EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000013540 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 32964 bases
Position: chrGeneScaffold_3258:621-33584
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000011994	tRNA_anti-codon	PF01336.25	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000013586	-	1767	-	ENSCHOP00000011994	588 (aa)	-	UPI0001FA0DD7

Gene Model

Click here to download ENSCHOG00000013540's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000013540's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000013540	-	75	99.772	ENSCHOG00000009454	-	100	99.772

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000013540	-	99	61.499	ENSAPOG00000011658	rpa1	99	60.449	Acanthochromis_polyacanthus
ENSCHOG00000013540	-	90	63.492	ENSAPOG00000019409	RPA1	84	63.492	Acanthochromis_polyacanthus
ENSCHOG00000013540	-	100	88.455	ENSAMEG00000007706	RPA1	95	88.455	Ailuropoda_melanoleuca
ENSCHOG00000013540	-	99	56.973	ENSACIG00000007277	rpa1	99	56.973	Amphilophus_citrinellus
ENSCHOG00000013540	-	99	56.780	ENSACIG00000012881	RPA1	99	56.780	Amphilophus_citrinellus
ENSCHOG00000013540	-	99	53.895	ENSAOCG00000009003	RPA1	96	54.487	Amphiprion_ocellaris
ENSCHOG00000013540	-	99	62.351	ENSAOCG00000023376	rpa1	99	61.897	Amphiprion_ocellaris
ENSCHOG00000013540	-	99	62.181	ENSAPEG00000008634	rpa1	99	61.724	Amphiprion_percula
ENSCHOG00000013540	-	99	53.344	ENSAPEG00000019132	RPA1	96	53.750	Amphiprion_percula
ENSCHOG00000013540	-	99	62.371	ENSATEG00000022024	rpa1	99	62.371	Anabas_testudineus
ENSCHOG00000013540	-	99	55.360	ENSATEG00000006443	RPA1	96	55.360	Anabas_testudineus
ENSCHOG00000013540	-	99	63.444	ENSAPLG00000012442	RPA1	98	63.444	Anas_platyrhynchos
ENSCHOG00000013540	-	99	60.575	ENSACAG00000014490	RPA1	95	61.083	Anolis_carolinensis
ENSCHOG00000013540	-	100	86.054	ENSANAG00000023456	RPA1	98	86.054	Aotus_nancymaae
ENSCHOG00000013540	-	99	56.515	ENSACLG00000005223	RPA1	96	56.515	Astatotilapia_calliptera
ENSCHOG00000013540	-	98	62.892	ENSACLG00000006640	rpa1	99	62.892	Astatotilapia_calliptera
ENSCHOG00000013540	-	99	61.263	ENSAMXG00000008418	rpa1	99	59.727	Astyanax_mexicanus
ENSCHOG00000013540	-	100	89.286	ENSBTAG00000009711	RPA1	95	89.286	Bos_taurus
ENSCHOG00000013540	-	100	86.565	ENSCJAG00000001848	RPA1	95	86.565	Callithrix_jacchus
ENSCHOG00000013540	-	100	87.755	ENSCAFG00000019249	RPA1	95	87.755	Canis_familiaris
ENSCHOG00000013540	-	100	87.755	ENSCAFG00020009847	RPA1	95	87.755	Canis_lupus_dingo
ENSCHOG00000013540	-	100	88.776	ENSCHIG00000026308	RPA1	95	88.776	Capra_hircus
ENSCHOG00000013540	-	100	87.776	ENSTSYG00000003482	-	95	87.776	Carlito_syrichta
