EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000013939 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 4052 bases
Position: chrscaffold_77540:4515-8566
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000012349	zf-C2H2	PF00096.26	1.5e-18	1	3
ENSCHOP00000012349	zf-C2H2	PF00096.26	1.5e-18	2	3
ENSCHOP00000012349	zf-C2H2	PF00096.26	1.5e-18	3	3
ENSCHOP00000012349	zf-met	PF12874.7	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000013979	-	2526	-	ENSCHOP00000012349	841 (aa)	-	UPI0001FA0DBD

Gene Model

Click here to download ENSCHOG00000013939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000013939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000013939	-	91	82.868	ENSG00000256463	SALL3	99	73.171	Homo_sapiens
ENSCHOG00000013939	-	91	70.711	ENSAPOG00000020922	sall3a	61	71.548	Acanthochromis_polyacanthus
ENSCHOG00000013939	-	69	64.228	ENSAPOG00000004264	sall3b	50	64.228	Acanthochromis_polyacanthus
ENSCHOG00000013939	-	91	80.913	ENSAMEG00000010206	SALL3	69	82.988	Ailuropoda_melanoleuca
ENSCHOG00000013939	-	91	71.260	ENSACIG00000014041	sall3a	82	71.260	Amphilophus_citrinellus
ENSCHOG00000013939	-	89	59.615	ENSACIG00000019407	sall3b	92	59.615	Amphilophus_citrinellus
ENSCHOG00000013939	-	90	71.825	ENSAOCG00000010863	sall3a	80	71.825	Amphiprion_ocellaris
ENSCHOG00000013939	-	90	71.825	ENSAPEG00000019278	sall3a	62	71.825	Amphiprion_percula
ENSCHOG00000013939	-	71	65.106	ENSAPEG00000018170	sall3b	71	65.106	Amphiprion_percula
ENSCHOG00000013939	-	91	69.874	ENSATEG00000024524	sall3a	94	69.874	Anabas_testudineus
ENSCHOG00000013939	-	86	68.326	ENSATEG00000004914	sall3b	63	61.194	Anabas_testudineus
ENSCHOG00000013939	-	91	80.812	ENSAPLG00000013214	SALL3	64	80.812	Anas_platyrhynchos
ENSCHOG00000013939	-	91	76.033	ENSACAG00000000478	SALL3	63	76.033	Anolis_carolinensis
ENSCHOG00000013939	-	91	80.426	ENSANAG00000032412	SALL3	66	80.633	Aotus_nancymaae
ENSCHOG00000013939	-	91	58.824	ENSACLG00000001619	sall3b	68	58.824	Astatotilapia_calliptera
ENSCHOG00000013939	-	91	71.654	ENSACLG00000022451	sall3a	84	71.654	Astatotilapia_calliptera
ENSCHOG00000013939	-	86	75.000	ENSAMXG00000011185	sall3a	80	75.000	Astyanax_mexicanus
ENSCHOG00000013939	-	68	68.056	ENSAMXG00000035442	sall3b	67	68.056	Astyanax_mexicanus
ENSCHOG00000013939	-	91	79.336	ENSBTAG00000050200	SALL3	81	79.336	Bos_taurus
ENSCHOG00000013939	-	91	81.006	ENSCJAG00000007332	SALL3	66	81.564	Callithrix_jacchus
ENSCHOG00000013939	-	91	80.812	ENSCAFG00000000013	SALL3	70	80.812	Canis_familiaris
ENSCHOG00000013939	-	91	79.779	ENSCAFG00020015092	SALL3	72	79.779	Canis_lupus_dingo
ENSCHOG00000013939	-	91	79.143	ENSCHIG00000000145	SALL3	67	79.143	Capra_hircus
ENSCHOG00000013939	-	91	80.074	ENSTSYG00000028846	SALL3	85	80.074	Carlito_syrichta
ENSCHOG00000013939	-	91	81.618	ENSCAPG00000006496	SALL3	71	81.181	Cavia_aperea
ENSCHOG00000013939	-	91	81.181	ENSCPOG00000008546	SALL3	65	81.181	Cavia_porcellus
