EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000000162 (Gene tree)
Gene ID: 100182449
Gene Symbol: -
Alias: -
Full Name: methylthioribose-1-phosphate isomerase-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2442 bases
Position: chrHT000596.1:247-2688
Accession: 100182449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000000274	IF-2B	PF01008.17	3.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000000274	-	704	XM_002126218	ENSCINP00000000274	196 (aa)	XP_002126254	F6ZGV0

Gene Model

Click here to download ENSCING00000000162's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00270	Cysteine and methionine metabolism	KEGG
cin01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000000162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000000162	-	99	53.266	ENSG00000037757	MRI1	54	53.769	Homo_sapiens
ENSCING00000000162	-	99	56.923	ENSAPOG00000009673	mri1	54	56.923	Acanthochromis_polyacanthus
ENSCING00000000162	-	93	47.368	ENSAMEG00000012918	MRI1	56	47.030	Ailuropoda_melanoleuca
ENSCING00000000162	-	99	56.410	ENSACIG00000009199	mri1	54	56.410	Amphilophus_citrinellus
ENSCING00000000162	-	96	58.201	ENSAOCG00000009931	mri1	53	58.201	Amphiprion_ocellaris
ENSCING00000000162	-	96	58.201	ENSAPEG00000013553	mri1	53	58.201	Amphiprion_percula
ENSCING00000000162	-	96	58.201	ENSATEG00000019410	mri1	53	58.201	Anabas_testudineus
ENSCING00000000162	-	99	53.030	ENSACAG00000003475	MRI1	55	53.030	Anolis_carolinensis
ENSCING00000000162	-	99	53.266	ENSANAG00000020896	-	54	53.266	Aotus_nancymaae
ENSCING00000000162	-	99	47.236	ENSANAG00000035382	-	56	47.236	Aotus_nancymaae
ENSCING00000000162	-	99	56.410	ENSACLG00000020412	mri1	54	56.410	Astatotilapia_calliptera
ENSCING00000000162	-	99	56.923	ENSAMXG00000011982	mri1	54	56.923	Astyanax_mexicanus
ENSCING00000000162	-	93	54.545	ENSBTAG00000002524	MRI1	50	53.769	Bos_taurus
ENSCING00000000162	-	99	39.796	WBGene00007236	C01G10.9	51	39.796	Caenorhabditis_elegans
ENSCING00000000162	-	99	52.764	ENSCJAG00000044187	MRI1	53	53.266	Callithrix_jacchus
ENSCING00000000162	-	93	51.872	ENSCAFG00000016615	MRI1	56	51.256	Canis_familiaris
ENSCING00000000162	-	93	51.872	ENSCAFG00020006659	MRI1	56	51.256	Canis_lupus_dingo
ENSCING00000000162	-	99	53.266	ENSCHIG00000019343	MRI1	55	53.769	Capra_hircus
ENSCING00000000162	-	99	52.764	ENSCPOG00000013191	MRI1	55	52.764	Cavia_porcellus
ENSCING00000000162	-	99	52.764	ENSCCAG00000014292	-	53	53.266	Cebus_capucinus
ENSCING00000000162	-	99	47.716	ENSCCAG00000035484	-	53	48.731	Cebus_capucinus
ENSCING00000000162	-	99	53.266	ENSCATG00000029747	MRI1	61	54.271	Cercocebus_atys
ENSCING00000000162	-	93	54.011	ENSCLAG00000013025	MRI1	55	52.764	Chinchilla_lanigera
ENSCING00000000162	-	99	51.220	ENSCSAG00000006463	MRI1	55	52.195	Chlorocebus_sabaeus
ENSCING00000000162	-	99	64.103	ENSCSAVG00000003107	-	55	64.103	Ciona_savignyi
ENSCING00000000162	-	99	51.515	ENSCANG00000043216	MRI1	55	52.525	Colobus_angolensis_palliatus
