EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHOG00000013886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Plus strand
Length: 589 bases
Position: chrscaffold_95546:952-1540
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000012295	RRM_1	PF00076.22	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000013923	-	357	-	ENSCHOP00000012295	118 (aa)	-	UPI0001FA0D4D

Gene Model

Click here to download ENSCHOG00000013886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000013886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHOG00000013886	-	73	30.337	ENSCHOG00000004836	-	60	30.337
ENSCHOG00000013886	-	73	30.337	ENSCHOG00000007773	-	53	30.337
ENSCHOG00000013886	-	99	74.194	ENSCHOG00000000689	SF3B6	99	74.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000013886	-	99	74.194	ENSG00000115128	SF3B6	99	74.194	Homo_sapiens
ENSCHOG00000013886	-	99	72.581	ENSAPOG00000023788	sf3b6	99	72.581	Acanthochromis_polyacanthus
ENSCHOG00000013886	-	99	74.194	ENSAMEG00000002786	SF3B6	99	74.194	Ailuropoda_melanoleuca
ENSCHOG00000013886	-	99	72.581	ENSACIG00000012608	sf3b6	99	72.581	Amphilophus_citrinellus
ENSCHOG00000013886	-	99	72.581	ENSAOCG00000013394	sf3b6	99	72.581	Amphiprion_ocellaris
ENSCHOG00000013886	-	99	72.581	ENSAPEG00000015311	sf3b6	99	72.581	Amphiprion_percula
ENSCHOG00000013886	-	99	72.581	ENSATEG00000016569	sf3b6	99	72.581	Anabas_testudineus
ENSCHOG00000013886	-	99	74.194	ENSACAG00000011677	SF3B6	99	74.194	Anolis_carolinensis
ENSCHOG00000013886	-	99	74.194	ENSANAG00000027284	SF3B6	95	74.194	Aotus_nancymaae
ENSCHOG00000013886	-	99	72.581	ENSACLG00000007793	sf3b6	99	72.581	Astatotilapia_calliptera
ENSCHOG00000013886	-	99	74.194	ENSAMXG00000034888	sf3b6	99	74.194	Astyanax_mexicanus
ENSCHOG00000013886	-	99	74.194	ENSBTAG00000003407	SF3B6	99	74.194	Bos_taurus
ENSCHOG00000013886	-	99	73.387	ENSBTAG00000049128	-	99	73.387	Bos_taurus
ENSCHOG00000013886	-	72	72.941	WBGene00016808	C50D2.5	62	72.941	Caenorhabditis_elegans
ENSCHOG00000013886	-	99	74.194	ENSCJAG00000007716	SF3B6	99	74.194	Callithrix_jacchus
ENSCHOG00000013886	-	99	74.194	ENSCAFG00000003957	SF3B6	99	74.194	Canis_familiaris
ENSCHOG00000013886	-	99	74.194	ENSCAFG00020025576	SF3B6	99	74.194	Canis_lupus_dingo
ENSCHOG00000013886	-	99	74.194	ENSCHIG00000009902	SF3B6	99	74.194	Capra_hircus
ENSCHOG00000013886	-	99	74.194	ENSTSYG00000013978	SF3B6	99	74.194	Carlito_syrichta
ENSCHOG00000013886	-	93	75.214	ENSCAPG00000016302	SF3B6	96	75.214	Cavia_aperea
ENSCHOG00000013886	-	99	74.194	ENSCPOG00000008016	SF3B6	99	74.194	Cavia_porcellus