ENSCHOG00000013939	-	91	79.705	ENSCCAG00000034863	SALL3	64	79.705	Cebus_capucinus
ENSCHOG00000013939	-	91	82.682	ENSCATG00000029727	SALL3	81	80.000	Cercocebus_atys
ENSCHOG00000013939	-	91	80.074	ENSCLAG00000007727	SALL3	65	80.074	Chinchilla_lanigera
ENSCHOG00000013939	-	91	82.868	ENSCSAG00000018244	SALL3	66	83.426	Chlorocebus_sabaeus
ENSCHOG00000013939	-	91	83.640	ENSCPBG00000003657	SALL3	65	83.640	Chrysemys_picta_bellii
ENSCHOG00000013939	-	91	78.723	ENSCANG00000030302	SALL3	84	78.723	Colobus_angolensis_palliatus
ENSCHOG00000013939	-	91	80.331	ENSCGRG00001018203	Sall3	66	81.066	Cricetulus_griseus_chok1gshd
ENSCHOG00000013939	-	91	78.598	ENSCGRG00000017127	Sall3	65	77.860	Cricetulus_griseus_crigri
ENSCHOG00000013939	-	91	71.937	ENSCSEG00000009058	sall3a	62	71.937	Cynoglossus_semilaevis
ENSCHOG00000013939	-	91	59.615	ENSCSEG00000009569	sall3b	74	59.615	Cynoglossus_semilaevis
ENSCHOG00000013939	-	91	70.763	ENSCVAG00000009684	sall3a	79	70.763	Cyprinodon_variegatus
ENSCHOG00000013939	-	85	55.556	ENSCVAG00000017005	sall3b	79	95.455	Cyprinodon_variegatus
ENSCHOG00000013939	-	91	61.224	ENSDARG00000057586	sall3b	51	68.095	Danio_rerio
ENSCHOG00000013939	-	91	67.984	ENSDARG00000079613	sall3a	62	67.984	Danio_rerio
ENSCHOG00000013939	-	91	86.975	ENSDNOG00000025483	SALL3	87	86.975	Dasypus_novemcinctus
ENSCHOG00000013939	-	91	76.374	ENSDORG00000002702	Sall3	80	76.923	Dipodomys_ordii
ENSCHOG00000013939	-	89	79.852	ENSETEG00000001481	SALL3	84	79.852	Echinops_telfairi
ENSCHOG00000013939	-	91	81.181	ENSEASG00005002071	SALL3	63	81.743	Equus_asinus_asinus
ENSCHOG00000013939	-	91	80.913	ENSECAG00000015414	SALL3	63	82.158	Equus_caballus
ENSCHOG00000013939	-	91	63.462	ENSELUG00000009541	sall3b	62	63.462	Esox_lucius
ENSCHOG00000013939	-	91	68.992	ENSELUG00000020351	sall3a	63	70.954	Esox_lucius
ENSCHOG00000013939	-	91	82.773	ENSFCAG00000028839	SALL3	65	82.773	Felis_catus
ENSCHOG00000013939	-	91	80.812	ENSFALG00000013343	SALL3	63	80.812	Ficedula_albicollis
ENSCHOG00000013939	-	91	80.074	ENSFDAG00000014697	SALL3	65	80.074	Fukomys_damarensis
ENSCHOG00000013939	-	90	70.635	ENSGMOG00000006649	sall3a	63	70.635	Gadus_morhua
ENSCHOG00000013939	-	91	83.456	ENSGALG00000041404	SALL3	65	83.456	Gallus_gallus
ENSCHOG00000013939	-	91	70.635	ENSGAFG00000001581	sall3a	81	70.635	Gambusia_affinis
ENSCHOG00000013939	-	78	58.333	ENSGAFG00000014435	-	64	59.788	Gambusia_affinis
ENSCHOG00000013939	-	91	58.333	ENSGACG00000002533	sall3b	71	57.143	Gasterosteus_aculeatus
ENSCHOG00000013939	-	91	68.182	ENSGACG00000005503	sall3a	65	68.182	Gasterosteus_aculeatus
ENSCHOG00000013939	-	91	79.752	ENSGAGG00000000925	SALL3	63	79.752	Gopherus_agassizii
ENSCHOG00000013939	-	91	82.868	ENSGGOG00000008127	SALL3	81	80.426	Gorilla_gorilla
ENSCHOG00000013939	-	91	71.654	ENSHBUG00000004486	sall3a	62	71.654	Haplochromis_burtoni