ENSCHOG00000013540	-	100	83.503	ENSCPOG00000000035	RPA1	95	83.503	Cavia_porcellus
ENSCHOG00000013540	-	100	75.635	ENSCCAG00000010981	RPA1	95	75.635	Cebus_capucinus
ENSCHOG00000013540	-	100	80.952	ENSCLAG00000015045	-	95	80.952	Chinchilla_lanigera
ENSCHOG00000013540	-	99	85.495	ENSCLAG00000005185	-	95	85.495	Chinchilla_lanigera
ENSCHOG00000013540	-	100	74.958	ENSCSAG00000013833	RPA1	95	75.676	Chlorocebus_sabaeus
ENSCHOG00000013540	-	99	75.468	ENSCPBG00000020377	RPA1	99	75.614	Chrysemys_picta_bellii
ENSCHOG00000013540	-	97	42.440	ENSCING00000023482	-	93	42.440	Ciona_intestinalis
ENSCHOG00000013540	-	100	83.673	ENSCANG00000030911	RPA1	97	83.673	Colobus_angolensis_palliatus
ENSCHOG00000013540	-	99	84.915	ENSCGRG00001008197	Rpa1	95	84.915	Cricetulus_griseus_chok1gshd
ENSCHOG00000013540	-	85	86.759	ENSCGRG00000000582	Rpa1	99	86.759	Cricetulus_griseus_crigri
ENSCHOG00000013540	-	99	59.455	ENSCSEG00000013066	rpa1	97	58.532	Cynoglossus_semilaevis
ENSCHOG00000013540	-	97	52.445	ENSCSEG00000012726	RPA1	98	52.730	Cynoglossus_semilaevis
ENSCHOG00000013540	-	97	52.782	ENSCVAG00000013446	-	93	52.782	Cyprinodon_variegatus
ENSCHOG00000013540	-	99	63.077	ENSCVAG00000019431	rpa1	99	62.148	Cyprinodon_variegatus
ENSCHOG00000013540	-	99	62.692	ENSDARG00000003938	rpa1	95	62.692	Danio_rerio
ENSCHOG00000013540	-	99	93.186	ENSDNOG00000017218	RPA1	95	93.186	Dasypus_novemcinctus
ENSCHOG00000013540	-	100	86.224	ENSDORG00000006199	Rpa1	97	85.304	Dipodomys_ordii
ENSCHOG00000013540	-	99	41.919	FBgn0010173	RpA-70	94	42.470	Drosophila_melanogaster
ENSCHOG00000013540	-	82	87.629	ENSETEG00000017608	RPA1	78	87.629	Echinops_telfairi
ENSCHOG00000013540	-	99	88.547	ENSEASG00005009372	RPA1	98	86.589	Equus_asinus_asinus
ENSCHOG00000013540	-	100	89.116	ENSECAG00000023886	RPA1	95	89.116	Equus_caballus
ENSCHOG00000013540	-	71	91.905	ENSEEUG00000002186	-	68	91.905	Erinaceus_europaeus
ENSCHOG00000013540	-	87	57.700	ENSELUG00000006136	RPA1	96	57.634	Esox_lucius
ENSCHOG00000013540	-	99	60.544	ENSELUG00000021071	rpa1	95	60.611	Esox_lucius
ENSCHOG00000013540	-	100	87.776	ENSFCAG00000006306	RPA1	95	87.776	Felis_catus
ENSCHOG00000013540	-	100	71.574	ENSFALG00000006575	RPA1	95	71.574	Ficedula_albicollis
ENSCHOG00000013540	-	99	86.177	ENSFDAG00000007720	RPA1	95	86.177	Fukomys_damarensis
ENSCHOG00000013540	-	99	61.130	ENSFHEG00000003580	rpa1	95	61.130	Fundulus_heteroclitus
ENSCHOG00000013540	-	99	58.092	ENSGMOG00000010382	rpa1	95	58.092	Gadus_morhua
ENSCHOG00000013540	-	100	72.666	ENSGALG00000003072	RPA1	95	72.666	Gallus_gallus
ENSCHOG00000013540	-	99	53.555	ENSGAFG00000020953	RPA1	96	54.818	Gambusia_affinis
