EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000013725 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 5002 bases
Position: chrGeneScaffold_3124:6997-11998
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000012140	Methyltr_RsmB-F	PF01189.17	3.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000013759	-	957	-	ENSCHOP00000012140	318 (aa)	-	UPI0001FA0ED2

Gene Model

Click here to download ENSCHOG00000013725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000013725's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000013725	-	99	68.438	ENSG00000130305	NSUN5	72	70.318	Homo_sapiens
ENSCHOG00000013725	-	86	48.375	ENSAPOG00000016848	nsun5	63	48.375	Acanthochromis_polyacanthus
ENSCHOG00000013725	-	93	70.470	ENSAMEG00000011119	NSUN5	68	69.182	Ailuropoda_melanoleuca
ENSCHOG00000013725	-	98	44.268	ENSACIG00000001153	nsun5	69	42.690	Amphilophus_citrinellus
ENSCHOG00000013725	-	86	47.826	ENSAOCG00000019331	nsun5	55	47.826	Amphiprion_ocellaris
ENSCHOG00000013725	-	86	47.826	ENSAPEG00000013003	nsun5	55	47.826	Amphiprion_percula
ENSCHOG00000013725	-	97	45.541	ENSATEG00000010576	nsun5	55	48.746	Anabas_testudineus
ENSCHOG00000013725	-	81	49.231	ENSAPLG00000008049	NSUN5	89	48.235	Anas_platyrhynchos
ENSCHOG00000013725	-	94	48.344	ENSACAG00000000193	NSUN5	68	48.089	Anolis_carolinensis
ENSCHOG00000013725	-	99	68.025	ENSANAG00000029059	NSUN5	68	68.025	Aotus_nancymaae
ENSCHOG00000013725	-	89	48.951	ENSACLG00000021086	nsun5	57	48.951	Astatotilapia_calliptera
ENSCHOG00000013725	-	89	47.368	ENSAMXG00000016626	nsun5	68	45.277	Astyanax_mexicanus
ENSCHOG00000013725	-	93	68.562	ENSBTAG00000017941	NSUN5	69	67.823	Bos_taurus
ENSCHOG00000013725	-	79	35.798	WBGene00013151	nsun-5	83	36.555	Caenorhabditis_elegans
ENSCHOG00000013725	-	99	67.085	ENSCJAG00000016968	NSUN5	68	67.085	Callithrix_jacchus
ENSCHOG00000013725	-	91	71.233	ENSCAFG00000013197	NSUN5	67	68.553	Canis_familiaris
ENSCHOG00000013725	-	91	71.575	ENSCAFG00020012547	NSUN5	67	68.868	Canis_lupus_dingo
ENSCHOG00000013725	-	99	68.454	ENSCHIG00000012082	NSUN5	69	68.454	Capra_hircus
ENSCHOG00000013725	-	100	69.159	ENSTSYG00000036549	NSUN5	72	69.470	Carlito_syrichta
ENSCHOG00000013725	-	97	65.176	ENSCAPG00000013989	NSUN5	80	65.176	Cavia_aperea
ENSCHOG00000013725	-	97	64.537	ENSCPOG00000023149	NSUN5	68	64.537	Cavia_porcellus
ENSCHOG00000013725	-	99	68.025	ENSCCAG00000021042	NSUN5	68	68.025	Cebus_capucinus
ENSCHOG00000013725	-	99	68.438	ENSCATG00000015253	NSUN5	69	68.438	Cercocebus_atys