ENSCHOG00000013939	-	91	59.615	ENSHBUG00000018127	sall3b	92	59.615	Haplochromis_burtoni
ENSCHOG00000013939	-	91	80.443	ENSHGLG00000000824	SALL3	64	80.443	Heterocephalus_glaber_female
ENSCHOG00000013939	-	91	80.443	ENSHGLG00100008694	SALL3	65	80.443	Heterocephalus_glaber_male
ENSCHOG00000013939	-	91	70.196	ENSHCOG00000010423	sall3a	84	70.428	Hippocampus_comes
ENSCHOG00000013939	-	89	72.908	ENSIPUG00000003378	sall3	62	72.908	Ictalurus_punctatus
ENSCHOG00000013939	-	91	80.812	ENSSTOG00000004145	SALL3	64	80.812	Ictidomys_tridecemlineatus
ENSCHOG00000013939	-	91	80.819	ENSJJAG00000014351	Sall3	65	82.123	Jaculus_jaculus
ENSCHOG00000013939	-	91	72.112	ENSKMAG00000003846	sall3a	83	72.112	Kryptolebias_marmoratus
ENSCHOG00000013939	-	88	61.224	ENSKMAG00000012418	sall3b	69	58.824	Kryptolebias_marmoratus
ENSCHOG00000013939	-	89	65.455	ENSLBEG00000015706	sall3b	83	65.455	Labrus_bergylta
ENSCHOG00000013939	-	91	73.123	ENSLBEG00000005152	sall3a	68	73.123	Labrus_bergylta
ENSCHOG00000013939	-	91	77.132	ENSLOCG00000007831	sall3a	63	77.132	Lepisosteus_oculatus
ENSCHOG00000013939	-	91	83.640	ENSLAFG00000013521	SALL3	66	83.640	Loxodonta_africana
ENSCHOG00000013939	-	91	82.682	ENSMFAG00000031402	SALL3	69	83.240	Macaca_fascicularis
ENSCHOG00000013939	-	91	82.495	ENSMMUG00000000286	SALL3	66	83.054	Macaca_mulatta
ENSCHOG00000013939	-	91	82.682	ENSMNEG00000029916	SALL3	67	83.240	Macaca_nemestrina
ENSCHOG00000013939	-	85	66.355	ENSMAMG00000006101	sall3b	78	66.355	Mastacembelus_armatus
ENSCHOG00000013939	-	91	71.008	ENSMAMG00000001276	sall3a	67	71.008	Mastacembelus_armatus
ENSCHOG00000013939	-	91	71.654	ENSMZEG00005007586	sall3a	84	71.654	Maylandia_zebra
ENSCHOG00000013939	-	91	58.824	ENSMZEG00005026224	sall3b	68	58.824	Maylandia_zebra
ENSCHOG00000013939	-	91	81.181	ENSMGAG00000002297	SALL3	63	81.181	Meleagris_gallopavo
ENSCHOG00000013939	-	91	79.963	ENSMAUG00000011828	Sall3	66	81.066	Mesocricetus_auratus
ENSCHOG00000013939	-	91	77.872	ENSMICG00000017395	SALL3	81	77.872	Microcebus_murinus
ENSCHOG00000013939	-	91	79.336	ENSMOCG00000013205	Sall3	64	79.336	Microtus_ochrogaster
ENSCHOG00000013939	-	91	72.835	ENSMMOG00000003253	sall3a	83	72.835	Mola_mola
ENSCHOG00000013939	-	91	59.259	ENSMMOG00000014246	sall3b	83	58.333	Mola_mola
ENSCHOG00000013939	-	91	81.900	ENSMODG00000012231	SALL3	63	81.900	Monodelphis_domestica
ENSCHOG00000013939	-	91	71.250	ENSMALG00000003343	sall3a	63	72.083	Monopterus_albus
ENSCHOG00000013939	-	91	56.452	ENSMALG00000015200	sall3b	66	55.769	Monopterus_albus
ENSCHOG00000013939	-	91	80.443	MGP_CAROLIEiJ_G0022442	Sall3	64	80.443	Mus_caroli
ENSCHOG00000013939	-	91	79.705	ENSMUSG00000024565	Sall3	64	79.705	Mus_musculus
ENSCHOG00000013939	-	91	80.443	MGP_PahariEiJ_G0019170	Sall3	64	80.443	Mus_pahari
ENSCHOG00000013939	-	91	80.443	MGP_SPRETEiJ_G0023357	Sall3	63	80.443	Mus_spretus
ENSCHOG00000013939	-	84	78.661	ENSMPUG00000016646	SALL3	68	79.439	Mustela_putorius_furo