ENSCHOG00000013540	-	99	61.921	ENSGAFG00000012916	rpa1	95	61.921	Gambusia_affinis
ENSCHOG00000013540	-	99	60.818	ENSGACG00000010856	rpa1	95	60.818	Gasterosteus_aculeatus
ENSCHOG00000013540	-	99	75.639	ENSGAGG00000013611	RPA1	95	75.639	Gopherus_agassizii
ENSCHOG00000013540	-	100	84.014	ENSGGOG00000014186	RPA1	95	84.014	Gorilla_gorilla
ENSCHOG00000013540	-	99	62.818	ENSHBUG00000017773	rpa1	95	62.818	Haplochromis_burtoni
ENSCHOG00000013540	-	99	52.196	ENSHBUG00000009348	RPA1	98	52.196	Haplochromis_burtoni
ENSCHOG00000013540	-	99	85.495	ENSHGLG00000008846	RPA1	95	85.495	Heterocephalus_glaber_female
ENSCHOG00000013540	-	99	74.617	ENSHGLG00100002005	-	95	74.617	Heterocephalus_glaber_male
ENSCHOG00000013540	-	100	81.293	ENSHGLG00100000799	-	95	81.293	Heterocephalus_glaber_male
ENSCHOG00000013540	-	99	85.495	ENSHGLG00100017755	-	95	85.495	Heterocephalus_glaber_male
ENSCHOG00000013540	-	99	59.727	ENSHCOG00000001401	rpa1	95	60.237	Hippocampus_comes
ENSCHOG00000013540	-	98	44.905	ENSHCOG00000000351	RPA1	92	44.905	Hippocampus_comes
ENSCHOG00000013540	-	99	61.158	ENSIPUG00000004400	rpa1	95	61.224	Ictalurus_punctatus
ENSCHOG00000013540	-	96	83.158	ENSSTOG00000022475	RPA1	95	83.158	Ictidomys_tridecemlineatus
ENSCHOG00000013540	-	100	86.224	ENSJJAG00000000876	Rpa1	98	86.224	Jaculus_jaculus
ENSCHOG00000013540	-	99	54.975	ENSKMAG00000000234	RPA1	95	54.975	Kryptolebias_marmoratus
ENSCHOG00000013540	-	99	60.136	ENSKMAG00000005605	rpa1	95	60.818	Kryptolebias_marmoratus
ENSCHOG00000013540	-	99	61.840	ENSLBEG00000021604	rpa1	95	61.840	Labrus_bergylta
ENSCHOG00000013540	-	96	63.991	ENSLBEG00000002281	RPA1	83	63.991	Labrus_bergylta
ENSCHOG00000013540	-	85	65.737	ENSLACG00000007210	RPA1	99	65.737	Latimeria_chalumnae
ENSCHOG00000013540	-	99	66.553	ENSLOCG00000006397	rpa1	95	66.553	Lepisosteus_oculatus
ENSCHOG00000013540	-	99	88.235	ENSLAFG00000015354	RPA1	95	88.235	Loxodonta_africana
ENSCHOG00000013540	-	83	86.708	ENSMFAG00000036138	-	97	87.551	Macaca_fascicularis
ENSCHOG00000013540	-	100	86.735	ENSMMUG00000011604	-	97	87.436	Macaca_mulatta
ENSCHOG00000013540	-	100	82.173	ENSMMUG00000002442	-	95	82.173	Macaca_mulatta
ENSCHOG00000013540	-	88	84.989	ENSMNEG00000029837	-	95	84.989	Macaca_nemestrina
ENSCHOG00000013540	-	100	86.224	ENSMNEG00000031632	-	98	86.927	Macaca_nemestrina
ENSCHOG00000013540	-	100	80.880	ENSMLEG00000038768	-	97	81.588	Mandrillus_leucophaeus
ENSCHOG00000013540	-	99	62.075	ENSMAMG00000017993	rpa1	99	60.862	Mastacembelus_armatus
ENSCHOG00000013540	-	99	51.393	ENSMAMG00000020097	RPA1	96	51.548	Mastacembelus_armatus
ENSCHOG00000013540	-	99	56.515	ENSMZEG00005024731	RPA1	96	56.515	Maylandia_zebra