ENSCHOG00000013725	-	91	68.041	ENSCLAG00000005624	NSUN5	66	66.032	Chinchilla_lanigera
ENSCHOG00000013725	-	99	67.188	ENSCSAG00000018161	NSUN5	69	67.188	Chlorocebus_sabaeus
ENSCHOG00000013725	-	87	54.804	ENSCPBG00000009699	NSUN5	67	54.804	Chrysemys_picta_bellii
ENSCHOG00000013725	-	77	38.800	ENSCING00000023888	-	56	37.975	Ciona_intestinalis
ENSCHOG00000013725	-	84	33.577	ENSCSAVG00000006814	-	58	34.483	Ciona_savignyi
ENSCHOG00000013725	-	99	67.500	ENSCANG00000043217	NSUN5	69	67.500	Colobus_angolensis_palliatus
ENSCHOG00000013725	-	88	67.730	ENSCGRG00001006270	Nsun5	68	63.438	Cricetulus_griseus_chok1gshd
ENSCHOG00000013725	-	88	67.376	ENSCGRG00000006943	Nsun5	79	63.125	Cricetulus_griseus_crigri
ENSCHOG00000013725	-	90	47.569	ENSCSEG00000000376	nsun5	66	48.276	Cynoglossus_semilaevis
ENSCHOG00000013725	-	89	47.368	ENSCVAG00000001813	nsun5	56	47.368	Cyprinodon_variegatus
ENSCHOG00000013725	-	86	47.826	ENSDARG00000043209	nsun5	81	47.826	Danio_rerio
ENSCHOG00000013725	-	99	74.062	ENSDNOG00000000305	NSUN5	69	74.062	Dasypus_novemcinctus
ENSCHOG00000013725	-	91	66.894	ENSDORG00000010530	Nsun5	68	65.528	Dipodomys_ordii
ENSCHOG00000013725	-	91	69.416	ENSETEG00000000934	NSUN5	78	67.081	Echinops_telfairi
ENSCHOG00000013725	-	66	63.542	ENSEBUG00000006181	nsun5	52	63.542	Eptatretus_burgeri
ENSCHOG00000013725	-	99	72.500	ENSEASG00005016116	NSUN5	69	72.500	Equus_asinus_asinus
ENSCHOG00000013725	-	99	73.125	ENSECAG00000012138	NSUN5	69	73.125	Equus_caballus
ENSCHOG00000013725	-	89	66.316	ENSEEUG00000004861	NSUN5	62	66.316	Erinaceus_europaeus
ENSCHOG00000013725	-	92	47.635	ENSELUG00000013971	nsun5	53	47.635	Esox_lucius
ENSCHOG00000013725	-	89	71.777	ENSFCAG00000012667	NSUN5	66	68.690	Felis_catus
ENSCHOG00000013725	-	87	53.571	ENSFALG00000013697	NSUN5	69	50.479	Ficedula_albicollis
ENSCHOG00000013725	-	91	67.918	ENSFDAG00000009683	NSUN5	69	66.246	Fukomys_damarensis
ENSCHOG00000013725	-	89	46.127	ENSFHEG00000022931	nsun5	57	46.127	Fundulus_heteroclitus
ENSCHOG00000013725	-	86	49.640	ENSGMOG00000005869	nsun5	65	49.640	Gadus_morhua
ENSCHOG00000013725	-	97	48.896	ENSGALG00000000891	NSUN5	68	49.051	Gallus_gallus
ENSCHOG00000013725	-	86	48.188	ENSGAFG00000019082	nsun5	55	48.188	Gambusia_affinis
ENSCHOG00000013725	-	90	46.735	ENSGACG00000006042	nsun5	65	46.735	Gasterosteus_aculeatus
ENSCHOG00000013725	-	98	51.111	ENSGAGG00000017057	NSUN5	75	51.111	Gopherus_agassizii
ENSCHOG00000013725	-	99	67.188	ENSGGOG00000011730	-	68	67.188	Gorilla_gorilla
ENSCHOG00000013725	-	99	68.125	ENSGGOG00000043878	-	69	68.125	Gorilla_gorilla
