murinus
ENSCHOG00000013388	-	100	61.743	ENSMOCG00000007623	Nup153	57	61.267	Microtus_ochrogaster
ENSCHOG00000013388	-	100	56.277	ENSMODG00000010951	NUP153	65	56.421	Monodelphis_domestica
ENSCHOG00000013388	-	99	61.295	MGP_CAROLIEiJ_G0018483	Nup153	58	62.158	Mus_caroli
ENSCHOG00000013388	-	99	61.871	ENSMUSG00000021374	Nup153	68	65.500	Mus_musculus
ENSCHOG00000013388	-	99	60.465	MGP_PahariEiJ_G0019551	Nup153	58	62.209	Mus_pahari
ENSCHOG00000013388	-	99	61.583	MGP_SPRETEiJ_G0019363	Nup153	58	62.446	Mus_spretus
ENSCHOG00000013388	-	100	61.699	ENSMLUG00000004775	NUP153	59	61.699	Myotis_lucifugus
ENSCHOG00000013388	-	100	64.402	ENSNGAG00000013817	Nup153	57	64.402	Nannospalax_galili
ENSCHOG00000013388	-	100	65.563	ENSNLEG00000001141	NUP153	57	69.457	Nomascus_leucogenys
ENSCHOG00000013388	-	99	60.825	ENSOPRG00000006221	NUP153	56	61.267	Ochotona_princeps
ENSCHOG00000013388	-	96	64.925	ENSODEG00000005620	NUP153	53	66.667	Octodon_degus
ENSCHOG00000013388	-	95	55.132	ENSOANG00000011858	NUP153	55	56.012	Ornithorhynchus_anatinus
ENSCHOG00000013388	-	99	65.000	ENSOCUG00000003064	NUP153	56	65.294	Oryctolagus_cuniculus
ENSCHOG00000013388	-	85	38.577	ENSORLG00000012674	nup153	54	38.295	Oryzias_latipes
ENSCHOG00000013388	-	85	38.199	ENSORLG00020006026	nup153	50	38.570	Oryzias_latipes_hni
ENSCHOG00000013388	-	100	63.254	ENSOGAG00000014899	NUP153	60	63.064	Otolemur_garnettii
ENSCHOG00000013388	-	100	65.268	ENSOARG00000011514	NUP153	59	65.268	Ovis_aries
ENSCHOG00000013388	-	100	65.793	ENSPPAG00000029729	NUP153	57	69.310	Pan_paniscus
ENSCHOG00000013388	-	99	65.793	ENSPPRG00000006160	NUP153	58	65.793	Panthera_pardus
ENSCHOG00000013388	-	99	65.502	ENSPTIG00000017212	NUP153	56	65.502	Panthera_tigris_altaica
ENSCHOG00000013388	-	100	65.931	ENSPTRG00000017752	NUP153	79	69.457	Pan_troglodytes
ENSCHOG00000013388	-	100	64.901	ENSPANG00000015139	NUP153	57	68.576	Papio_anubis
ENSCHOG00000013388	-	97	55.200	ENSPSIG00000017226	NUP153	57	57.600	Pelodiscus_sinensis
ENSCHOG00000013388	-	100	62.787	ENSPEMG00000020772	Nup153	59	63.218	Peromyscus_maniculatus_bairdii
ENSCHOG00000013388	-	82	38.095	ENSPMAG00000002487	-	78	36.893	Petromyzon_marinus
ENSCHOG00000013388	-	100	58.746	ENSPCIG00000029680	NUP153	64	58.163	Phascolarctos_cinereus
ENSCHOG00000013388	-	100	64.611	ENSPPYG00000016259	NUP153	56	64.611	Pongo_abelii
ENSCHOG00000013388	-	100	63.793	ENSPCOG00000014488	NUP153	57	63.793	Propithecus_coquereli
ENSCHOG00000013388	-	100	67.353	ENSPVAG00000012632	NUP153	61	67.353	Pteropus_vampyrus
ENSCHOG00000013388	-	99	61.175	ENSRNOG00000001456	Nup153	58	61.891	Rattus_norvegicus
ENSCHOG00000013388	-	100	67.206	ENSRBIG00000041878	NUP153	56	67.206	Rhinopithecus_bieti
ENSCHOG00000013388	-	100	69.163	ENSRROG00000029849	NUP153	58	68.261	Rhinopithecus_roxellana
ENSCHOG00000013388	-	98	69.750	ENSSBOG00000024532	NUP153	58	69.750	Saimiri_boliviensis_boliviensis
ENSCHOG00000013388	-	74	56.564	ENSSHAG00000016087	-	74	56.240	Sarcophilus_harrisii
ENSCHOG00000013388	-	100	55.523	ENSSARG00000013269	NUP153	59	55.817	Sorex_araneus
ENSCHOG00000013388	-	98	49.708	ENSSPUG00000016687	NUP153	58	51.101	Sphenodon_punctatus
ENSCHOG00000013388	-	100	66.476	ENSSSCG00000026034	NUP153	59	66.476	Sus_scrofa
ENSCHOG00000013388	-	83	46.087	ENSTGUG00000005917	NUP153	60	46.522	Taeniopygia_guttata
ENSCHOG00000013388	-	54	68.977	ENSUAMG00000015215	NUP153	50	67.290	Ursus_americanus
ENSCHOG00000013388	-	99	67.936	ENSUMAG00000017135	NUP153	60	67.143	Ursus_maritimus
ENSCHOG00000013388	-	100	68.722	ENSVPAG00000002072	NUP153	58	68.722	Vicugna_pacos
ENSCHOG00000013388	-	100	67.643	ENSVVUG00000003265	NUP153	63	67.643	Vulpes_vulpes