ENSCHOG00000013540	-	99	62.818	ENSMZEG00005007551	rpa1	99	59.622	Maylandia_zebra
ENSCHOG00000013540	-	100	73.005	ENSMGAG00000005315	RPA1	95	73.005	Meleagris_gallopavo
ENSCHOG00000013540	-	99	86.325	ENSMAUG00000010474	Rpa1	97	86.325	Mesocricetus_auratus
ENSCHOG00000013540	-	100	88.265	ENSMICG00000012867	RPA1	95	88.265	Microcebus_murinus
ENSCHOG00000013540	-	99	84.957	ENSMOCG00000013019	Rpa1	95	84.957	Microtus_ochrogaster
ENSCHOG00000013540	-	99	55.973	ENSMMOG00000010868	RPA1	95	55.973	Mola_mola
ENSCHOG00000013540	-	99	61.670	ENSMMOG00000014292	rpa1	99	61.670	Mola_mola
ENSCHOG00000013540	-	99	82.594	ENSMODG00000010549	RPA1	95	82.594	Monodelphis_domestica
ENSCHOG00000013540	-	93	63.781	ENSMALG00000001208	RPA1	78	63.781	Monopterus_albus
ENSCHOG00000013540	-	99	62.671	ENSMALG00000011453	rpa1	95	62.842	Monopterus_albus
ENSCHOG00000013540	-	99	84.014	MGP_CAROLIEiJ_G0016734	Rpa1	95	84.014	Mus_caroli
ENSCHOG00000013540	-	99	82.997	ENSMUSG00000000751	Rpa1	95	82.997	Mus_musculus
ENSCHOG00000013540	-	99	85.110	MGP_PahariEiJ_G0017871	Rpa1	95	85.110	Mus_pahari
ENSCHOG00000013540	-	99	83.025	MGP_SPRETEiJ_G0017577	Rpa1	95	83.025	Mus_spretus
ENSCHOG00000013540	-	100	87.415	ENSMPUG00000013119	RPA1	95	87.415	Mustela_putorius_furo
ENSCHOG00000013540	-	100	86.735	ENSMLUG00000006113	RPA1	95	86.735	Myotis_lucifugus
ENSCHOG00000013540	-	100	85.399	ENSNGAG00000004522	Rpa1	94	85.399	Nannospalax_galili
ENSCHOG00000013540	-	99	54.778	ENSNBRG00000009672	RPA1	94	54.778	Neolamprologus_brichardi
ENSCHOG00000013540	-	98	62.694	ENSNBRG00000020595	rpa1	99	62.694	Neolamprologus_brichardi
ENSCHOG00000013540	-	100	86.224	ENSNLEG00000017149	RPA1	95	86.224	Nomascus_leucogenys
ENSCHOG00000013540	-	100	70.748	ENSMEUG00000006714	RPA1	97	70.748	Notamacropus_eugenii
ENSCHOG00000013540	-	100	82.747	ENSODEG00000009038	RPA1	96	82.747	Octodon_degus
ENSCHOG00000013540	-	99	63.025	ENSONIG00000013135	rpa1	95	63.025	Oreochromis_niloticus
ENSCHOG00000013540	-	99	81.293	ENSOANG00000010880	RPA1	97	81.633	Ornithorhynchus_anatinus
ENSCHOG00000013540	-	100	83.819	ENSOCUG00000001504	RPA1	96	83.819	Oryctolagus_cuniculus
ENSCHOG00000013540	-	99	54.603	ENSORLG00000003368	RPA1	96	54.603	Oryzias_latipes
ENSCHOG00000013540	-	99	62.245	ENSORLG00000004856	rpa1	96	62.245	Oryzias_latipes
ENSCHOG00000013540	-	99	53.115	ENSORLG00020015284	RPA1	96	53.115	Oryzias_latipes_hni
ENSCHOG00000013540	-	99	62.415	ENSORLG00020008980	rpa1	96	62.415	Oryzias_latipes_hni
ENSCHOG00000013540	-	99	62.415	ENSORLG00015013982	rpa1	96	62.415	Oryzias_latipes_hsok
ENSCHOG00000013540	-	99	54.369	ENSORLG00015020383	RPA1	96	54.369	Oryzias_latipes_hsok