ENSCHOG00000013725	-	89	48.951	ENSHBUG00000007202	nsun5	57	48.951	Haplochromis_burtoni
ENSCHOG00000013725	-	91	69.283	ENSHGLG00000018321	NSUN5	69	67.192	Heterocephalus_glaber_female
ENSCHOG00000013725	-	91	69.283	ENSHGLG00100003118	NSUN5	70	67.192	Heterocephalus_glaber_male
ENSCHOG00000013725	-	86	48.188	ENSHCOG00000002678	nsun5	63	48.188	Hippocampus_comes
ENSCHOG00000013725	-	92	46.284	ENSIPUG00000009246	NSUN5	69	43.243	Ictalurus_punctatus
ENSCHOG00000013725	-	93	67.893	ENSSTOG00000015023	NSUN5	72	67.419	Ictidomys_tridecemlineatus
ENSCHOG00000013725	-	91	67.698	ENSJJAG00000012146	Nsun5	67	65.495	Jaculus_jaculus
ENSCHOG00000013725	-	89	46.528	ENSKMAG00000011806	nsun5	64	47.719	Kryptolebias_marmoratus
ENSCHOG00000013725	-	86	48.375	ENSLBEG00000007743	nsun5	70	41.926	Labrus_bergylta
ENSCHOG00000013725	-	86	50.719	ENSLACG00000018926	NSUN5	58	50.719	Latimeria_chalumnae
ENSCHOG00000013725	-	86	50.362	ENSLOCG00000001105	nsun5	56	50.362	Lepisosteus_oculatus
ENSCHOG00000013725	-	99	69.375	ENSLAFG00000017255	NSUN5	69	69.375	Loxodonta_africana
ENSCHOG00000013725	-	96	66.234	ENSMFAG00000037773	NSUN5	66	66.234	Macaca_fascicularis
ENSCHOG00000013725	-	99	68.125	ENSMMUG00000022776	NSUN5	69	68.125	Macaca_mulatta
ENSCHOG00000013725	-	99	68.125	ENSMNEG00000032761	NSUN5	69	68.125	Macaca_nemestrina
ENSCHOG00000013725	-	99	68.125	ENSMLEG00000033115	NSUN5	69	68.125	Mandrillus_leucophaeus
ENSCHOG00000013725	-	89	48.252	ENSMAMG00000017048	nsun5	54	48.252	Mastacembelus_armatus
ENSCHOG00000013725	-	89	48.951	ENSMZEG00005020689	nsun5	57	48.951	Maylandia_zebra
ENSCHOG00000013725	-	98	50.617	ENSMGAG00000001654	NSUN5	94	50.617	Meleagris_gallopavo
ENSCHOG00000013725	-	91	66.327	ENSMAUG00000019013	Nsun5	68	64.062	Mesocricetus_auratus
ENSCHOG00000013725	-	93	71.237	ENSMICG00000035469	NSUN5	68	70.978	Microcebus_murinus
ENSCHOG00000013725	-	89	67.368	ENSMOCG00000021028	Nsun5	68	63.323	Microtus_ochrogaster
ENSCHOG00000013725	-	97	44.762	ENSMMOG00000021664	nsun5	85	47.687	Mola_mola
ENSCHOG00000013725	-	94	62.126	ENSMODG00000013753	NSUN5	68	61.935	Monodelphis_domestica
ENSCHOG00000013725	-	89	47.552	ENSMALG00000003855	nsun5	57	47.552	Monopterus_albus
ENSCHOG00000013725	-	90	67.820	MGP_CAROLIEiJ_G0027835	Nsun5	68	65.094	Mus_caroli
ENSCHOG00000013725	-	99	63.836	ENSMUSG00000000916	Nsun5	68	63.836	Mus_musculus
ENSCHOG00000013725	-	90	67.128	MGP_PahariEiJ_G0024415	Nsun5	68	64.151	Mus_pahari
ENSCHOG00000013725	-	99	63.522	MGP_SPRETEiJ_G0028834	Nsun5	68	63.522	Mus_spretus
ENSCHOG00000013725	-	91	68.729	ENSMPUG00000016038	NSUN5	66	66.349	Mustela_putorius_furo