ENSCHOG00000013886	-	81	83.158	ENSCCAG00000018894	-	74	83.158	Cebus_capucinus
ENSCHOG00000013886	-	99	74.194	ENSCCAG00000036653	SF3B6	99	74.194	Cebus_capucinus
ENSCHOG00000013886	-	99	74.194	ENSCATG00000030936	SF3B6	99	74.194	Cercocebus_atys
ENSCHOG00000013886	-	99	74.194	ENSCLAG00000014512	SF3B6	98	75.630	Chinchilla_lanigera
ENSCHOG00000013886	-	99	74.194	ENSCSAG00000008390	SF3B6	99	74.194	Chlorocebus_sabaeus
ENSCHOG00000013886	-	99	74.194	ENSCPBG00000020042	SF3B6	99	74.194	Chrysemys_picta_bellii
ENSCHOG00000013886	-	97	61.475	ENSCING00000012689	-	96	61.475	Ciona_intestinalis
ENSCHOG00000013886	-	99	74.194	ENSCANG00000030559	SF3B6	99	74.194	Colobus_angolensis_palliatus
ENSCHOG00000013886	-	99	74.194	ENSCGRG00001014595	Sf3b6	99	74.194	Cricetulus_griseus_chok1gshd
ENSCHOG00000013886	-	99	74.194	ENSCGRG00000005272	Sf3b6	99	74.194	Cricetulus_griseus_crigri
ENSCHOG00000013886	-	99	71.774	ENSCSEG00000019017	sf3b6	99	71.774	Cynoglossus_semilaevis
ENSCHOG00000013886	-	99	73.387	ENSCVAG00000005055	sf3b6	99	73.387	Cyprinodon_variegatus
ENSCHOG00000013886	-	99	74.194	ENSDARG00000009753	sf3b6	99	74.194	Danio_rerio
ENSCHOG00000013886	-	99	74.194	ENSDNOG00000007148	SF3B6	99	74.194	Dasypus_novemcinctus
ENSCHOG00000013886	-	99	74.194	ENSDORG00000009772	Sf3b6	99	74.194	Dipodomys_ordii
ENSCHOG00000013886	-	100	63.636	ENSDORG00000027390	-	98	63.636	Dipodomys_ordii
ENSCHOG00000013886	-	100	63.636	ENSDORG00000029761	-	98	63.636	Dipodomys_ordii
ENSCHOG00000013886	-	78	75.000	FBgn0035692	Sf3b6	76	75.000	Drosophila_melanogaster
ENSCHOG00000013886	-	92	70.435	ENSEBUG00000004424	sf3b6	91	70.435	Eptatretus_burgeri
ENSCHOG00000013886	-	99	74.194	ENSEASG00005009993	SF3B6	99	74.194	Equus_asinus_asinus
ENSCHOG00000013886	-	99	66.129	ENSEASG00005008061	-	99	66.935	Equus_asinus_asinus
ENSCHOG00000013886	-	81	85.263	ENSECAG00000015618	SF3B6	87	85.263	Equus_caballus
ENSCHOG00000013886	-	98	66.379	ENSECAG00000027755	-	91	66.379	Equus_caballus
ENSCHOG00000013886	-	99	72.581	ENSELUG00000010379	sf3b6	99	72.581	Esox_lucius
ENSCHOG00000013886	-	99	74.194	ENSFCAG00000031365	SF3B6	99	74.194	Felis_catus
ENSCHOG00000013886	-	99	74.194	ENSFALG00000001651	SF3B6	99	74.194	Ficedula_albicollis
ENSCHOG00000013886	-	99	74.194	ENSFDAG00000007864	SF3B6	99	74.194	Fukomys_damarensis
ENSCHOG00000013886	-	99	73.387	ENSFHEG00000000685	sf3b6	99	73.387	Fundulus_heteroclitus
ENSCHOG00000013886	-	99	71.774	ENSGMOG00000005123	sf3b6	99	71.774	Gadus_morhua
ENSCHOG00000013886	-	71	72.527	ENSGALG00000016501	SF3B6	100	72.527	Gallus_gallus
ENSCHOG00000013886	-	99	72.581	ENSGAFG00000009334	sf3b6	99	72.581	Gambusia_affinis