ENSCING00000000162	-	99	52.261	ENSCGRG00001015655	MRI1	54	52.261	Cricetulus_griseus_chok1gshd
ENSCING00000000162	-	99	52.261	ENSCGRG00000005697	MRI1	54	52.261	Cricetulus_griseus_crigri
ENSCING00000000162	-	99	55.385	ENSCSEG00000011410	mri1	54	55.385	Cynoglossus_semilaevis
ENSCING00000000162	-	99	56.923	ENSCVAG00000023215	mri1	54	56.923	Cyprinodon_variegatus
ENSCING00000000162	-	99	57.436	ENSDARG00000075754	mri1	54	57.436	Danio_rerio
ENSCING00000000162	-	93	51.075	ENSDNOG00000047045	MRI1	55	50.000	Dasypus_novemcinctus
ENSCING00000000162	-	99	51.759	ENSDORG00000010875	Mri1	55	52.261	Dipodomys_ordii
ENSCING00000000162	-	99	52.195	FBgn0039849	CG11334	56	52.195	Drosophila_melanogaster
ENSCING00000000162	-	93	50.802	ENSETEG00000017174	MRI1	63	50.754	Echinops_telfairi
ENSCING00000000162	-	99	52.551	ENSEBUG00000014184	mri1	55	52.551	Eptatretus_burgeri
ENSCING00000000162	-	92	52.717	ENSEASG00005000151	MRI1	56	51.759	Equus_asinus_asinus
ENSCING00000000162	-	92	52.717	ENSECAG00000010706	MRI1	56	51.256	Equus_caballus
ENSCING00000000162	-	99	43.655	ENSELUG00000016174	mri1	51	43.590	Esox_lucius
ENSCING00000000162	-	93	45.503	ENSFCAG00000011508	MRI1	55	46.269	Felis_catus
ENSCING00000000162	-	99	56.410	ENSFHEG00000009358	MRI1	54	56.410	Fundulus_heteroclitus
ENSCING00000000162	-	99	47.716	ENSGMOG00000002273	mri1	56	47.716	Gadus_morhua
ENSCING00000000162	-	93	44.681	ENSGALG00000034575	MRI1	54	44.681	Gallus_gallus
ENSCING00000000162	-	99	55.897	ENSGAFG00000010575	mri1	54	55.897	Gambusia_affinis
ENSCING00000000162	-	99	56.410	ENSGACG00000018995	mri1	57	56.410	Gasterosteus_aculeatus
ENSCING00000000162	-	99	54.040	ENSGAGG00000010411	MRI1	55	54.040	Gopherus_agassizii
ENSCING00000000162	-	99	53.266	ENSGGOG00000006628	MRI1	54	53.769	Gorilla_gorilla
ENSCING00000000162	-	99	56.410	ENSHBUG00000018620	mri1	54	56.410	Haplochromis_burtoni
ENSCING00000000162	-	93	52.941	ENSHGLG00000010969	MRI1	55	51.759	Heterocephalus_glaber_female
ENSCING00000000162	-	93	50.000	ENSHGLG00100007151	MRI1	54	49.000	Heterocephalus_glaber_male
ENSCING00000000162	-	96	59.259	ENSHCOG00000014695	mri1	53	59.259	Hippocampus_comes
ENSCING00000000162	-	99	56.923	ENSIPUG00000008756	mri1	54	56.923	Ictalurus_punctatus
ENSCING00000000162	-	99	52.261	ENSSTOG00000020750	MRI1	55	52.261	Ictidomys_tridecemlineatus
ENSCING00000000162	-	93	52.941	ENSJJAG00000018104	Mri1	54	52.261	Jaculus_jaculus
ENSCING00000000162	-	99	56.410	ENSKMAG00000018700	mri1	54	56.410	Kryptolebias_marmoratus
ENSCING00000000162	-	99	56.923	ENSLBEG00000004998	mri1	54	56.923	Labrus_bergylta
ENSCING00000000162	-	99	57.789	ENSLACG00000006845	MRI1	55	57.789	Latimeria_chalumnae
ENSCING00000000162	-	94	50.000	ENSLAFG00000012910	MRI1	57	50.000	Loxodonta_africana
ENSCING00000000162	-	99	52.261	ENSMFAG00000044250	MRI1	63	53.266	Macaca_fascicularis
ENSCING00000000162	-	99	52.261	ENSMMUG00000018068	MRI1	54	53.266	Macaca_mulatta
ENSCING00000000162	-	99	52.764	ENSMLEG00000035138	MRI1	54	53.769	Mandrillus_leucophaeus
ENSCING00000000162	-	96	58.730	ENSMAMG00000011686	mri1	55	58.201	Mastacembelus_armatus
