EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHOG00000013961 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Choloepus_hoffmanni
Status: putative
Strand: Minus strand
Length: 76242 bases
Position: chrGeneScaffold_2208:12024-88265
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHOP00000012371	XRN_N	PF03159.18	2.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHOT00000014003	-	5004	-	ENSCHOP00000012371	1667 (aa)	-	UPI0001FA0DD1

Gene Model

Click here to download ENSCHOG00000013961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHOG00000013961's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHOG00000013961	-	62	98.701	ENSG00000114127	XRN1	72	98.701	Homo_sapiens
ENSCHOG00000013961	-	52	94.805	ENSAPOG00000000622	xrn1	56	94.805	Acanthochromis_polyacanthus
ENSCHOG00000013961	-	59	98.701	ENSAMEG00000012538	XRN1	57	98.701	Ailuropoda_melanoleuca
ENSCHOG00000013961	-	52	92.208	ENSACIG00000001057	xrn1	56	92.208	Amphilophus_citrinellus
ENSCHOG00000013961	-	52	94.805	ENSAOCG00000014097	xrn1	54	94.805	Amphiprion_ocellaris
ENSCHOG00000013961	-	53	94.805	ENSAPEG00000006620	xrn1	55	94.805	Amphiprion_percula
ENSCHOG00000013961	-	51	93.506	ENSATEG00000009752	xrn1	58	93.506	Anabas_testudineus
ENSCHOG00000013961	-	57	97.403	ENSAPLG00000004905	XRN1	54	97.403	Anas_platyrhynchos
ENSCHOG00000013961	-	62	97.403	ENSACAG00000004985	XRN1	59	97.403	Anolis_carolinensis
ENSCHOG00000013961	-	59	98.701	ENSANAG00000029013	XRN1	58	98.701	Aotus_nancymaae
ENSCHOG00000013961	-	51	93.506	ENSACLG00000004806	xrn1	53	93.506	Astatotilapia_calliptera
ENSCHOG00000013961	-	52	93.506	ENSAMXG00000019370	xrn1	71	93.506	Astyanax_mexicanus
ENSCHOG00000013961	-	59	98.701	ENSBTAG00000011524	XRN1	58	98.701	Bos_taurus
ENSCHOG00000013961	-	62	98.701	ENSCJAG00000001872	XRN1	61	98.701	Callithrix_jacchus
ENSCHOG00000013961	-	61	100.000	ENSCAFG00000007783	XRN1	60	100.000	Canis_familiaris
ENSCHOG00000013961	-	59	98.701	ENSCAFG00020009120	XRN1	57	98.701	Canis_lupus_dingo
ENSCHOG00000013961	-	62	98.701	ENSCHIG00000019192	XRN1	60	98.701	Capra_hircus
ENSCHOG00000013961	-	59	98.701	ENSTSYG00000002705	XRN1	58	98.701	Carlito_syrichta
ENSCHOG00000013961	-	59	98.701	ENSCCAG00000034800	XRN1	58	98.701	Cebus_capucinus
ENSCHOG00000013961	-	59	98.701	ENSCATG00000041794	XRN1	58	98.701	Cercocebus_atys
ENSCHOG00000013961	-	62	98.701	ENSCLAG00000001451	XRN1	60	98.701	Chinchilla_lanigera
ENSCHOG00000013961	-	59	98.701	ENSCSAG00000011265	XRN1	58	98.701	Chlorocebus_sabaeus
ENSCHOG00000013961	-	62	98.701	ENSCANG00000037495	XRN1	62	98.701	Colobus_angolensis_palliatus
ENSCHOG00000013961	-	59	98.701	ENSCGRG00001019411	Xrn1	57	98.701	Cricetulus_griseus_chok1gshd
ENSCHOG00000013961	-	59	98.701	ENSCGRG00000012464	Xrn1	57	98.701	Cricetulus_griseus_crigri
ENSCHOG00000013961	-	55	94.805	ENSDARG00000091652	xrn1	53	94.805	Danio_rerio
ENSCHOG00000013961	-	59	97.403	ENSDORG00000013833	Xrn1	57	97.403	Dipodomys_ordii
ENSCHOG00000013961	-	62	98.701	ENSEASG00005002687	XRN1	62	98.701	Equus_asinus_asinus
ENSCHOG00000013961	-	62	98.701	ENSECAG00000008301	XRN1	62	98.701	Equus_caballus
ENSCHOG00000013961	-	58	98.701	ENSEEUG00000011323	XRN1	57	98.701	Erinaceus_europaeus