ENSCHOG00000013886	-	99	71.774	ENSGACG00000004803	sf3b6	99	71.774	Gasterosteus_aculeatus
ENSCHOG00000013886	-	99	74.194	ENSGAGG00000012240	SF3B6	99	74.194	Gopherus_agassizii
ENSCHOG00000013886	-	99	74.194	ENSGGOG00000040806	SF3B6	99	74.194	Gorilla_gorilla
ENSCHOG00000013886	-	99	72.581	ENSHBUG00000012556	sf3b6	99	72.581	Haplochromis_burtoni
ENSCHOG00000013886	-	99	74.194	ENSHGLG00000014895	SF3B14	99	74.194	Heterocephalus_glaber_female
ENSCHOG00000013886	-	99	74.194	ENSHGLG00100008639	SF3B14	99	74.194	Heterocephalus_glaber_male
ENSCHOG00000013886	-	99	73.387	ENSHCOG00000019962	sf3b6	99	73.387	Hippocampus_comes
ENSCHOG00000013886	-	99	74.194	ENSIPUG00000023800	sf3b6	99	74.194	Ictalurus_punctatus
ENSCHOG00000013886	-	99	74.194	ENSJJAG00000021819	Sf3b6	99	74.194	Jaculus_jaculus
ENSCHOG00000013886	-	99	72.581	ENSKMAG00000004000	sf3b6	99	72.581	Kryptolebias_marmoratus
ENSCHOG00000013886	-	99	72.581	ENSLBEG00000022937	sf3b6	99	72.581	Labrus_bergylta
ENSCHOG00000013886	-	99	74.194	ENSLACG00000014326	SF3B6	99	74.194	Latimeria_chalumnae
ENSCHOG00000013886	-	99	74.194	ENSLOCG00000016481	sf3b6	99	74.194	Lepisosteus_oculatus
ENSCHOG00000013886	-	99	74.194	ENSLAFG00000029423	SF3B6	99	74.194	Loxodonta_africana
ENSCHOG00000013886	-	99	74.194	ENSMFAG00000038178	SF3B6	99	74.194	Macaca_fascicularis
ENSCHOG00000013886	-	99	74.194	ENSMMUG00000001282	SF3B6	99	74.194	Macaca_mulatta
ENSCHOG00000013886	-	99	74.194	ENSMNEG00000029050	SF3B6	99	74.194	Macaca_nemestrina
ENSCHOG00000013886	-	99	74.194	ENSMLEG00000019896	SF3B6	99	74.194	Mandrillus_leucophaeus
ENSCHOG00000013886	-	92	75.229	ENSMAMG00000007713	sf3b6	99	75.229	Mastacembelus_armatus
ENSCHOG00000013886	-	99	72.581	ENSMZEG00005003557	sf3b6	99	72.581	Maylandia_zebra
ENSCHOG00000013886	-	99	74.194	ENSMGAG00000014057	SF3B6	99	74.194	Meleagris_gallopavo
ENSCHOG00000013886	-	99	74.194	ENSMAUG00000000586	-	99	74.194	Mesocricetus_auratus
ENSCHOG00000013886	-	99	74.194	ENSMICG00000032874	SF3B6	99	74.194	Microcebus_murinus
ENSCHOG00000013886	-	99	74.194	ENSMOCG00000014338	Sf3b6	99	74.194	Microtus_ochrogaster
ENSCHOG00000013886	-	99	73.387	ENSMMOG00000015653	sf3b6	99	73.387	Mola_mola
ENSCHOG00000013886	-	99	66.935	ENSMODG00000002144	SF3B6	99	66.935	Monodelphis_domestica
ENSCHOG00000013886	-	99	73.387	ENSMALG00000019642	sf3b6	67	73.387	Monopterus_albus
ENSCHOG00000013886	-	99	74.194	MGP_CAROLIEiJ_G0017590	Sf3b6	99	74.194	Mus_caroli
ENSCHOG00000013886	-	99	74.194	ENSMUSG00000037361	Sf3b6	100	77.477	Mus_musculus
ENSCHOG00000013886	-	99	74.194	MGP_PahariEiJ_G0029348	Sf3b6	99	74.194	Mus_pahari