ENSCHOG00000013540	-	70	63.043	ENSORLG00015005867	-	94	63.043	Oryzias_latipes_hsok
ENSCHOG00000013540	-	99	55.308	ENSOMEG00000011040	RPA1	99	55.308	Oryzias_melastigma
ENSCHOG00000013540	-	99	60.034	ENSOMEG00000004704	rpa1	96	60.034	Oryzias_melastigma
ENSCHOG00000013540	-	94	81.323	ENSOGAG00000029379	-	94	91.534	Otolemur_garnettii
ENSCHOG00000013540	-	100	87.075	ENSOGAG00000005581	-	95	87.075	Otolemur_garnettii
ENSCHOG00000013540	-	100	88.605	ENSOARG00000014479	RPA1	95	88.605	Ovis_aries
ENSCHOG00000013540	-	100	86.565	ENSPPAG00000039680	RPA1	95	86.565	Pan_paniscus
ENSCHOG00000013540	-	100	87.606	ENSPPRG00000011807	RPA1	95	87.606	Panthera_pardus
ENSCHOG00000013540	-	100	87.267	ENSPTIG00000007898	RPA1	95	87.267	Panthera_tigris_altaica
ENSCHOG00000013540	-	100	86.565	ENSPTRG00000008539	RPA1	95	86.565	Pan_troglodytes
ENSCHOG00000013540	-	100	86.735	ENSPANG00000024592	RPA1	95	87.436	Papio_anubis
ENSCHOG00000013540	-	94	61.261	ENSPKIG00000008053	rpa1	90	62.230	Paramormyrops_kingsleyae
ENSCHOG00000013540	-	99	75.170	ENSPSIG00000015617	RPA1	97	75.170	Pelodiscus_sinensis
ENSCHOG00000013540	-	98	54.231	ENSPMGG00000000543	RPA1	99	55.712	Periophthalmus_magnuspinnatus
ENSCHOG00000013540	-	99	61.263	ENSPMGG00000011589	rpa1	98	61.433	Periophthalmus_magnuspinnatus
ENSCHOG00000013540	-	99	85.470	ENSPEMG00000021061	Rpa1	95	85.470	Peromyscus_maniculatus_bairdii
ENSCHOG00000013540	-	100	80.475	ENSPCIG00000019049	RPA1	95	80.711	Phascolarctos_cinereus
ENSCHOG00000013540	-	99	62.393	ENSPFOG00000003987	rpa1	95	62.393	Poecilia_formosa
ENSCHOG00000013540	-	94	54.132	ENSPLAG00000008844	-	93	54.132	Poecilia_latipinna
ENSCHOG00000013540	-	99	62.051	ENSPLAG00000004984	rpa1	95	62.051	Poecilia_latipinna
ENSCHOG00000013540	-	99	62.564	ENSPMEG00000020602	rpa1	99	61.672	Poecilia_mexicana
ENSCHOG00000013540	-	94	54.132	ENSPMEG00000003627	-	92	55.051	Poecilia_mexicana
ENSCHOG00000013540	-	94	55.396	ENSPREG00000010174	rpa1	92	55.216	Poecilia_reticulata
ENSCHOG00000013540	-	99	52.308	ENSPREG00000010119	RPA1	96	52.308	Poecilia_reticulata
ENSCHOG00000013540	-	100	88.265	ENSPCOG00000001799	RPA1	95	88.265	Propithecus_coquereli
ENSCHOG00000013540	-	100	87.925	ENSPVAG00000002149	RPA1	95	87.925	Pteropus_vampyrus
ENSCHOG00000013540	-	99	62.988	ENSPNYG00000016316	rpa1	99	62.847	Pundamilia_nyererei
ENSCHOG00000013540	-	99	56.352	ENSPNYG00000024165	RPA1	96	56.352	Pundamilia_nyererei
ENSCHOG00000013540	-	99	53.663	ENSPNAG00000008599	rpa1	96	54.639	Pygocentrus_nattereri
ENSCHOG00000013540	-	99	85.990	ENSRNOG00000003123	Rpa1	95	85.299	Rattus_norvegicus