ENSCING00000000162	-	99	56.410	ENSMZEG00005007657	mri1	54	56.410	Maylandia_zebra
ENSCING00000000162	-	66	61.017	ENSMAUG00000003451	Mri1	58	61.017	Mesocricetus_auratus
ENSCING00000000162	-	93	52.941	ENSMICG00000031875	MRI1	54	52.261	Microcebus_murinus
ENSCING00000000162	-	99	52.261	ENSMOCG00000009591	Mri1	54	52.261	Microtus_ochrogaster
ENSCING00000000162	-	99	51.010	ENSMODG00000011870	MRI1	56	51.010	Monodelphis_domestica
ENSCING00000000162	-	99	56.923	ENSMALG00000006021	mri1	54	56.923	Monopterus_albus
ENSCING00000000162	-	99	51.759	MGP_CAROLIEiJ_G0031299	Mri1	76	41.667	Mus_caroli
ENSCING00000000162	-	99	51.759	ENSMUSG00000004996	Mri1	76	41.667	Mus_musculus
ENSCING00000000162	-	99	51.759	MGP_PahariEiJ_G0022905	Mri1	76	41.667	Mus_pahari
ENSCING00000000162	-	99	51.759	MGP_SPRETEiJ_G0032417	Mri1	76	41.667	Mus_spretus
ENSCING00000000162	-	93	52.941	ENSMPUG00000003316	MRI1	56	52.261	Mustela_putorius_furo
ENSCING00000000162	-	99	50.754	ENSMLUG00000004766	MRI1	55	51.256	Myotis_lucifugus
ENSCING00000000162	-	94	52.910	ENSNGAG00000022102	Mri1	52	52.910	Nannospalax_galili
ENSCING00000000162	-	100	42.079	ENSNBRG00000023766	mri1	54	42.079	Neolamprologus_brichardi
ENSCING00000000162	-	99	52.764	ENSNLEG00000013138	MRI1	54	53.266	Nomascus_leucogenys
ENSCING00000000162	-	55	57.273	ENSOPRG00000008859	-	59	57.273	Ochotona_princeps
ENSCING00000000162	-	93	53.476	ENSODEG00000019755	-	54	52.261	Octodon_degus
ENSCING00000000162	-	93	53.476	ENSODEG00000010083	-	54	52.261	Octodon_degus
ENSCING00000000162	-	99	56.410	ENSONIG00000017732	mri1	54	56.410	Oreochromis_niloticus
ENSCING00000000162	-	99	53.030	ENSOANG00000012399	MRI1	61	53.030	Ornithorhynchus_anatinus
ENSCING00000000162	-	93	54.011	ENSOCUG00000024840	MRI1	55	52.764	Oryctolagus_cuniculus
ENSCING00000000162	-	99	56.410	ENSORLG00000011911	mri1	54	56.410	Oryzias_latipes
ENSCING00000000162	-	99	56.410	ENSORLG00020005135	MRI1	54	56.410	Oryzias_latipes_hni
ENSCING00000000162	-	99	56.410	ENSORLG00015003701	MRI1	54	56.410	Oryzias_latipes_hsok
ENSCING00000000162	-	99	56.410	ENSOMEG00000013120	mri1	59	56.410	Oryzias_melastigma
ENSCING00000000162	-	99	52.736	ENSOGAG00000007183	MRI1	55	52.736	Otolemur_garnettii
ENSCING00000000162	-	86	52.047	ENSPPAG00000033346	MRI1	51	52.047	Pan_paniscus
ENSCING00000000162	-	93	51.337	ENSPPRG00000006539	MRI1	54	51.256	Panthera_pardus
ENSCING00000000162	-	93	51.337	ENSPTIG00000005216	MRI1	56	51.256	Panthera_tigris_altaica
ENSCING00000000162	-	99	53.266	ENSPTRG00000010563	MRI1	54	53.769	Pan_troglodytes
ENSCING00000000162	-	99	52.764	ENSPANG00000010977	MRI1	54	53.769	Papio_anubis
ENSCING00000000162	-	99	42.564	ENSPKIG00000003387	mri1	51	42.564	Paramormyrops_kingsleyae
ENSCING00000000162	-	99	56.410	ENSPMGG00000016429	mri1	54	56.410	Periophthalmus_magnuspinnatus
ENSCING00000000162	-	99	51.256	ENSPEMG00000006105	Mri1	54	51.759	Peromyscus_maniculatus_bairdii
ENSCING00000000162	-	99	58.163	ENSPMAG00000006128	mri1	55	58.163	Petromyzon_marinus