ENSCHOG00000013886	-	99	74.194	MGP_SPRETEiJ_G0018434	Sf3b6	99	74.194	Mus_spretus
ENSCHOG00000013886	-	99	74.194	ENSMPUG00000013957	SF3B6	99	74.194	Mustela_putorius_furo
ENSCHOG00000013886	-	99	74.194	ENSMLUG00000002473	SF3B6	99	74.194	Myotis_lucifugus
ENSCHOG00000013886	-	99	74.194	ENSNGAG00000020256	Sf3b6	99	74.194	Nannospalax_galili
ENSCHOG00000013886	-	99	72.581	ENSNBRG00000018244	sf3b6	99	72.581	Neolamprologus_brichardi
ENSCHOG00000013886	-	99	74.194	ENSNLEG00000000815	-	99	74.194	Nomascus_leucogenys
ENSCHOG00000013886	-	86	75.229	ENSODEG00000009547	SF3B6	92	75.229	Octodon_degus
ENSCHOG00000013886	-	99	72.581	ENSONIG00000001219	sf3b6	99	72.581	Oreochromis_niloticus
ENSCHOG00000013886	-	99	74.194	ENSOANG00000007627	SF3B6	99	74.194	Ornithorhynchus_anatinus
ENSCHOG00000013886	-	99	74.194	ENSOCUG00000022008	SF3B6	99	74.194	Oryctolagus_cuniculus
ENSCHOG00000013886	-	99	72.581	ENSORLG00000015955	sf3b6	99	72.581	Oryzias_latipes
ENSCHOG00000013886	-	99	72.581	ENSORLG00020005875	sf3b6	99	72.581	Oryzias_latipes_hni
ENSCHOG00000013886	-	99	72.581	ENSORLG00015001347	sf3b6	99	72.581	Oryzias_latipes_hsok
ENSCHOG00000013886	-	99	74.194	ENSOMEG00000014506	sf3b6	99	74.194	Oryzias_melastigma
ENSCHOG00000013886	-	99	74.194	ENSOGAG00000004468	SF3B6	99	74.194	Otolemur_garnettii
ENSCHOG00000013886	-	99	74.194	ENSOARG00000017819	SF3B6	99	74.194	Ovis_aries
ENSCHOG00000013886	-	99	74.194	ENSPPAG00000027816	SF3B6	99	74.194	Pan_paniscus
ENSCHOG00000013886	-	99	74.194	ENSPPRG00000023257	SF3B6	99	74.194	Panthera_pardus
ENSCHOG00000013886	-	99	74.194	ENSPTIG00000013322	SF3B6	99	74.194	Panthera_tigris_altaica
ENSCHOG00000013886	-	99	74.194	ENSPTRG00000011709	SF3B6	99	74.194	Pan_troglodytes
ENSCHOG00000013886	-	99	74.194	ENSPANG00000021963	SF3B6	99	74.194	Papio_anubis
ENSCHOG00000013886	-	99	74.194	ENSPKIG00000012311	sf3b6	99	74.194	Paramormyrops_kingsleyae
ENSCHOG00000013886	-	92	75.652	ENSPSIG00000017115	SF3B6	100	75.652	Pelodiscus_sinensis
ENSCHOG00000013886	-	81	83.158	ENSPMGG00000014621	sf3b6	79	83.158	Periophthalmus_magnuspinnatus
ENSCHOG00000013886	-	99	74.194	ENSPEMG00000010308	Sf3b6	99	74.194	Peromyscus_maniculatus_bairdii
ENSCHOG00000013886	-	94	67.797	ENSPMAG00000006008	sf3b6	94	67.797	Petromyzon_marinus
ENSCHOG00000013886	-	99	74.194	ENSPCIG00000022128	-	99	74.194	Phascolarctos_cinereus
ENSCHOG00000013886	-	98	56.098	ENSPCIG00000015858	-	98	56.098	Phascolarctos_cinereus
ENSCHOG00000013886	-	99	72.581	ENSPFOG00000012494	sf3b6	99	72.581	Poecilia_formosa
ENSCHOG00000013886	-	99	72.581	ENSPLAG00000020460	sf3b6	99	72.581	Poecilia_latipinna