ENSCHOG00000013961	-	52	94.805	ENSELUG00000000169	xrn1	54	94.805	Esox_lucius
ENSCHOG00000013961	-	54	98.701	ENSFCAG00000027589	XRN1	54	98.701	Felis_catus
ENSCHOG00000013961	-	62	96.104	ENSFALG00000007021	XRN1	58	96.104	Ficedula_albicollis
ENSCHOG00000013961	-	59	98.701	ENSFDAG00000020494	XRN1	57	98.701	Fukomys_damarensis
ENSCHOG00000013961	-	55	97.403	ENSGALG00000002706	XRN1	52	97.403	Gallus_gallus
ENSCHOG00000013961	-	53	95.833	ENSGACG00000014328	xrn1	51	94.805	Gasterosteus_aculeatus
ENSCHOG00000013961	-	57	98.701	ENSGAGG00000017535	XRN1	57	98.701	Gopherus_agassizii
ENSCHOG00000013961	-	59	98.701	ENSGGOG00000008047	XRN1	58	98.701	Gorilla_gorilla
ENSCHOG00000013961	-	53	93.506	ENSHBUG00000005908	xrn1	56	93.506	Haplochromis_burtoni
ENSCHOG00000013961	-	59	98.701	ENSHGLG00000014476	XRN1	57	98.701	Heterocephalus_glaber_female
ENSCHOG00000013961	-	59	98.701	ENSHGLG00100015130	XRN1	57	98.701	Heterocephalus_glaber_male
ENSCHOG00000013961	-	52	95.833	ENSHCOG00000014062	xrn1	54	94.805	Hippocampus_comes
ENSCHOG00000013961	-	55	93.506	ENSIPUG00000015229	xrn1	53	93.506	Ictalurus_punctatus
ENSCHOG00000013961	-	62	98.701	ENSSTOG00000013552	XRN1	60	98.701	Ictidomys_tridecemlineatus
ENSCHOG00000013961	-	59	96.104	ENSJJAG00000010863	Xrn1	57	98.701	Jaculus_jaculus
ENSCHOG00000013961	-	51	94.805	ENSLBEG00000018656	xrn1	73	94.805	Labrus_bergylta
ENSCHOG00000013961	-	62	97.403	ENSLACG00000009020	XRN1	59	97.403	Latimeria_chalumnae
ENSCHOG00000013961	-	56	94.805	ENSLOCG00000007944	xrn1	54	94.805	Lepisosteus_oculatus
ENSCHOG00000013961	-	59	98.701	ENSMFAG00000032599	XRN1	58	98.701	Macaca_fascicularis
ENSCHOG00000013961	-	59	98.701	ENSMMUG00000014038	XRN1	58	98.701	Macaca_mulatta
ENSCHOG00000013961	-	59	98.701	ENSMNEG00000034217	XRN1	58	98.701	Macaca_nemestrina
ENSCHOG00000013961	-	52	93.506	ENSMAMG00000013219	xrn1	53	93.506	Mastacembelus_armatus
ENSCHOG00000013961	-	51	93.506	ENSMZEG00005015099	xrn1	53	93.506	Maylandia_zebra
ENSCHOG00000013961	-	55	97.403	ENSMGAG00000006333	XRN1	53	97.403	Meleagris_gallopavo
ENSCHOG00000013961	-	62	98.701	ENSMICG00000048948	XRN1	72	98.701	Microcebus_murinus
ENSCHOG00000013961	-	62	98.701	ENSMODG00000021236	XRN1	61	98.701	Monodelphis_domestica
ENSCHOG00000013961	-	53	95.833	ENSMALG00000004098	xrn1	54	93.506	Monopterus_albus
ENSCHOG00000013961	-	60	98.701	MGP_CAROLIEiJ_G0032535	Xrn1	61	98.701	Mus_caroli
ENSCHOG00000013961	-	62	98.701	ENSMUSG00000032410	Xrn1	60	98.701	Mus_musculus
ENSCHOG00000013961	-	62	98.701	MGP_PahariEiJ_G0015404	Xrn1	60	98.701	Mus_pahari
ENSCHOG00000013961	-	62	98.701	MGP_SPRETEiJ_G0033678	Xrn1	60	98.701	Mus_spretus
ENSCHOG00000013961	-	59	98.701	ENSMPUG00000012040	XRN1	58	98.701	Mustela_putorius_furo
ENSCHOG00000013961	-	58	98.701	ENSMLUG00000016885	XRN1	56	98.701	Myotis_lucifugus
ENSCHOG00000013961	-	62	98.701	ENSNLEG00000004726	XRN1	62	98.701	Nomascus_leucogenys
ENSCHOG00000013961	-	51	98.611	ENSMEUG00000014473	-	50	98.701	Notamacropus_eugenii
ENSCHOG00000013961	-	53	93.506	ENSONIG00000016673	xrn1	54	93.506	Oreochromis_niloticus
ENSCHOG00000013961	-	51	89.855	ENSOANG00000006735	XRN1	54	89.855	Ornithorhynchus_anatinus
ENSCHOG00000013961	-	59	97.403	ENSOCUG00000001861	XRN1	56	97.403	Oryctolagus_cuniculus