ENSCHOG00000013939	-	91	81.250	ENSMLUG00000010582	SALL3	66	81.250	Myotis_lucifugus
ENSCHOG00000013939	-	91	81.750	ENSNGAG00000023772	Sall3	66	82.309	Nannospalax_galili
ENSCHOG00000013939	-	91	70.042	ENSNBRG00000008974	sall3a	63	70.042	Neolamprologus_brichardi
ENSCHOG00000013939	-	91	59.615	ENSNBRG00000016034	sall3b	92	59.615	Neolamprologus_brichardi
ENSCHOG00000013939	-	91	82.309	ENSNLEG00000008217	SALL3	81	81.776	Nomascus_leucogenys
ENSCHOG00000013939	-	91	82.156	ENSODEG00000002692	SALL3	67	82.169	Octodon_degus
ENSCHOG00000013939	-	91	69.068	ENSONIG00000007305	sall3a	64	68.644	Oreochromis_niloticus
ENSCHOG00000013939	-	91	58.333	ENSONIG00000013791	sall3b	64	58.333	Oreochromis_niloticus
ENSCHOG00000013939	-	66	100.000	ENSOANG00000010135	-	95	100.000	Ornithorhynchus_anatinus
ENSCHOG00000013939	-	89	83.200	ENSOCUG00000029398	SALL3	71	83.200	Oryctolagus_cuniculus
ENSCHOG00000013939	-	90	63.462	ENSOCUG00000004364	-	60	63.462	Oryctolagus_cuniculus
ENSCHOG00000013939	-	91	71.146	ENSORLG00000020718	sall3a	62	71.146	Oryzias_latipes
ENSCHOG00000013939	-	91	69.038	ENSORLG00020001794	sall3a	63	69.874	Oryzias_latipes_hni
ENSCHOG00000013939	-	62	79.310	ENSORLG00015005877	sall3b	69	63.462	Oryzias_latipes_hsok
ENSCHOG00000013939	-	91	70.751	ENSORLG00015018152	sall3a	92	70.751	Oryzias_latipes_hsok
ENSCHOG00000013939	-	91	71.600	ENSOMEG00000011390	sall3a	62	71.600	Oryzias_melastigma
ENSCHOG00000013939	-	91	79.926	ENSOGAG00000031681	SALL3	66	80.663	Otolemur_garnettii
ENSCHOG00000013939	-	91	78.189	ENSOARG00000004353	SALL3	77	78.189	Ovis_aries
ENSCHOG00000013939	-	91	80.851	ENSPPAG00000029586	-	93	82.243	Pan_paniscus
ENSCHOG00000013939	-	91	83.054	ENSPTRG00000010126	SALL3	81	80.426	Pan_troglodytes
ENSCHOG00000013939	-	91	83.054	ENSPANG00000006485	SALL3	82	79.574	Papio_anubis
ENSCHOG00000013939	-	82	79.720	ENSPKIG00000013427	sall3a	59	79.720	Paramormyrops_kingsleyae
ENSCHOG00000013939	-	91	67.194	ENSPKIG00000018271	SALL3	82	69.880	Paramormyrops_kingsleyae
ENSCHOG00000013939	-	91	80.812	ENSPSIG00000008556	SALL3	68	80.465	Pelodiscus_sinensis
ENSCHOG00000013939	-	91	70.370	ENSPMGG00000017042	sall3a	62	71.193	Periophthalmus_magnuspinnatus
ENSCHOG00000013939	-	84	61.395	ENSPMGG00000002913	sall3b	57	61.395	Periophthalmus_magnuspinnatus
ENSCHOG00000013939	-	91	79.963	ENSPEMG00000022799	Sall3	66	81.250	Peromyscus_maniculatus_bairdii
ENSCHOG00000013939	-	91	84.375	ENSPCIG00000002472	SALL3	65	84.375	Phascolarctos_cinereus
ENSCHOG00000013939	-	91	71.146	ENSPFOG00000019127	sall3a	62	71.146	Poecilia_formosa
ENSCHOG00000013939	-	91	71.032	ENSPLAG00000018123	sall3a	82	71.032	Poecilia_latipinna
ENSCHOG00000013939	-	74	64.545	ENSPMEG00000014946	sall3a	55	64.545	Poecilia_mexicana
ENSCHOG00000013939	-	91	63.462	ENSPMEG00000023703	sall3b	79	63.462	Poecilia_mexicana
ENSCHOG00000013939	-	74	64.545	ENSPREG00000014420	sall3a	54	64.545	Poecilia_reticulata