ENSCING00000000162	-	99	51.256	ENSPCIG00000019032	MRI1	56	51.256	Phascolarctos_cinereus
ENSCING00000000162	-	99	55.897	ENSPFOG00000004311	mri1	54	55.897	Poecilia_formosa
ENSCING00000000162	-	99	56.410	ENSPLAG00000010852	mri1	54	56.410	Poecilia_latipinna
ENSCING00000000162	-	99	55.897	ENSPMEG00000014113	mri1	54	55.897	Poecilia_mexicana
ENSCING00000000162	-	99	54.082	ENSPREG00000000422	mri1	56	54.082	Poecilia_reticulata
ENSCING00000000162	-	99	52.525	ENSPPYG00000010570	MRI1	54	52.525	Pongo_abelii
ENSCING00000000162	-	99	53.266	ENSPCAG00000014275	MRI1	55	53.266	Procavia_capensis
ENSCING00000000162	-	92	53.514	ENSPCOG00000021500	MRI1	61	52.792	Propithecus_coquereli
ENSCING00000000162	-	99	51.759	ENSPVAG00000006322	MRI1	54	51.759	Pteropus_vampyrus
ENSCING00000000162	-	99	56.410	ENSPNYG00000001542	mri1	54	56.410	Pundamilia_nyererei
ENSCING00000000162	-	99	57.436	ENSPNAG00000012506	mri1	54	57.436	Pygocentrus_nattereri
ENSCING00000000162	-	99	52.261	ENSRNOG00000026211	Mri1	54	52.764	Rattus_norvegicus
ENSCING00000000162	-	99	52.261	ENSRROG00000031188	MRI1	54	53.266	Rhinopithecus_roxellana
ENSCING00000000162	-	99	39.207	YPR118W	-	54	39.207	Saccharomyces_cerevisiae
ENSCING00000000162	-	99	42.640	ENSSBOG00000029825	-	54	42.640	Saimiri_boliviensis_boliviensis
ENSCING00000000162	-	92	52.973	ENSSBOG00000034840	-	61	52.284	Saimiri_boliviensis_boliviensis
ENSCING00000000162	-	99	51.256	ENSSHAG00000011531	MRI1	56	51.256	Sarcophilus_harrisii
ENSCING00000000162	-	96	57.979	ENSSFOG00015018651	mri1	58	57.979	Scleropages_formosus
ENSCING00000000162	-	96	58.730	ENSSMAG00000004636	mri1	53	58.730	Scophthalmus_maximus
ENSCING00000000162	-	99	56.410	ENSSDUG00000002275	mri1	54	56.410	Seriola_dumerili
ENSCING00000000162	-	99	56.410	ENSSLDG00000012900	mri1	54	56.410	Seriola_lalandi_dorsalis
ENSCING00000000162	-	99	52.261	ENSSARG00000007904	MRI1	55	52.764	Sorex_araneus
ENSCING00000000162	-	100	54.271	ENSSPUG00000002937	MRI1	60	54.271	Sphenodon_punctatus
ENSCING00000000162	-	99	56.410	ENSSPAG00000008235	mri1	54	56.410	Stegastes_partitus
ENSCING00000000162	-	99	53.266	ENSSSCG00000013756	MRI1	50	53.266	Sus_scrofa
ENSCING00000000162	-	99	57.436	ENSTRUG00000010929	mri1	54	57.436	Takifugu_rubripes
ENSCING00000000162	-	96	56.614	ENSTNIG00000014065	mri1	53	56.614	Tetraodon_nigroviridis
ENSCING00000000162	-	93	39.247	ENSTBEG00000008620	MRI1	63	38.889	Tupaia_belangeri
ENSCING00000000162	-	93	54.545	ENSTTRG00000010347	MRI1	55	53.769	Tursiops_truncatus
ENSCING00000000162	-	93	52.406	ENSUAMG00000015405	MRI1	56	51.759	Ursus_americanus
ENSCING00000000162	-	92	52.174	ENSUMAG00000004743	MRI1	53	52.717	Ursus_maritimus
ENSCING00000000162	-	93	51.872	ENSVVUG00000026734	MRI1	51	51.256	Vulpes_vulpes
ENSCING00000000162	-	99	49.500	ENSXETG00000021867	mri1	56	49.500	Xenopus_tropicalis
ENSCING00000000162	-	98	55.440	ENSXCOG00000014431	mri1	57	55.440	Xiphophorus_couchianus
ENSCING00000000162	-	99	55.897	ENSXMAG00000027505	MRI1	54	55.897	Xiphophorus_maculatus