ENSCHOG00000013540	-	100	87.436	ENSRBIG00000036587	RPA1	95	87.436	Rhinopithecus_bieti
ENSCHOG00000013540	-	100	82.003	ENSRROG00000043278	RPA1	95	82.003	Rhinopithecus_roxellana
ENSCHOG00000013540	-	71	38.588	YAR007C	RFA1	68	38.588	Saccharomyces_cerevisiae
ENSCHOG00000013540	-	95	86.096	ENSSBOG00000030233	RPA1	97	86.096	Saimiri_boliviensis_boliviensis
ENSCHOG00000013540	-	99	82.143	ENSSHAG00000007969	RPA1	95	82.313	Sarcophilus_harrisii
ENSCHOG00000013540	-	99	64.726	ENSSFOG00015005362	rpa1	88	64.726	Scleropages_formosus
ENSCHOG00000013540	-	99	51.654	ENSSMAG00000019746	RPA1	96	51.567	Scophthalmus_maximus
ENSCHOG00000013540	-	99	63.435	ENSSDUG00000011949	rpa1	96	63.435	Seriola_dumerili
ENSCHOG00000013540	-	89	66.282	ENSSDUG00000016358	RPA1	81	65.682	Seriola_dumerili
ENSCHOG00000013540	-	89	66.125	ENSSLDG00000020784	RPA1	80	65.525	Seriola_lalandi_dorsalis
ENSCHOG00000013540	-	99	63.605	ENSSLDG00000011806	rpa1	96	63.605	Seriola_lalandi_dorsalis
ENSCHOG00000013540	-	100	66.497	ENSSARG00000007506	RPA1	97	66.497	Sorex_araneus
ENSCHOG00000013540	-	99	70.358	ENSSPUG00000007223	RPA1	97	70.358	Sphenodon_punctatus
ENSCHOG00000013540	-	99	61.840	ENSSPAG00000009903	rpa1	95	61.840	Stegastes_partitus
ENSCHOG00000013540	-	99	57.095	ENSSPAG00000011165	RPA1	97	56.876	Stegastes_partitus
ENSCHOG00000013540	-	100	88.605	ENSSSCG00000017822	RPA1	98	88.605	Sus_scrofa
ENSCHOG00000013540	-	100	71.138	ENSTGUG00000005775	RPA1	95	71.138	Taeniopygia_guttata
ENSCHOG00000013540	-	99	63.032	ENSTRUG00000003616	rpa1	96	63.032	Takifugu_rubripes
ENSCHOG00000013540	-	90	64.019	ENSTRUG00000000405	RPA1	78	61.438	Takifugu_rubripes
ENSCHOG00000013540	-	99	63.220	ENSTNIG00000016199	rpa1	95	63.220	Tetraodon_nigroviridis
ENSCHOG00000013540	-	88	100.000	ENSTBEG00000002709	RPA1	86	100.000	Tupaia_belangeri
ENSCHOG00000013540	-	99	88.055	ENSTTRG00000001169	RPA1	95	88.055	Tursiops_truncatus
ENSCHOG00000013540	-	90	98.077	ENSUAMG00000015676	RPA1	94	98.077	Ursus_americanus
ENSCHOG00000013540	-	100	88.605	ENSUMAG00000009328	RPA1	95	88.605	Ursus_maritimus
ENSCHOG00000013540	-	100	86.565	ENSVPAG00000009443	RPA1	96	86.565	Vicugna_pacos
ENSCHOG00000013540	-	100	87.925	ENSVVUG00000021715	RPA1	95	87.925	Vulpes_vulpes
ENSCHOG00000013540	-	99	70.470	ENSXETG00000013538	rpa1	95	72.014	Xenopus_tropicalis
ENSCHOG00000013540	-	99	55.385	ENSXCOG00000009899	-	99	55.385	Xiphophorus_couchianus
ENSCHOG00000013540	-	94	60.107	ENSXCOG00000010068	rpa1	94	60.107	Xiphophorus_couchianus
ENSCHOG00000013540	-	99	60.714	ENSXMAG00000004102	rpa1	99	61.014	Xiphophorus_maculatus
ENSCHOG00000013540	-	90	64.318	ENSXMAG00000010333	RPA1	82	64.318	Xiphophorus_maculatus