ENSCHOG00000013725	-	99	70.497	ENSMLUG00000008380	NSUN5	69	70.497	Myotis_lucifugus
ENSCHOG00000013725	-	99	65.517	ENSNGAG00000015157	Nsun5	68	65.517	Nannospalax_galili
ENSCHOG00000013725	-	89	48.252	ENSNBRG00000001723	nsun5	57	48.252	Neolamprologus_brichardi
ENSCHOG00000013725	-	93	65.552	ENSNLEG00000015518	-	78	62.696	Nomascus_leucogenys
ENSCHOG00000013725	-	99	59.077	ENSNLEG00000008648	-	67	59.077	Nomascus_leucogenys
ENSCHOG00000013725	-	88	59.364	ENSMEUG00000012463	NSUN5	66	59.364	Notamacropus_eugenii
ENSCHOG00000013725	-	87	66.548	ENSOPRG00000006191	NSUN5	67	63.208	Ochotona_princeps
ENSCHOG00000013725	-	98	64.127	ENSODEG00000015132	NSUN5	65	64.127	Octodon_degus
ENSCHOG00000013725	-	92	47.279	ENSONIG00000001912	nsun5	59	47.279	Oreochromis_niloticus
ENSCHOG00000013725	-	92	62.712	ENSOANG00000014405	-	71	60.759	Ornithorhynchus_anatinus
ENSCHOG00000013725	-	86	49.455	ENSORLG00000003480	nsun5	57	49.455	Oryzias_latipes
ENSCHOG00000013725	-	86	49.091	ENSORLG00020017611	nsun5	56	49.091	Oryzias_latipes_hni
ENSCHOG00000013725	-	86	50.000	ENSOMEG00000006110	nsun5	56	50.000	Oryzias_melastigma
ENSCHOG00000013725	-	96	71.197	ENSOGAG00000002362	NSUN5	69	70.000	Otolemur_garnettii
ENSCHOG00000013725	-	97	68.387	ENSOARG00000012934	NSUN5	71	68.387	Ovis_aries
ENSCHOG00000013725	-	93	64.000	ENSPPAG00000037296	NSUN5	71	68.498	Pan_paniscus
ENSCHOG00000013725	-	89	71.329	ENSPPRG00000014831	NSUN5	63	68.051	Panthera_pardus
ENSCHOG00000013725	-	97	63.782	ENSPTRG00000042795	-	70	63.782	Pan_troglodytes
ENSCHOG00000013725	-	99	68.438	ENSPTRG00000045195	-	69	68.438	Pan_troglodytes
ENSCHOG00000013725	-	97	65.806	ENSPTRG00000019268	NSUN5	66	65.806	Pan_troglodytes
ENSCHOG00000013725	-	97	63.462	ENSPTRG00000046760	-	70	63.462	Pan_troglodytes
ENSCHOG00000013725	-	99	68.438	ENSPANG00000018605	NSUN5	69	68.438	Papio_anubis
ENSCHOG00000013725	-	86	50.903	ENSPKIG00000010935	nsun5	57	50.903	Paramormyrops_kingsleyae
ENSCHOG00000013725	-	95	51.456	ENSPSIG00000007787	NSUN5	77	51.456	Pelodiscus_sinensis
ENSCHOG00000013725	-	93	44.631	ENSPMGG00000000744	nsun5	88	45.296	Periophthalmus_magnuspinnatus
ENSCHOG00000013725	-	91	66.327	ENSPEMG00000010466	Nsun5	68	63.750	Peromyscus_maniculatus_bairdii
ENSCHOG00000013725	-	95	61.184	ENSPCIG00000023276	NSUN5	66	61.873	Phascolarctos_cinereus
ENSCHOG00000013725	-	86	49.275	ENSPFOG00000006001	nsun5	55	49.275	Poecilia_formosa
ENSCHOG00000013725	-	86	48.913	ENSPLAG00000009355	nsun5	55	48.913	Poecilia_latipinna