ENSCHOG00000013939	-	91	80.841	ENSPPYG00000009253	SALL3	65	82.243	Pongo_abelii
ENSCHOG00000013939	-	91	83.426	ENSPCAG00000006522	SALL3	67	83.426	Procavia_capensis
ENSCHOG00000013939	-	91	81.750	ENSPCOG00000012553	SALL3	86	78.723	Propithecus_coquereli
ENSCHOG00000013939	-	91	70.764	ENSPVAG00000014645	SALL3	67	70.764	Pteropus_vampyrus
ENSCHOG00000013939	-	91	70.042	ENSPNYG00000012783	sall3a	63	70.042	Pundamilia_nyererei
ENSCHOG00000013939	-	91	70.233	ENSPNYG00000005353	sall3b	92	59.615	Pundamilia_nyererei
ENSCHOG00000013939	-	91	80.515	ENSRNOG00000026116	Sall3	73	81.618	Rattus_norvegicus
ENSCHOG00000013939	-	91	82.309	ENSRBIG00000036190	SALL3	67	82.868	Rhinopithecus_bieti
ENSCHOG00000013939	-	91	82.495	ENSRROG00000034130	SALL3	82	80.851	Rhinopithecus_roxellana
ENSCHOG00000013939	-	91	77.731	ENSSBOG00000023380	SALL3	93	80.074	Saimiri_boliviensis_boliviensis
ENSCHOG00000013939	-	91	82.353	ENSSHAG00000015872	SALL3	63	82.353	Sarcophilus_harrisii
ENSCHOG00000013939	-	91	70.168	ENSSFOG00015009159	SALL3	81	71.130	Scleropages_formosus
ENSCHOG00000013939	-	91	71.849	ENSSFOG00015012223	sall3a	96	72.047	Scleropages_formosus
ENSCHOG00000013939	-	85	69.626	ENSSMAG00000019762	sall3b	68	55.918	Scophthalmus_maximus
ENSCHOG00000013939	-	91	70.079	ENSSMAG00000007674	sall3a	62	70.339	Scophthalmus_maximus
ENSCHOG00000013939	-	91	71.849	ENSSDUG00000011099	sall3a	63	71.849	Seriola_dumerili
ENSCHOG00000013939	-	91	59.615	ENSSDUG00000010584	sall3b	89	59.615	Seriola_dumerili
ENSCHOG00000013939	-	86	69.159	ENSSLDG00000016800	sall3b	63	58.333	Seriola_lalandi_dorsalis
ENSCHOG00000013939	-	91	71.429	ENSSLDG00000012706	sall3a	63	71.429	Seriola_lalandi_dorsalis
ENSCHOG00000013939	-	88	65.164	ENSSPAG00000003172	sall3b	81	65.164	Stegastes_partitus
ENSCHOG00000013939	-	89	73.251	ENSSPAG00000013114	sall3a	83	70.866	Stegastes_partitus
ENSCHOG00000013939	-	91	81.092	ENSSSCG00000004858	SALL3	66	81.092	Sus_scrofa
ENSCHOG00000013939	-	91	80.090	ENSTGUG00000006541	SALL3	64	80.090	Taeniopygia_guttata
ENSCHOG00000013939	-	91	76.000	ENSTRUG00000017423	sall3a	83	76.000	Takifugu_rubripes
ENSCHOG00000013939	-	68	66.393	ENSTNIG00000001257	sall3a	57	66.393	Tetraodon_nigroviridis
ENSCHOG00000013939	-	91	78.481	ENSTTRG00000004958	SALL3	78	78.481	Tursiops_truncatus
ENSCHOG00000013939	-	91	80.498	ENSUAMG00000016908	SALL3	81	82.573	Ursus_americanus
ENSCHOG00000013939	-	91	79.668	ENSVVUG00000018838	SALL3	86	79.668	Vulpes_vulpes
ENSCHOG00000013939	-	91	74.908	ENSXETG00000000845	sall3	63	74.908	Xenopus_tropicalis
ENSCHOG00000013939	-	61	58.333	ENSXCOG00000018799	sall3b	53	58.333	Xiphophorus_couchianus
ENSCHOG00000013939	-	91	69.874	ENSXCOG00000016907	sall3a	63	69.874	Xiphophorus_couchianus
ENSCHOG00000013939	-	91	70.356	ENSXMAG00000023447	sall3a	62	70.356	Xiphophorus_maculatus
ENSCHOG00000013939	-	59	59.184	ENSXMAG00000000798	sall3b	53	59.184	Xiphophorus_maculatus