ENSCHOG00000013961	-	54	95.833	ENSORLG00000013005	xrn1	52	94.805	Oryzias_latipes
ENSCHOG00000013961	-	54	95.833	ENSORLG00020005559	xrn1	53	94.805	Oryzias_latipes_hni
ENSCHOG00000013961	-	54	95.833	ENSORLG00015022523	xrn1	53	94.805	Oryzias_latipes_hsok
ENSCHOG00000013961	-	52	94.805	ENSOMEG00000015397	xrn1	57	94.805	Oryzias_melastigma
ENSCHOG00000013961	-	62	98.701	ENSOGAG00000000170	XRN1	61	98.701	Otolemur_garnettii
ENSCHOG00000013961	-	59	98.701	ENSOARG00000006343	XRN1	58	98.701	Ovis_aries
ENSCHOG00000013961	-	59	97.403	ENSPPAG00000010180	XRN1	58	97.403	Pan_paniscus
ENSCHOG00000013961	-	59	98.701	ENSPPRG00000007125	XRN1	57	98.701	Panthera_pardus
ENSCHOG00000013961	-	59	98.701	ENSPTIG00000021081	XRN1	57	98.701	Panthera_tigris_altaica
ENSCHOG00000013961	-	59	97.403	ENSPTRG00000015482	XRN1	58	97.403	Pan_troglodytes
ENSCHOG00000013961	-	59	98.701	ENSPANG00000010638	XRN1	58	98.701	Papio_anubis
ENSCHOG00000013961	-	62	98.701	ENSPSIG00000018050	XRN1	60	98.701	Pelodiscus_sinensis
ENSCHOG00000013961	-	62	98.701	ENSPCIG00000028735	XRN1	63	98.701	Phascolarctos_cinereus
ENSCHOG00000013961	-	53	94.805	ENSPREG00000021147	xrn1	54	94.805	Poecilia_reticulata
ENSCHOG00000013961	-	62	98.701	ENSPPYG00000014172	XRN1	62	98.701	Pongo_abelii
ENSCHOG00000013961	-	62	98.701	ENSPCOG00000013089	XRN1	61	98.701	Propithecus_coquereli
ENSCHOG00000013961	-	56	98.701	ENSPVAG00000016265	XRN1	56	100.000	Pteropus_vampyrus
ENSCHOG00000013961	-	52	93.506	ENSPNYG00000010570	xrn1	53	93.506	Pundamilia_nyererei
ENSCHOG00000013961	-	55	93.506	ENSPNAG00000023531	xrn1	54	93.506	Pygocentrus_nattereri
ENSCHOG00000013961	-	59	98.701	ENSRNOG00000042951	Xrn1	56	98.701	Rattus_norvegicus
ENSCHOG00000013961	-	59	98.701	ENSRBIG00000041227	XRN1	58	98.701	Rhinopithecus_bieti
ENSCHOG00000013961	-	62	98.701	ENSSBOG00000029561	XRN1	61	98.701	Saimiri_boliviensis_boliviensis
ENSCHOG00000013961	-	62	98.701	ENSSHAG00000016207	XRN1	60	98.701	Sarcophilus_harrisii
ENSCHOG00000013961	-	52	94.805	ENSSFOG00015024211	xrn1	52	94.805	Scleropages_formosus
ENSCHOG00000013961	-	53	95.833	ENSSMAG00000016534	xrn1	55	94.805	Scophthalmus_maximus
ENSCHOG00000013961	-	54	95.833	ENSSDUG00000010306	xrn1	59	94.805	Seriola_dumerili
ENSCHOG00000013961	-	54	95.833	ENSSLDG00000021543	xrn1	58	94.805	Seriola_lalandi_dorsalis
ENSCHOG00000013961	-	62	96.104	ENSTGUG00000008498	XRN1	61	96.104	Taeniopygia_guttata
ENSCHOG00000013961	-	52	93.506	ENSTNIG00000017615	xrn1	53	93.506	Tetraodon_nigroviridis
ENSCHOG00000013961	-	61	98.701	ENSTTRG00000012914	XRN1	61	98.701	Tursiops_truncatus
ENSCHOG00000013961	-	59	98.701	ENSUAMG00000001608	XRN1	61	98.507	Ursus_americanus
ENSCHOG00000013961	-	59	98.701	ENSUMAG00000013625	XRN1	58	98.701	Ursus_maritimus
ENSCHOG00000013961	-	59	98.701	ENSVPAG00000004690	XRN1	58	98.701	Vicugna_pacos
ENSCHOG00000013961	-	59	98.701	ENSVVUG00000024461	XRN1	58	98.701	Vulpes_vulpes
ENSCHOG00000013961	-	56	96.104	ENSXETG00000000619	xrn1	55	96.104	Xenopus_tropicalis
ENSCHOG00000013961	-	52	94.805	ENSXCOG00000007917	xrn1	55	94.805	Xiphophorus_couchianus
ENSCHOG00000013961	-	52	94.805	ENSXMAG00000018320	xrn1	58	94.805	Xiphophorus_maculatus