ENSCHOG00000013725	-	86	49.638	ENSPMEG00000006237	nsun5	55	49.638	Poecilia_mexicana
ENSCHOG00000013725	-	86	48.551	ENSPREG00000000892	nsun5	64	48.551	Poecilia_reticulata
ENSCHOG00000013725	-	81	65.517	ENSPPYG00000017479	-	99	64.430	Pongo_abelii
ENSCHOG00000013725	-	72	63.830	ENSPPYG00000017508	-	61	63.830	Pongo_abelii
ENSCHOG00000013725	-	84	59.273	ENSPCAG00000010802	-	92	58.519	Procavia_capensis
ENSCHOG00000013725	-	99	71.473	ENSPCOG00000026928	NSUN5	68	71.473	Propithecus_coquereli
ENSCHOG00000013725	-	100	71.340	ENSPVAG00000012102	NSUN5	69	71.340	Pteropus_vampyrus
ENSCHOG00000013725	-	89	48.601	ENSPNYG00000009412	nsun5	57	48.601	Pundamilia_nyererei
ENSCHOG00000013725	-	88	46.263	ENSPNAG00000005627	nsun5	58	46.263	Pygocentrus_nattereri
ENSCHOG00000013725	-	96	66.129	ENSRNOG00000001450	Nsun5	68	66.129	Rattus_norvegicus
ENSCHOG00000013725	-	99	68.125	ENSRBIG00000031049	NSUN5	69	68.125	Rhinopithecus_bieti
ENSCHOG00000013725	-	99	68.438	ENSRROG00000041917	NSUN5	69	68.438	Rhinopithecus_roxellana
ENSCHOG00000013725	-	87	69.395	ENSSBOG00000028211	NSUN5	85	69.395	Saimiri_boliviensis_boliviensis
ENSCHOG00000013725	-	86	57.401	ENSSHAG00000015172	NSUN5	66	55.340	Sarcophilus_harrisii
ENSCHOG00000013725	-	86	48.188	ENSSFOG00015004641	nsun5	57	48.188	Scleropages_formosus
ENSCHOG00000013725	-	86	47.653	ENSSMAG00000014614	nsun5	55	47.653	Scophthalmus_maximus
ENSCHOG00000013725	-	89	48.252	ENSSDUG00000015935	nsun5	62	49.275	Seriola_dumerili
ENSCHOG00000013725	-	98	45.399	ENSSLDG00000023045	nsun5	66	47.222	Seriola_lalandi_dorsalis
ENSCHOG00000013725	-	87	53.929	ENSSPUG00000000580	NSUN5	73	53.929	Sphenodon_punctatus
ENSCHOG00000013725	-	89	45.965	ENSSPAG00000002242	nsun5	57	45.965	Stegastes_partitus
ENSCHOG00000013725	-	91	70.447	ENSSSCG00000007704	NSUN5	68	68.239	Sus_scrofa
ENSCHOG00000013725	-	87	53.929	ENSTGUG00000003110	NSUN5	68	50.000	Taeniopygia_guttata
ENSCHOG00000013725	-	86	47.331	ENSTRUG00000017748	nsun5	55	47.331	Takifugu_rubripes
ENSCHOG00000013725	-	89	47.387	ENSTNIG00000012017	nsun5	60	46.465	Tetraodon_nigroviridis
ENSCHOG00000013725	-	93	70.470	ENSUAMG00000016585	NSUN5	65	69.182	Ursus_americanus
ENSCHOG00000013725	-	52	69.880	ENSVPAG00000007305	NSUN5	59	68.072	Vicugna_pacos
ENSCHOG00000013725	-	91	71.918	ENSVVUG00000024659	NSUN5	67	69.497	Vulpes_vulpes
ENSCHOG00000013725	-	87	45.423	ENSXETG00000010332	nsun5	58	45.423	Xenopus_tropicalis
ENSCHOG00000013725	-	86	48.913	ENSXCOG00000003176	nsun5	56	48.913	Xiphophorus_couchianus
ENSCHOG00000013725	-	86	49.275	ENSXMAG00000019220	nsun5	55	49.275	Xiphophorus_maculatus