ENSCHOG00000013886	-	99	72.581	ENSPMEG00000004426	sf3b6	99	72.581	Poecilia_mexicana
ENSCHOG00000013886	-	99	74.194	ENSPPYG00000012603	SF3B6	99	74.194	Pongo_abelii
ENSCHOG00000013886	-	99	74.194	ENSPVAG00000011346	SF3B6	99	74.194	Pteropus_vampyrus
ENSCHOG00000013886	-	99	72.581	ENSPNYG00000021832	sf3b6	99	72.581	Pundamilia_nyererei
ENSCHOG00000013886	-	99	74.194	ENSPNAG00000008845	sf3b6	92	82.000	Pygocentrus_nattereri
ENSCHOG00000013886	-	99	60.484	ENSRNOG00000046172	Sf3b6	99	60.484	Rattus_norvegicus
ENSCHOG00000013886	-	99	74.194	ENSRBIG00000039598	SF3B6	99	74.194	Rhinopithecus_bieti
ENSCHOG00000013886	-	99	74.194	ENSRROG00000011368	SF3B6	99	74.194	Rhinopithecus_roxellana
ENSCHOG00000013886	-	99	74.194	ENSSBOG00000002914	SF3B6	99	74.194	Saimiri_boliviensis_boliviensis
ENSCHOG00000013886	-	99	74.194	ENSSFOG00015014370	sf3b6	99	74.194	Scleropages_formosus
ENSCHOG00000013886	-	99	72.581	ENSSMAG00000004566	sf3b6	99	72.581	Scophthalmus_maximus
ENSCHOG00000013886	-	99	72.581	ENSSDUG00000006538	sf3b6	99	72.581	Seriola_dumerili
ENSCHOG00000013886	-	99	72.581	ENSSLDG00000004494	sf3b6	99	72.581	Seriola_lalandi_dorsalis
ENSCHOG00000013886	-	99	74.194	ENSSARG00000011902	-	99	74.194	Sorex_araneus
ENSCHOG00000013886	-	99	74.194	ENSSPUG00000014919	SF3B6	99	74.194	Sphenodon_punctatus
ENSCHOG00000013886	-	99	72.581	ENSSPAG00000013201	sf3b6	99	72.581	Stegastes_partitus
ENSCHOG00000013886	-	99	74.194	ENSSSCG00000008587	SF3B6	99	74.194	Sus_scrofa
ENSCHOG00000013886	-	99	74.194	ENSTGUG00000013191	SF3B6	99	74.194	Taeniopygia_guttata
ENSCHOG00000013886	-	99	72.581	ENSTRUG00000025286	sf3b6	99	72.581	Takifugu_rubripes
ENSCHOG00000013886	-	99	72.581	ENSTNIG00000009719	sf3b6	99	72.581	Tetraodon_nigroviridis
ENSCHOG00000013886	-	92	75.652	ENSTBEG00000012532	SF3B6	100	75.652	Tupaia_belangeri
ENSCHOG00000013886	-	92	75.652	ENSTTRG00000013430	SF3B6	100	75.652	Tursiops_truncatus
ENSCHOG00000013886	-	99	74.194	ENSUAMG00000025329	SF3B6	99	74.194	Ursus_americanus
ENSCHOG00000013886	-	99	63.200	ENSUAMG00000000978	-	99	63.200	Ursus_americanus
ENSCHOG00000013886	-	99	74.194	ENSUMAG00000022835	SF3B6	99	74.194	Ursus_maritimus
ENSCHOG00000013886	-	92	75.652	ENSVPAG00000005546	SF3B6	100	75.652	Vicugna_pacos
ENSCHOG00000013886	-	99	74.194	ENSVVUG00000010874	SF3B6	99	74.194	Vulpes_vulpes
ENSCHOG00000013886	-	99	73.387	ENSXETG00000018204	sf3b6	99	73.387	Xenopus_tropicalis
ENSCHOG00000013886	-	81	83.158	ENSXCOG00000008477	sf3b6	74	83.158	Xiphophorus_couchianus
ENSCHOG00000013886	-	99	72.581	ENSXMAG00000010747	sf3b6	92	80.808	Xiphophorus_maculatus